Contig 009439:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011N20Sequence519009439 (9)113023322
JMFF015N09Sequence557009439 (9)dbj|BAD18102.1|3e-06leucine-rich repeat receptor-like kinase [Ipomoea batatas]753012674 (9)dbj|BAD18097.1|2e-115putative serine/threonine protein kinase [Ipomoea batatas]
JMFF026F15Sequence578009439 (9)dbj|BAD18102.1|7e-17leucine-rich repeat receptor-like kinase [Ipomoea batatas]733012674 (9)dbj|BAD18097.1|2e-105putative serine/threonine protein kinase [Ipomoea batatas]
JMSF006L15Sequence377009439 (9)325012674 (9)dbj|BAD18097.1|1e-10putative serine/threonine protein kinase [Ipomoea batatas]
JMSF025J12Sequence630009439 (9)dbj|BAD18102.1|2e-24leucine-rich repeat receptor-like kinase [Ipomoea batatas]793012674 (9)dbj|BAD18097.1|7e-158putative serine/threonine protein kinase [Ipomoea batatas]
JMSF033L24Sequence635009439 (9)dbj|BAD18102.1|9e-24leucine-rich repeat receptor-like kinase [Ipomoea batatas]638012674 (9)dbj|BAD18097.1|1e-40putative serine/threonine protein kinase [Ipomoea batatas]
JMSF039C16Sequence406009439 (9)dbj|BAD18102.1|3e-33leucine-rich repeat receptor-like kinase [Ipomoea batatas]
JMSF041N05Sequence793009439 (9)dbj|BAD18102.1|2e-87leucine-rich repeat receptor-like kinase [Ipomoea batatas]628012674 (9)dbj|BAD18097.1|5e-87putative serine/threonine protein kinase [Ipomoea batatas]
JMSF043E02Sequence703009439 (9)dbj|BAD18102.1|4e-45leucine-rich repeat receptor-like kinase [Ipomoea batatas]690012674 (9)dbj|BAD18097.1|3e-67putative serine/threonine protein kinase [Ipomoea batatas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF041N05+ TGCTGGGTATATCACCATTGAATTTGTTGTTGGAAAGATCGAGGGTNTGAAGCCTTT
                      ____________________________________________________________
consensus TGCTGGGTATATCACCATTGAATTTGTTGTTGGAAAGATCGAGGGTNTGAAGCCTTT
 
. : . : . : . : . : . :
JMSF041N05+ NTAATTTCCCGATTTCAGCTGGAATATGTCCTGAAATAGCATTGTTTTGCAGCAACACAG
                      ____________________________________________________________
consensus NTAATTTCCCGATTTCAGCTGGAATATGTCCTGAAATAGCATTGTTTTGCAGCAACACAG
 
. : . : . : . : . : . :
JMSF041N05+ ACTGCAAGTTTGTTAAGTTGCCAATTCCAGGTGACAAGGTCCCTGATAAACTCTGGCTGG
                      ____________________________________________________________
consensus ACTGCAAGTTTGTTAAGTTGCCAATTCCAGGTGACAAGGTCCCTGATAAACTCTGGCTGG
 
. : . : . : . : . : . :
JMSF039C16+ CCCAAAGCAGAAACATAGCCNTCGGGGGAACAGGTGNCCATTCTCCAACTGCAGG
JMSF041N05+ GTAGTCCCAAGGCAGACACATAGCCATCAGGTGAACAGGTAACCATTCTCCAACTGCAGG
JMSF043E02+ CCCAAGGCAGACACATAGCCATCAGGTGAACAGGTAACCATTCTCCAACTGCAGG
                      ____________________________________________________________
consensus GTAGTCCCAAGGCAGACACATAGCCATCAGGTGAACAGGTAACCATTCTCCAACTGCAGG
 
. : . : . : . : . : . :
JMSF039C16+ GGTCTACAGAATTAACATCCCAGTTCTCCAGAACATTGTAAGGATCATGTAAAGAGGTCT
JMSF041N05+ GGTCTACAGAGTTAACATCCCAATTTTCCAGAACATTGTAAGGGTCATGTAAACCAGTCT
JMFF026F15+ TAAGGGTCATGTAAACCAGTCT
JMSF043E02+ GGTNTACAGAGTTAACATCCCAATTTTCCAGAACATTGTAAGGGTCATGTAAACCAGTCT
JMSF025J12+ CAGAACATTGTAAGGGTCATGTAAACCAGTCT
JMSF033L24+ CAGAACATTGTAAGGGTCATGTAAACCAGTCT
                      ____________________________________________________________
consensus GGTCTACAGAGTTAACATCCCAATTTTCCAGAACATTGTAAGGGTCATGTAAACCAGTCT
 
. : . : . : . : . : . :
JMSF039C16+ TTATAGCCATCAAAGCAACCACTTCATAGTTTACACCAGTAGGGGAAAGAGTAGCA
JMSF041N05+ TTATAGCAATCAAAGCCACCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
JMFF026F15+ TTATAGCAATCAAAGCCACCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
JMSF043E02+ TTATAGCAATCAAAGCCACCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
JMSF025J12+ TTATAGCAATCAAAGCCACCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
JMFF015N09+ ACCCCAGATGGTGAAAGAGTAGCAGAAC
JMSF033L24+ TTATAGCAATCAAAGCCANCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
                      ____________________________________________________________
consensus TTATAGCAATCAAAGCCACCACTTCATAGTTCACCCCAGATGGTGAAAGAGTAGCAGAAC
 
. : . : . : . : . : . :
JMSF041N05+ AAGAAGTGGCTATTAACATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
JMFF026F15+ AAGAAGTGGCTATTAACATCCAAATCCCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
JMSF043E02+ AAGAAGTGGCTATTAACATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
JMSF025J12+ AAGAAGTGGCTATTAACATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
JMFF015N09+ AAGAAGTGGCTATTAACATCCAAATCCCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
JMFF011N20+ ATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACTAC
JMSF033L24+ AAGAAGTGGCTATTAACATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
                      ____________________________________________________________
consensus AAGAAGTGGCTATTAACATCCAAAT-CCCCAAGCCCAGAACTTTGAATAGCAGAAACCAC
 
. : . : . : . : . : . :
JMSF041N05+ TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
JMFF026F15+ TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
JMSF043E02+ TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
JMSF025J12+ TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
JMFF015N09+ TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
JMFF011N20+ TCCCTTTCCATAATCTACCTTTTTTTGTTTACGTTATTCTTGTATTAAGAAAAATACCCT
JMSF033L24+ TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
                      ____________________________________________________________
consensus TCCCTTTCCATAATCTACCTTTTTTTGTTTATGTTATTCTTGTATTAAGAAAAATACCCT
 
. : . : . : . : . : . :
JMSF041N05+ CTCAGCAAAACCATAACTCTTAACAAAACATAACATGAAGCAAAGCAGCCATACTTGCTC
JMFF026F15+ CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMSF043E02+ CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMSF025J12+ CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMFF015N09+ CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMSF006L15+ AAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMFF011N20+ CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
JMSF033L24+ CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
                      ____________________________________________________________
consensus CTCAGCAAAACCATAACTCTTAACAAAACATAACATCAAGCAAAGCAGCCATACTTGCTC
 
. : . : . : . : . : . :
JMSF041N05+ ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMFF026F15+ ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMSF043E02+ ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMSF025J12+ ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMFF015N09+ ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMSF006L15+ ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMFF011N20+ ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
JMSF033L24+ ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
                      ____________________________________________________________
consensus ATCCCATCCAAGCAAGCAAACCCAGCTTGTAAGCATAATCCACCATTACCATTACCAATA
 
. : . : . : . : . : . :
JMSF041N05+ CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMFF026F15+ CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMSF043E02+ CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMSF025J12+ CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMFF015N09+ CCAATCAAGAAACACNTGGGAAAAGTGCCCAGAAGNTAAAACTATCTATCTTTGCACGAC
JMSF006L15+ CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMFF011N20+ CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
JMSF033L24+ CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
                      ____________________________________________________________
consensus CCAATCAAGAAACACCTGGGAAAAGTGCCCAGAAGCTAAAACTATCTATCTTTGCACGAC
 
. : . : . : . : . : . :
JMSF041N05+ TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMFF026F15+ TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMSF043E02+ TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMSF025J12+ TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMFF015N09+ TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMSF006L15+ TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMFF011N20+ TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
JMSF033L24+ TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
                      ____________________________________________________________
consensus TAAGCTTGAATATGGGCAGACAGCAGAAAACCCAGCAAGAAGAAAAACAGAATTTTCTTG
 
. : . : . : . : . : . :
JMSF041N05+ AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMFF026F15+ AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMSF043E02+ AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMSF025J12+ AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMFF015N09+ AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTNTA
JMSF006L15+ AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMFF011N20+ AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
JMSF033L24+ AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
                      ____________________________________________________________
consensus AGAAACTAATCCAGAAATTCTGGGAGCCTAGAGATCTATCTATCTATCTGGAGATTTCTA
 
. : . : . : . : . : . :
JMSF041N05+ TTTCTAACAGATACCC
JMFF026F15+ TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
JMSF043E02+ TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
JMSF025J12+ TTTCTAACAGATACCCAGGAATTCCATCTTCTTCCTCTTCCCCTTACGTTTCACCACACC
JMFF015N09+ TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
JMSF006L15+ TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
JMFF011N20+ TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
JMSF033L24+ TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
                      ____________________________________________________________
consensus TTTCTAACAGATACCCAGGAATTCCATCTTCTTCTTCTTCCCCTTACGTTTCACCACACC
 
. : . : . : . : . : . :
JMFF026F15+ GATGCTCTCTCCTCTC
JMSF043E02+ GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCA
JMSF025J12+ GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCACACCATCATCT
JMFF015N09+ GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCACAC
JMSF006L15+ GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTC
JMFF011N20+ GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCACACCATCATCT
JMSF033L24+ GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCACACCATCATCTCCC
                      ____________________________________________________________
consensus GATGCTCTCTCCTCTCACCAGTCGCCACCATATCCTCTCAAGATCACACCATCATCTCCC