Contig 008578:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003L20Sequence331003624 (4)718008578 (3)emb|CDP20930.1|4e-13unnamed protein product [Coffea canephora]
JMSF016F18Sequence540003624 (4)752008578 (3)emb|CDP20930.1|5e-18unnamed protein product [Coffea canephora]
JMSF033K16Sequence654003624 (4)748008578 (3)emb|CDP20930.1|5e-18unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016F18+ GACTCTGGTATGGCTTCAATTGCCTCTGCTACC
rJMSF033K16+ TGGTATGGCTTCAATTGCNTCTGCTACC
                      ____________________________________________________________
consensus GACTCTGGTATGGCTTCAATTGCCTCTGCTACC
 
. : . : . : . : . : . :
rJMSF016F18+ CATTCATTTGTTCGATTTTGATGTGTTATCTCGCATATGTGAACCAATTGGAAGATTGGT
rJMSF003L20+ TTCANTTGTTCGATTTTGATGTGTTATCTCGCATATGTGAACCAATTGGAAGATTGGT
rJMSF033K16+ CATTCATTTGTTCGATTTTGATGTGTTATCTCGCATATGTGAACCAATTGGAAGATTGGT
                      ____________________________________________________________
consensus CATTCATTTGTTCGATTTTGATGTGTTATCTCGCATATGTGAACCAATTGGAAGATTGGT
 
. : . : . : . : . : . :
rJMSF016F18+ AGAGTTTGGTTCGGCCACAATCAGACGAACTAGGCCAAATGTGGCAAAGGTGAGGATTGA
rJMSF003L20+ AGAGTTTGGTTCGGCCACAATCAGACGAACTAGGCCAAATGTGGCAAAGGTGAGGATTGA
rJMSF033K16+ AGAGTTTGGTTCGGCCACAATCAGACGAACTAGGCCAAATGTGGCAAAGGTGAGGATTGA
                      ____________________________________________________________
consensus AGAGTTTGGTTCGGCCACAATCAGACGAACTAGGCCAAATGTGGCAAAGGTGAGGATTGA
 
. : . : . : . : . : . :
rJMSF016F18+ AATCGATGTGTATAAATCTGTTTTTGATCGCATTTGGTTTGAATTTGGTGAAGGAGGAGG
rJMSF003L20+ AATCGATGTGTATAAATCTGTTTTTGATCGCATTTGGATTGAATTTGGTGAAGGAGGAGG
rJMSF033K16+ AATCGATGTGTATAAATCTGTTTTTGATCGCATTTGGATTGAATTTGGTGAAGGAGGAGG
                      ____________________________________________________________
consensus AATCGATGTGTATAAATCTGTTTTTGATCGCATTTGGATTGAATTTGGTGAAGGAGGAGG
 
. : . : . : . : . : . :
rJMSF016F18+ TTTGGATGGGTTTTGGCAGAAAGTAGAGGTGGAAAGACTACCGAATTTTTGTGTTGCATG
rJMSF003L20+ TTTGGATGGGTTTTGGCAGAAAGTAGAGGTGGAAAGACTACCGAATTTTTGTGTTGCATG
rJMSF033K16+ TTTGGATGGGTTTTGGCAGAAAGTAGAGGTGGAAAGACTACCGAATTTTTGTGTTGCATG
                      ____________________________________________________________
consensus TTTGGATGGGTTTTGGCAGAAAGTAGAGGTGGAAAGACTACCGAATTTTTGTGTTGCATG
 
. : . : . : . : . : . :
rJMSF016F18+ TAGCCGGTTTGGTCACCTGGTGGGGAATTGCAAGCAAACTGAGGTGAGGTTAAGAAGAAG
rJMSF003L20+ TAGCCGGTTTGGTCACCTGGTGGGGAATTGCAAGCAAACTGAGGTGAGGTTAAGAAGAAG
rJMSF033K16+ TAGCCGGTTTGGTCACCTGGTGGGGAATTGCAAGCAAACTGAGGTGAGGTTAAGAAGAAG
                      ____________________________________________________________
consensus TAGCCGGTTTGGTCACCTGGTGGGGAATTGCAAGCAAACTGAGGTGAGGTTAAGAAGAAG
 
. : . : . : . : . : . :
rJMSF016F18+ AGAAGAAAGGGGCACATCACTTACTTGTAAAAATGTCCCAATGACTCCTGGAGTTATAAG
rJMSF003L20+ AGAAGAAAGGGGCACATCACTTACTTGTAAAAATGTCCCAATGACTCCTGGAGTTATAAG
rJMSF033K16+ AGAAGAAAGGGGCACATCACTTACTTGTAAAAATGTCCCAATGACTCCTGGAGTTATAAG
                      ____________________________________________________________
consensus AGAAGAAAGGGGCACATCACTTACTTGTAAAAATGTCCCAATGACTCCTGGAGTTATAAG
 
. : . : . : . : . : . :
rJMSF016F18+ AAAGGAAGATGGCCAAACACCTAATGTGGATGATTCAGGCCAAGGTACAGAAAAAGTAGA
rJMSF003L20+ AAAGGAAGATGGCCAAACACCTAATGTGGATGATTCAGGCCAAGGTACAGAAAAAGTAGA
rJMSF033K16+ AAAGGAAGATGGCCAAACACCTAATGTGGATGATTCAGGCCAAGGTACAGAAAAAGTAGA
                      ____________________________________________________________
consensus AAAGGAAGATGGCCAAACACCTAATGTGGATGATTCAGGCCAAGGTACAGAAAAAGTAGA
 
. : . : . : . : . : . :
rJMSF016F18+ AGCTGATATAAGCTTTAAGGACAATGAGATGAAGAGCCCTAATCAGAGGGGTCTTGTCAC
rJMSF003L20+ AGCTGATATAAGCTTTAAGGACAATGAGATGAAGAGCCCTAATCAGAGGGGTCTTGTCAC
rJMSF033K16+ AGCTGATATAAGCTTTAAGGACAATGAGATGAAGAGCCCTAATCAGAGGGGTCTTGTCAC
                      ____________________________________________________________
consensus AGCTGATATAAGCTTTAAGGACAATGAGATGAAGAGCCCTAATCAGAGGGGTCTTGTCAC
 
. : . : . : . : . : . :
rJMSF016F18+ AGAAATTGTCAAACTAGCTTGAAGCAAACTGACCCTTGTGAAGCATAAATATATGTTGTA
rJMSF003L20+ AGAAATTGTCAAACTAGCTTGAAGCAAACTGACCCTTGTGAAGCATAAATATATGTTGTA
rJMSF033K16+ AGAAATTGTCAAACTAGCTTGAAGCAAACTGACCCTTGTGAAGCATAAATATATGTTGTA
                      ____________________________________________________________
consensus AGAAATTGTCAAACTAGCTTGAAGCAAACTGACCCTTGTGAAGCATAAATATATGTTGTA
 
. : . : . : . : . : . :
rJMSF016F18+ AGTAGTTCTAAAAGGAAGCTGGCTCAGGCTGCTGAGTCTCCTGAGTTGAGGCCTAATCTG
rJMSF003L20+ AGTAGTTCTAAAAGGAAGCTGGCTCAGGCTGCTGAGTCTCCTGAGTTGAGGCCTAATCTG
rJMSF033K16+ AGTAGTTCTAAAAGGAAGCTGGCTCAGGCTGCTGAGTCTCCTGAGTTGAGGCCTAATCTG
                      ____________________________________________________________
consensus AGTAGTTCTAAAAGGAAGCTGGCTCAGGCTGCTGAGTCTCCTGAGTTGAGGCCTAATCTG
 
. : . : . : . : . : . :
rJMSF016F18+ GAAGCAAAATTGGCATCATTAGCAAGTGAAGAATTTACCAGCATCATCATTCTCATATTA
rJMSF003L20+ GAAGCAAAATTGGCATCATTAGCAAGTGAAGAATTTACCAGCATCATCATTCTCATATTA
rJMSF033K16+ GAAGCAAAATTGGCATCATTAGCAAGTGAAGAATTTACCAGCATCATCATTCTCATATTA
                      ____________________________________________________________
consensus GAAGCAAAATTGGCATCATTAGCAAGTGAAGAATTTACCAGCATCATCATTCTCATATTA
 
. : . : . : . : . : . :
rJMSF016F18+ TTGCTTCTATTAGCATTTTCTATTCTCTCTTTAGTAC
rJMSF003L20+ TTGCTTCTATTAGCATTTTCTATTCTCTCTTTAGTAC
rJMSF033K16+ TTGCTTCTATTAGCATTTTCTATTCTCTCTTTAGTACCTTCTCACAGATTGTTAGAAAAT
                      ____________________________________________________________
consensus TTGCTTCTATTAGCATTTTCTATTCTCTCTTTAGTACCTTCTCACAGATTGTTAGAAAAT