Contig 009323:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022P17Sequence630009323 (4)ref|XP_009788398.1|1e-32PREDICTED: uncharacterized protein LOC104236215 isoform X2 [Nicotiana sylvestri713001426 (4)ref|XP_004236832.1|370PREDICTED: uncharacterized protein LOC101261219 [Solanum lycopersicum]
JMSF035A22Sequence708009323 (4)ref|XP_009788397.1|5e-40PREDICTED: uncharacterized protein LOC104236215 isoform X1 [Nicotiana sylvestri610001426 (4)ref|XP_006359309.1|115PREDICTED: uncharacterized protein LOC102597261 [Solanum tuberosum]
JMSF035L21Sequence650009323 (4)ref|XP_009788397.1|2e-33PREDICTED: uncharacterized protein LOC104236215 isoform X1 [Nicotiana sylvestri644001426 (4)ref|XP_006359309.1|97.8PREDICTED: uncharacterized protein LOC102597261 [Solanum tuberosum]
JMSF047B19Sequence689009323 (4)ref|XP_009788397.1|1e-36PREDICTED: uncharacterized protein LOC104236215 isoform X1 [Nicotiana sylvestri799001426 (4)ref|XP_004236832.1|187PREDICTED: uncharacterized protein LOC101261219 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF047B19+ GCCCTGTACGTATAAACCCCACGAGTACCCTT
JMSF035A22+ CTTCCCATGGCCTTCCTGCCCTGTACGTATAAACCCCACGAGTACCCTT
                      ____________________________________________________________
consensus CTTCCCATGGCCTTCCTGCCCTGTACGTATAAACCCCACGAGTACCCTT
 
. : . : . : . : . : . :
JMSF047B19+ CCATGGGCTATTCCCGGCAGCCACCCCGTGAGCTACAACCCGAGTCTTAAAATAAAACCT
JMSF035A22+ CCATGGGCTATTCCCGGCAGCCACCCCGTGAGCTACAACCCGAGTCTTAAAATAAAACCT
JMSF035L21+ ATTCCCGGCAGCCACCCCGTGAGCTACAACCCGAGTCTTAAAATAAAACCT
JMSF022P17+ AGCTACAACCCGAGTCTTAAAATAAAACCT
                      ____________________________________________________________
consensus CCATGGGCTATTCCCGGCAGCCACCCCGTGAGCTACAACCCGAGTCTTAAAATAAAACCT
 
. : . : . : . : . : . :
JMSF047B19+ GGCGGATTCAAGGCCACAGCGGAGCAGCGCAGCATCTTCGGCACCGAGCTCAATCACTGC
JMSF035A22+ GGCGGATTCAAGGCCACAGCGGAGCAGCGCAGCATCTTCGGCACCGAGCTCAATCACTGC
JMSF035L21+ GGCGGATTCAAGGCCACAGCGGAGCAGCGCAGCATCTTCGGCACCGAGCTCAATCACTGC
JMSF022P17+ GGCGGATTCAAGGCCACAGCGGAGCAGCGCAGCATCTTCGGCACCGAGCTCAATCACTGC
                      ____________________________________________________________
consensus GGCGGATTCAAGGCCACAGCGGAGCAGCGCAGCATCTTCGGCACCGAGCTCAATCACTGC
 
. : . : . : . : . : . :
JMSF047B19+ GGCATTGTGCCTCATCAGCGAGCTAGACAAGGCATCCACGGCACGCAAATAGCCCCCCGC
JMSF035A22+ GGCATTGTGCCTCATCAGCGAGCTAGACAAGGCATCCACGGCACGCAAATAGCCCCCCGC
JMSF035L21+ GGCATTGTGCCTCATCAGCGAGCTAGACAAGGCATCCACGGCACGCAAATAGCCCCCCGC
JMSF022P17+ GGCATTGTGCCTCATCAGCGAGCTAGACAAGGCATCCACGGCACGCAAATAGCCCCCCGC
                      ____________________________________________________________
consensus GGCATTGTGCCTCATCAGCGAGCTAGACAAGGCATCCACGGCACGCAAATAGCCCCCCGC
 
. : . : . : . : . : . :
JMSF047B19+ AGGAGCACCGTCGTAGGGCAGAATATCAGAAAGCTTAACCCTTGCCAAAGGCTGAAGCGG
JMSF035A22+ AGGAGCACCGTCGTAGGGCAGAATATCAGAAAGCTTAACCCTTGCCAAAGGCTGAAGCGG
JMSF035L21+ AGGAGCACCGTCGTAGGGCAGAATATCAGAAAGCTTAACCCTTGCCAAAGGCTGAAGCGG
JMSF022P17+ AGGAGCACCGTCGTAGGGCAGAATATCAGAAAGCTTAACCCTTGCCAAAGGCTGAAGCGG
                      ____________________________________________________________
consensus AGGAGCACCGTCGTAGGGCAGAATATCAGAAAGCTTAACCCTTGCCAAAGGCTGAAGCGG
 
. : . : . : . : . : . :
JMSF047B19+ GATAGCACCAAACTCCCCAGGTGGGTGTGCTTGAGCCATTGGCAACGCAATTACATTATC
JMSF035A22+ GATCGCACCAAACTCCCCAGGTGGGTGTGCTTGAGCCATTGGCAACGCAATTACATTATC
JMSF035L21+ GATCGCACCAAACTCCCCAGGTGGGTGTGCTTGAGCCATTGGCAACGCAATTACATTATC
JMSF022P17+ GATCGCACCAAACTCCCCAGGTGGGTGTGCTTGAGCCATTGGCAACGCAATTACATTATC
                      ____________________________________________________________
consensus GATCGCACCAAACTCCCCAGGTGGGTGTGCTTGAGCCATTGGCAACGCAATTACATTATC
 
. : . : . : . : . : . :
JMSF047B19+ CCGCCCCAGAGAAAGCGGAAAAGTCGAAGGAAACTGAGCGGCGATGGGGACGGCGGCGGT
JMSF035A22+ CCGCCCCAGAGAAAGCGGAAAAGTCGAAGGAAACTGAGCGGCGATGGGGACGGCGGCGGT
JMSF035L21+ CCGCCCCAGAGAAAGCGGAAAAGTCGAAGGAAACTGAGCGGCGATGGGGACGGCGGCGGT
JMSF022P17+ CCGCCCCAGAGAAAGCGGAAAAGTCGAAGGAAACTGAGCGGCGATGGGGACGGCGGCGGT
                      ____________________________________________________________
consensus CCGCCCCAGAGAAAGCGGAAAAGTCGAAGGAAACTGAGCGGCGATGGGGACGGCGGCGGT
 
. : . : . : . : . : . :
JMSF047B19+ GGCGGATCTAAGAGAGGAGGCGGATGAAGGTGGAGGTGGCGGAGTCGACTGGTGATGCTG
JMSF035A22+ GGCGGATCTAAGAGAGGAGGCGGATGAAGGTGGAGGTGGCGGAGTCGACTGGTGATGCTG
JMSF035L21+ GGCGGATCTAAGAGAGGAGGCGGATGAAGGTGGAGGTGGCGGAGTCGACTGGTGATGCTG
JMSF022P17+ GGCGGATCTAAGAGAGGAGGCGGATGAAGGTGGAGGTGGCGGAGTCGACTGGTGATGCTG
                      ____________________________________________________________
consensus GGCGGATCTAAGAGAGGAGGCGGATGAAGGTGGAGGTGGCGGAGTCGACTGGTGATGCTG
 
. : . : . : . : . : . :
JMSF047B19+ ATGCATCGCGAGCATAACAATCTACCATGTCTGTGCGTAGCATATACACACATACATATA
JMSF035A22+ ATGCATCGCGAGCATAACAATCTACCATGTCTGTGCGTAGCATATACACACATACATATA
JMSF035L21+ ATGCATCGCGAGCATAACAATCTACCATGTCTGTGCGTAGCATATACACACATACATATA
JMSF022P17+ ATGCATCGCGAGCATAACAATCTACCATGTCTGTGCGTAGCATATACACACATACATATA
                      ____________________________________________________________
consensus ATGCATCGCGAGCATAACAATCTACCATGTCTGTGCGTAGCATATACACACATACATATA
 
. : . : . : . : . : . :
JMSF047B19+ CAATACAAAATCGACGACGATGATTTCTGTATTGGGGGAGAGATTTTAGGGTTTTGGTAG
JMSF035A22+ CAATACAAAATCGGCGACGATGATTTCTGTATTGGGGGAGAGATTTTAGGGTTTTGGTAG
JMSF035L21+ CAATACAAAATCGACGACGATGATTTCTGTATTGGGGGAGAGATTTTAGGGTTTTGGTAG
JMSF022P17+ CAATACAAAATCGACGACGATGATTTCTGTATTGGGGGAGAGATTTTAGGGTTTTGGTAG
                      ____________________________________________________________
consensus CAATACAAAATCGACGACGATGATTTCTGTATTGGGGGAGAGATTTTAGGGTTTTGGTAG
 
. : . : . : . : . : . :
JMSF047B19+ AATGAAAAAAGGAGCCTTTCTCAACGGGATTCAGAAACGAGAAATTCCAGTGAGAAAAAT
JMSF035A22+ AATGAAAAAAGGAGCCTTTCTCAACGGGATTCAGAAACGAGAAATTCCAGTGAGAAAAAT
JMSF035L21+ AATGAAAAAAGGAGCCTTTCTCAACGGGATTCAGAAACGAGAAATTCCAGTGAGAAAAAT
JMSF022P17+ AATGAAAAAAGGAGCCTTTCTCAACGGGATTCAGAAACGAGAAATTCCAGTGAGAAAAAT
                      ____________________________________________________________
consensus AATGAAAAAAGGAGCCTTTCTCAACGGGATTCAGAAACGAGAAATTCCAGTGAGAAAAAT
 
. : . : . : . : . : . :
JMSF047B19+ AGTACTACTCCACTCGAAGTCTTTTCAGCGTTCCTAAAGAAAATCTAAAACACCCCC
JMSF035A22+ AGTACTACTCCACTCGAAGTCTTTTCAGCGTTCCTAAAGAAAATCTAAAACACCCCC
JMSF035L21+ AGTACTACTCCACTCGAAGTCTTTTCAGCGTTCCTAAAGAAAATCTAAAACACCCCC
JMSF022P17+ AGTACTACTCCACTCGAAGTCTTTTCAGCGTTCCTAAAGAAAATCTAAAACACCCCCACC
                      ____________________________________________________________
consensus AGTACTACTCCACTCGAAGTCTTTTCAGCGTTCCTAAAGAAAATCTAAAACACCCCCACC