| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006M24 | Sequence | 564 | 009154 (12) | emb|CDP02673.1| | 9e-34 | unnamed protein product [Coffea canephora] | 708 | 010524 (11) | gb|AAM12952.1| | 1e-68 | auxin-regulated protein [Zinnia violacea] |
| JMFF007E20 | Sequence | 550 | 009154 (12) | emb|CDP02673.1| | 3e-30 | unnamed protein product [Coffea canephora] | 741 | 010524 (11) | gb|AAM12952.1| | 1e-69 | auxin-regulated protein [Zinnia violacea] |
| JMFF011H17 | Sequence | 586 | 009154 (12) | ref|XP_007205358.1| | 2e-44 | hypothetical protein PRUPE_ppa007194mg [Prunus persica] ref|XP_007205359.1| hypo | 755 | 010524 (11) | gb|AAM12952.1| | 2e-74 | auxin-regulated protein [Zinnia violacea] |
| JMFF026C18 | Sequence | 543 | 009154 (12) | emb|CDP02673.1| | 2e-30 | unnamed protein product [Coffea canephora] | 770 | 010524 (11) | gb|AAM12952.1| | 4e-58 | auxin-regulated protein [Zinnia violacea] |
| JMFF034H24 | Sequence | 601 | 009154 (12) | ref|XP_007205358.1| | 4e-37 | hypothetical protein PRUPE_ppa007194mg [Prunus persica] ref|XP_007205359.1| hypo | 533 | 010524 (11) | gb|ADN34477.1| | 1e-28 | auxin influx carrier [Arachis hypogaea] |
| JMFF051L06 | Sequence | 501 | 009154 (12) | emb|CDP02673.1| | 2e-30 | unnamed protein product [Coffea canephora] | |||||
| JMFS007H10 | Sequence | 635 | 009154 (12) | ref|XP_007205358.1| | 1e-37 | hypothetical protein PRUPE_ppa007194mg [Prunus persica] ref|XP_007205359.1| hypo | |||||
| JMSF001F19 | Sequence | 424 | 009154 (12) | ref|XP_008236708.1| | 1e-05 | PREDICTED: auxin-responsive protein IAA9 [Prunus mume] ref|XP_008236714.1| PREDI | 775 | 010524 (11) | gb|AAM12952.1| | 8e-85 | auxin-regulated protein [Zinnia violacea] |
| JMSF002F19 | Sequence | 425 | 009154 (12) | ref|XP_008236708.1| | 1e-05 | PREDICTED: auxin-responsive protein IAA9 [Prunus mume] ref|XP_008236714.1| PREDI | 731 | 010524 (11) | gb|AAM12952.1| | 5e-84 | auxin-regulated protein [Zinnia violacea] |
| JMSF030D01 | Sequence | 671 | 009154 (12) | ref|XP_007205358.1| | 5e-43 | hypothetical protein PRUPE_ppa007194mg [Prunus persica] ref|XP_007205359.1| hypo | |||||
| JMSF034A07 | Sequence | 676 | 009154 (12) | ref|XP_007205358.1| | 6e-33 | hypothetical protein PRUPE_ppa007194mg [Prunus persica] ref|XP_007205359.1| hypo | 758 | 010524 (11) | gb|AAM12952.1| | 2e-82 | auxin-regulated protein [Zinnia violacea] |
| JMSF050C10 | Sequence | 675 | 009154 (12) | ref|XP_007205358.1| | 1e-46 | hypothetical protein PRUPE_ppa007194mg [Prunus persica] ref|XP_007205359.1| hypo | 772 | 010524 (11) | gb|AAM12952.1| | 4e-103 | auxin-regulated protein [Zinnia violacea] |
This contig is upended
. : . : . : . : . : . :
JMFF011H17+ CTGAGGCACGTTCGATTTGATCCCTGCACTGCTACCAAA
____________________________________________________________
consensus CTGAGGCACGTTCGATTTGATCCCTGCACTGCTACCAAA
. : . : . : . : . : . :
JMFF011H17+ ATTTCCTTGTCCAGCTGACTGAGGAGTGTGAGAATCAGATTTGGGAATAGTAAACATCCA
JMFS007H10+ TGTCCAGCTGACTGAGGAGTGTGAGAATCAGA-TTGGGAATAGTAAACATCCA
JMFF034H24+ GAATCAGATTTGGGAATAGTAAACATCCA
JMSF030D01+ TTCCTTGTCCAGCTGACTGAGGAGTGTGAGAATCAGATTTGGGAATAGTAAACATCCA
JMSF050C10+ TTCCTTGTCCAGCTGACTGAGGAGTGTGAGAATCAGATTTGGGAATAGTAAACATCCA
JMSF034A07+ TTCCTTGTCCAGCTGACTGAGGAGTGTGAGAATCAGATTTGGGAATAGTAAACATCCA
____________________________________________________________
consensus ATTTCCTTGTCCAGCTGACTGAGGAGTGTGAGAATCAGATTTGGGAATAGTAAACATCCA
. : . : . : . : . : . :
JMFF011H17+ ATTTGCCTCAGTGGTCACAGAGCCTTCCATGGTATCCAAGAATCCTCTTTTGTTCCCAGT
JMFS007H10+ ATTTGCCTCAGTGGTCACAGAGCCTTCCATGGTATCCAAGAATCCTCTTTTGTTCCCAGT
JMFF034H24+ ATTTGCCTCAGTGGTCACAGAGCCTTCCATGGTATCCAAGAATCCTCTTTTGTTCCCAGT
JMSF030D01+ ATTTGCCTCAGTGGTCACAGAGCCTTCCATGGTATCCAAGAATCCTCTTTTGTTCCCAGT
JMSF050C10+ ATTTGCCTCAGTGGTCACAGAGCCTTCCATGGTATCCAAGAATCCTCTTTTGTTCCCAGT
JMFF006M24+ CCATGGTATCCAAGAATCCTCTTTTGTTCCCAGT
JMSF034A07+ ATTTGCCTCAGTGGTCACAGAGCCTTCCATGGTATCCAAGAATCCTCTTTTGTTCCCAGT
JMFF026C18+ CAGT
JMFF007E20+ CAGT
____________________________________________________________
consensus ATTTGCCTCAGTGGTCACAGAGCCTTCCATGGTATCCAAGAATCCTCTTTTGTTCCCAGT
. : . : . : . : . : . :
JMFF011H17+ GAAAGAAGCCTTGACAGAAGAAAAGATTCCATCTTTTGAAGGAAGCAAAGGAAACAAAGG
JMFS007H10+ GAAAGAAGCCTTGACAGAAGAAAAGATTCCATCTTTTGAAGGAAGCAAAGGAAACAAAGG
JMFF034H24+ GAAAGAAGCCTTGACAGAAGAAAAGATTCCATCTTTTGAAGGAAGCAAAGGAAACAAAGG
JMSF030D01+ GAAAGAAGCCTTGACAGAAGAAAAGATTCCATCTTTTGAAGGAAGCAAAGGAAACAAAGG
JMSF050C10+ GAAAGAAGCCTTGACAGAAGAAAAGATTCCATCTTTTGAAGGAAGCAAAGGAAACAAAGG
JMFF006M24+ GAAAGAAGCCTTGACAGAAGAAAAGATTCCATCTTTTGAAGGAAGCAAAGGAAACAAAGG
JMSF034A07+ GAAAGAAGCCTTGACAGAAGAAAAGATTCCATCTTTTGAAGGAAGCAAAGGAAACAAAGG
JMFF026C18+ GAAAGAAGCCTTGACAGAAGAAAAGATTCCATCTTTTGAAGGAAGCAAAGGAAACAAAGG
JMFF051L06+ GAAAGAAGCCTTGACAGAAGAAAAGATTCCATCTTTTGAAGGAAGCAAAGGAAACAAAGG
JMFF007E20+ GAAAGAAGCCTTGACAGAAGAAAAGATTCCATCTTTTGAAGGAAGCAAAGGAAACAAAGG
____________________________________________________________
consensus GAAAGAAGCCTTGACAGAAGAAAAGATTCCATCTTTTGAAGGAAGCAAAGGAAACAAAGG
. : . : . : . : . : . :
JMFF011H17+ CTTTTCATCAAATTTTCCGGTGCTTGGCCCATTAAGTTCTAAATCTCGCTTGGGAGATTG
JMFS007H10+ CTTTTCATCAAATTTTCCGGTGCTTGGCCCATTAAGTTCTAAATCTCGCTTGGGAGATTG
JMFF034H24+ CTTTTCATCAAATTTTCCGGTGCTTGGCCCATTAAGTTCTAAATCTCGCTTGGGAGATTG
JMSF030D01+ CTTTTCATCAAATTTTCCGGTGCTTGGCCCATTAAGTTCTAAATCTCGCTTGGGAGATTG
JMSF050C10+ CTTTTCATCAAATTTTCCGGTGCTTGGCCCATTAAGTTCTAAATCTCGCTTGGGAGATTG
JMFF006M24+ CTTTTCATCAAATTTTCCGGTGCTTGGCCCATTAAGTTCTAAATCTCGCTTGGGAGATTG
JMSF034A07+ CTTTTCATCAAATTTTCCGGTGCTTGGCCCAT----TTCTAAATCTCGCTTGGGAGATTG
JMFF026C18+ CTTTTCATCAAATTTTCCGGTGCTTGGCCCATTAAGTTCTAAATCTCGCTTGGGAGATTG
JMFF051L06+ CTTTTCATCAAATTTTCCGGTGCTTGGCCCATTAAGTTCTAAATCTCGCTTGGGAGATTG
JMFF007E20+ CTTTTCATCAAATTTTCCGGTGCTTGGCCCATTAAGTTCTAAATCTCGCTTGGGAGATTG
____________________________________________________________
consensus CTTTTCATCAAATTTTCCGGTGCTTGGCCCATTAAGTTCTAAATCTCGCTTGGGAGATTG
. : . : . : . : . : . :
JMFF011H17+ AGATCCAGGGAGACCAAGCCTTAACTCTGTAGCTTTAAGATTCAATCTGTCCTTTTCATT
JMFS007H10+ AGATCCAGGGAGACCAAGCCTTAACTCTGTAGCTTTAAGATTCAATCTGTCCTTTTCATT
JMFF034H24+ AGATCCAGGGAGACCAAGCCCTAACTCTGTAGCTTTAAGATTCAATCTGTCCTTTTCATT
JMSF030D01+ AGATCCAGGGAGACCAAGCCTTAACTCTGTAGCTTTAAGATTCAATCTGTCCTTTTCATT
JMSF050C10+ AGATCCAGGGAGACCAAGCCTTAACTCTGTAGCTTTAAGATTCAATCTGTCCTTTTCATT
JMFF006M24+ AGATCCAGGGAGACCAAGCCTTAACTCTGTAGCTTTAAGATTCAATCTGTCCTTTTCATT
JMSF034A07+ AGATCCAGGGAGACCAAGCCTTAACTCTGTAGCTTTAAGATTCAATCTGTCCTTTTCATT
JMFF026C18+ AGATCCAGGGAGACCAAGCCTTAACTCTGTAGCTTTAAGATTCAATCTGTCCTTTTCATT
JMFF051L06+ AGATCCAGGGAGACCAAGCCTTAACTCTGTAGCTTTAAGATTCAATCTGTCCTTTTCATT
JMFF007E20+ AGATCCAGGGAGACCAAGCCTTAACTCTGTAGCTTTAAGATTCAATCTGTCCTTTTCATT
JMSF002F19+ TCATT
JMSF001F19+ CATT
____________________________________________________________
consensus AGATCCAGGGAGACCAAGCCTTAACTCTGTAGCTTTAAGATTCAATCTGTCCTTTTCATT
. : . : . : . : . : . :
JMFF011H17+ CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
JMFS007H10+ CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
JMFF034H24+ CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
JMSF030D01+ CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
JMSF050C10+ CACGACACCGAAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
JMFF006M24+ CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
JMSF034A07+ CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
JMFF026C18+ CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
JMFF051L06+ CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
JMFF007E20+ CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
JMSF002F19+ CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
JMSF001F19+ CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
____________________________________________________________
consensus CACGACACCGGAGGCCGCACTGCTGTCCACTGAAGAAGAATCAGACAAACCTAGGTAGTT
. : . : . : . : . : . :
JMFF011H17+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
JMFS007H10+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
JMFF034H24+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
JMSF030D01+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
JMSF050C10+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
JMFF006M24+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
JMSF034A07+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
JMFF026C18+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
JMFF051L06+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
JMFF007E20+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
JMSF002F19+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
JMSF001F19+ GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
____________________________________________________________
consensus GCGCTCTTTTAGTGCCGAGCCCGTCTGAGAAATGCAGTCCAACGTTGATGAGGAAGCCAT
. : . : . : . : . : . :
JMFF011H17+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATAT-AAAA
JMFS007H10+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
JMFF034H24+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
JMSF030D01+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
JMSF050C10+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
JMFF006M24+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
JMSF034A07+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
JMFF026C18+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
JMFF051L06+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
JMFF007E20+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
JMSF002F19+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
JMSF001F19+ TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
____________________________________________________________
consensus TACTGAACCATTACCCTGCCCTTCACCCAATATTGTTGGGGACATCATATCATATAAAAA
. : . : . : . : . : . :
JMFF011H17+ CTCGAGTTCGTCTCTCAACCTGCTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
JMFS007H10+ CTCGAGTTCGTCTCTCAACCTGCTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
JMFF034H24+ CTCGAGTTCGTCTCTCAAC---CTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
JMSF030D01+ CTCGAGTTCGTCTCTCAACCTGCTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
JMSF050C10+ CTCGAGTTCGTCTCTCAACCTGCTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
JMFF006M24+ CTCGAGTTCGTCTCTCAAC---CTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
JMSF034A07+ CTCGAGCTCGTCTCTCAACCTGCTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
JMFF026C18+ CTCGAGTTCGTCTCTCAACCTGCTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
JMFF051L06+ CTCGAGTTCGTCTCTCAACCTGCTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
JMFF007E20+ CTCGAGTTCGTCTCTCAACCTGCTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
JMSF002F19+ CTCGAGTTCGTCTCTCAACCTGCTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
JMSF001F19+ CTCGAGTTCGTCTCTCAACCTGCTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
____________________________________________________________
consensus CTCGAGTTCGTCTCTCAACCTGCTTGAGATTACAACAAGAAGTTGAAAGATTGAAGCTGG
. : . : . : . : . : . :
JMFF011H17+ TAATCACT
JMFS007H10+ TAATCACTGAAAGGGAGAAAGAAAATCAAAGAGAGAGAGATAGAGAGAAATAGAGAAGAA
JMFF034H24+ TAATCACTGAAAGGGAGAAAGAAAATCAAAGAGAGAGAGATAGAGAGAAATAGAGAAGAA
JMSF030D01+ TAATCACTGAAAGGGAGAAAGAAAATCAAAGAGAGAGAGATAGAGAGAAATAGAGAAGAA
JMSF050C10+ TAATCACTGAAAGGGAGAAAGAAAATCAAAGAGAGAGAGATAGAGAGAAATAGAGAAGAA
JMFF006M24+ TAATCACTGAAAGGGAGAAAGAAAATCAAAGAGAGAGAGATAGAGAGAAATAGAGAAGAA
JMSF034A07+ TAATCACTGAAAGGGAGAAAGAAAATCAAAGAGAGAGAGATAGAGAGAAATAGAGAAGAA
JMFF026C18+ TAATCACTGAAAGGGAGAAAGAAAATCAAAGGGAGAGAGATAGAGAGAAATAGAGAAGAA
JMFF051L06+ TAATCACTGAAAGGGAGAAAGAAAATCAAAGAGAGAGAGATAGAGAGAAATAGAGAAGAA
JMFF007E20+ TAATCACTGAAAGGGAGAAAGAAAATCAAAGAGAGAGAGATAGAGAGAAATAGAGAAGAA
JMSF002F19+ TAATCACTGAAAGGGAGAAAGAAAATCAAAGAGAGAGAGATAGAGAGAAATAGAGAAGAA
JMSF001F19+ TAATCACTGAAAGGGAGAAAGAAAATCAAAGAGAGAGAGATAGAGAGAAATAGAGAAGAA
____________________________________________________________
consensus TAATCACTGAAAGGGAGAAAGAAAATCAAAGAGAGAGAGATAGAGAGAAATAGAGAAGAA
. : . : . : . : . : . :
JMFS007H10+ GGCGTCAAGGTCCCTCCATTAACCAGAGAGGCAACAAAAGTGT
JMFF034H24+ GGCGTCAAGGTCCCTCCATTAACCAGAGAGGCAAC
JMSF030D01+ GGCGTCAAGGTCCCTCCATTAACCAGAGAGGCAACAAAAGTGTGAGAGAGGTGTTTGC
JMSF050C10+ GGCGTCAAGGTCCCTCCATTAACCAGAGAGGCAACAAAAGTGTGAGAGAGGTGTTTG
JMFF006M24+ GGCGTCAAGGTCCCTCCATTAACCAGAGAGGCAAC
JMSF034A07+ GGCGTCAAGGTCCCTCCATTAACCAGAGAGGCAACAAAAGTGTGAGAGAGGTGTTTGCCG
JMFF026C18+ GGCGTCAAGGTCCCTCCATTAACCAGAGAGGCAACAAAAGTGTGAGAGAGGTGTTTGCC
JMFF051L06+ GGCGTCAAGGTCCCTCCATT
JMFF007E20+ GGCGTCAAGGTCCCTCCATTAACCAGAGAGGCAACAAAAGTGTGAGAGAGGTGTTTGCCG
JMSF002F19+ GGCGTCAAGGTCCCTCCATTAACCAGAGAGGCAACAAAAGTGTGAGAGAGGTGTTTGCCG
JMSF001F19+ GGCGTCAAGGTCCCTCCATTAACCAGAGAGGCAACAAAAGTGTGAGAGAGGTGTTTGCCG
____________________________________________________________
consensus GGCGTCAAGGTCCCTCCATTAACCAGAGAGGCAACAAAAGTGTGAGAGAGGTGTTTGCCG
. : . : . : . : . : . :
JMSF034A07+ AG
JMFF007E20+ AG
JMSF002F19+ AGAAACCCGAAGGCGAAGAAGCTGAAGGGGAGAAACCAAAAAAGTATGGGGGCAAAAACC
JMSF001F19+ AGAAACCCGAAGGCGAAGAAGCTGAAGGGGAGAAACCAAAAAAGTATGGGGGCAAAAACC
____________________________________________________________
consensus AGAAACCCGAAGGCGAAGAAGCTGAAGGGGAGAAACCAAAAAAGTATGGGGGCAAAAACC