Contig 008785:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008H18Sequence592008785 (7)ref|XP_009609674.1|2e-42PREDICTED: dicarboxylate transporter 1, chloroplastic [Nicotiana tomentosiformi757002843 (7)ref|XP_004142115.1|3e-94PREDICTED: dicarboxylate transporter 1, chloroplastic-like [Cucumis sativus] gb
JMFF014K14Sequence592008785 (7)ref|XP_004250945.1|7e-48PREDICTED: dicarboxylate transporter 1, chloroplastic [Solanum lycopersicum]668002843 (7)ref|XP_009777235.1|7e-90PREDICTED: dicarboxylate transporter 1, chloroplastic [Nicotiana sylvestris]
JMFF022M02Sequence491008785 (7)ref|XP_010102341.1|9e-232-oxoglutarate/malate translocator [Morus notabilis] gb|EXB93302.1| 2-oxoglutara544002843 (7)ref|XP_006850217.1|3e-57hypothetical protein AMTR_s00022p00253280 [Amborella trichopoda] gb|ERN11798.1|
JMFF033C03Sequence297008785 (7)606002843 (7)ref|XP_009777235.1|9e-90PREDICTED: dicarboxylate transporter 1, chloroplastic [Nicotiana sylvestris]
JMFF037J19Sequence534008785 (7)ref|XP_010102341.1|3e-302-oxoglutarate/malate translocator [Morus notabilis] gb|EXB93302.1| 2-oxoglutara733002843 (7)ref|XP_004162089.1|2e-90PREDICTED: dicarboxylate transporter 1, chloroplastic-like [Cucumis sativus]
JMFF047N03Sequence614008785 (7)ref|XP_004250945.1|3e-53PREDICTED: dicarboxylate transporter 1, chloroplastic [Solanum lycopersicum]602002843 (7)ref|XP_009777235.1|5e-71PREDICTED: dicarboxylate transporter 1, chloroplastic [Nicotiana sylvestris]
JMSF020J10Sequence688008785 (7)ref|XP_004250945.1|4e-64PREDICTED: dicarboxylate transporter 1, chloroplastic [Solanum lycopersicum]757002843 (7)ref|XP_004162089.1|8e-90PREDICTED: dicarboxylate transporter 1, chloroplastic-like [Cucumis sativus]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF020J10+ AATCGCCG
                      ____________________________________________________________
consensus AATCGCCG
 
. : . : . : . : . : . :
JMSF020J10+ GCGCTAACAGAGCCTCGCTGAATACCAAACTGTAGCCGAGCCCCAGGGAGGAGCTGCCGA
                      ____________________________________________________________
consensus GCGCTAACAGAGCCTCGCTGAATACCAAACTGTAGCCGAGCCCCAGGGAGGAGCTGCCGA
 
. : . : . : . : . : . :
JMSF020J10+ AGAGCGAGACGAACTGGTAGGCGATTCTGTTGCCCAGCCCGGTCTTGATAAACCCCCGGG
JMFF047N03+ G
                      ____________________________________________________________
consensus AGAGCGAGACGAACTGGTAGGCGATTCTGTTGCCCAGCCCGGTCTTGATAAACCCCCGGG
 
. : . : . : . : . : . :
JMSF020J10+ CGAAGAAGAACGCGAGCGCGATTAGCCAGGGGATGGGGTCGCCGAACGCGGAAAACGCGG
JMFF014K14+ GAACGCGAGCGCGATTAGCCAGGGGATGGGGTCGCCGAACGCGGAAAACGCGG
JMFF047N03+ CGAAGAAGAACGCGAGCGCGATTAGCCAGGGGATGGGGTCGCCGAACGCGGAAAACGCGG
JMFF008H18+ GAACGCGAGCGCGATTAGCCAGGGGATGGGGTCGCCGAACGCGGAAAACGCGG
                      ____________________________________________________________
consensus CGAAGAAGAACGCGAGCGCGATTAGCCAGGGGATGGGGTCGCCGAACGCGGAAAACGCGG
 
. : . : . : . : . : . :
JMSF020J10+ CGGCGAACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
JMFF014K14+ CGGCGAACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
JMFF047N03+ CGGCGAACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
JMFF037J19+ AACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
JMFF008H18+ CGGCGAACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
JMFF022M02+ ACGCGACGGCGC
                      ____________________________________________________________
consensus CGGCGAACGTGAGAGTTTTTGTCAGCACGCACGCGCCGAGGCCCATCAACGCGACGGCGC
 
. : . : . : . : . : . :
JMSF020J10+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
JMFF014K14+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
JMFF047N03+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
JMFF037J19+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
JMFF008H18+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
JMFF022M02+ CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
                      ____________________________________________________________
consensus CGAGCGGCAGCGGCTGGGTGATGATTCCCACGATGGTGGCCAGGAAAATCGACAGCAACT
 
. : . : . : . : . : . :
JMSF020J10+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
JMFF014K14+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
JMFF047N03+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
JMFF037J19+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
JMFF008H18+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
JMFF022M02+ GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
                      ____________________________________________________________
consensus GCCACGCGTTCCGGGAAACCCCGCCGGGCTGCGGGACGAACCAGAGAATCACCCCCGTCG
 
. : . : . : . : . : . :
JMSF020J10+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
JMFF033C03+ GGCGCGGCGC
JMFF014K14+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
JMFF047N03+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
JMFF037J19+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
JMFF008H18+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
JMFF022M02+ CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
                      ____________________________________________________________
consensus CGATGGACGCCAGAAGCGGCTTAATCGCAGCGCCTTGCCACGGCTGAGCCGGCGCGGCGC
 
. : . : . : . : . : . :
JMSF020J10+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF033C03+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF014K14+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF047N03+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF037J19+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF008H18+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
JMFF022M02+ CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
                      ____________________________________________________________
consensus CACCGGCGGCGGGGGCCGTGGAAGCTCCGGAAGCTGAGGCCTTTACTATATGATGCAACC
 
. : . : . : . : . : . :
JMSF020J10+ GCTTCACATTGTTTCTTTCATGGTTCTTGAGCCCGGGAGTAATAAGGAGCTCGGTTTTCG
JMFF033C03+ GCTTCACATTGTTTCTTTCATGGTTCTTGAGCCCGGGAGTAATAAGGAGCTCGGTTTTNG
JMFF014K14+ GCTTCACATTGTTTCTTTCATGGTTCTTGAGCCCGGGAGTAATAAGGAGCTCGGTTTTCG
JMFF047N03+ GCTTCACATTGTTTCTTTCATGGTTCTTGAGCCCGGGAGTAATAAGGAGCTCGGTTTTCG
JMFF037J19+ GCTTCACATTGTTTCTTTCATGGTTCTTGAG-CCGGGAGTAATAAGGAGCTCGGTTTTCG
JMFF008H18+ GCTTCACATTGTTTCTTTCATGGTTCTTGAG-CCGGGAGTAATAAGGAGCTCGGTTTTCG
JMFF022M02+ GCTTCACATTGTTTCTTTCATGGTTCTTGAG-CCGGGAGTAATAAGGAGCTCGGTTTTCG
                      ____________________________________________________________
consensus GCTTCACATTGTTTCTTTCATGGTTCTTGAGCCCGGGAGTAATAAGGAGCTCGGTTTTCG
 
. : . : . : . : . : . :
JMSF020J10+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF033C03+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF014K14+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF047N03+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF037J19+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF008H18+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
JMFF022M02+ CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
                      ____________________________________________________________
consensus CAGATTTAAGGTTGAATTGGAGGGGGCGATGGAAGGAGAGACGGTGTGGCCGGAAACGGG
 
. : . : . : . : . : . :
JMSF020J10+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF033C03+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF014K14+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF047N03+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF037J19+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF008H18+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
JMFF022M02+ GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
                      ____________________________________________________________
consensus GGTTCACGGCGGAGGTGACGGCCAAAGACGCCATCACGGCGATGGCAGTCCGGGGGAGTG
 
. : . : . : . : . : . :
JMSF020J10+ GAGGTGAGTGGCTAAGGAC
JMFF033C03+ GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGA
JMFF014K14+ GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGACTGATTCAAATGAT
JMFF047N03+ GAGGTGAGTGGCTAAGGACAGAGCAATCTTAGTGAGTGATAGAGACTGATTCAAATGAT
JMFF037J19+ GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGACTGATTCAAATGAT
JMFF008H18+ GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGACTGATTCAAATGAT
JMFF022M02+ GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGACTGATTCAAATGATT
                      ____________________________________________________________
consensus GAGGTGAGTGGCTAAGGACAGAGCAATCCTAGTGAGTGATAGAGACTGATTCAAATGATT