| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014O10 | Sequence | 572 | 000711 (8) | ref|XP_009802381.1| | 2e-73 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana sylvestris] | 778 | 008398 (7) | gb|AAL86326.1| | 5e-96 | putative phosphatidylinositol 3-kinase [Arabidopsis thaliana] |
| JMFF029H11 | Sequence | 579 | 000711 (8) | ref|XP_009605436.1| | 2e-68 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana tomentosiform | 762 | 008398 (7) | ref|XP_009802381.1| | 3e-91 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana sylvestris] |
| JMFF041P21 | Sequence | 635 | 000291 (2) | ref|XP_006350224.1| | 4e-82 | PREDICTED: phosphatidylinositol 3-kinase, root isoform-like [Solanum tuberosum] | 630 | 008398 (7) | dbj|BAD94035.1| | 3e-71 | phosphatidylinositol 3-kinase [Arabidopsis thaliana] |
| JMFF050O21 | Sequence | 615 | 000291 (2) | ref|XP_006350224.1| | 9e-78 | PREDICTED: phosphatidylinositol 3-kinase, root isoform-like [Solanum tuberosum] | 359 | 008398 (7) | gb|AFW62055.1| | 8e-06 | hypothetical protein ZEAMMB73_811721 [Zea mays] |
| JMSF001G14 | Sequence | 410 | 000711 (8) | ref|XP_009802381.1| | 1e-24 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana sylvestris] | 619 | 008398 (7) | dbj|BAD94035.1| | 2e-78 | phosphatidylinositol 3-kinase [Arabidopsis thaliana] |
| JMSF018M13 | Sequence | 240 | 000711 (8) | ref|XP_002267769.2| | 7e-05 | PREDICTED: phosphatidylinositol 3-kinase, root isoform isoform X1 [Vitis vinife | 744 | 008398 (7) | gb|AAL86326.1| | 3e-96 | putative phosphatidylinositol 3-kinase [Arabidopsis thaliana] |
| JMSF045G21 | Sequence | 719 | 000711 (8) | ref|XP_009802381.1| | 2e-85 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Nicotiana sylvestris] | 771 | 008398 (7) | ref|XP_004236633.1| | 4e-97 | PREDICTED: phosphatidylinositol 3-kinase, root isoform [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF045G21+ TNGGCATTACATCCACATGTCTTGGAAACA
rJMFF029H11+ CA
rJMSF018M13+ CA
rJMFF014O10+ CA
____________________________________________________________
consensus TNGGCATTACATCCACATGTCTTGGAAACA
. : . : . : . : . : . :
rJMSF045G21+ TTTATTAAAAGCTGTGCTGGCTACTCAGTTATTACTTACATATTGGGTATTGGAGACAGG
rJMFF029H11+ TTTATTAAAAGCTGTGCTGGCTACTCAGTTATCACTTACATATTGGGTATTGGAGACAGG
rJMSF018M13+ TTTATTAAAAGCTGTGCTGGCTACTCAGTTATCACTTACATATTGGGTATTGGAGACAGG
rJMFF014O10+ TTTATTAAAAGCTGTGCTGGCTACTCAGTTATCACTTACATATTGGGTATTGGAGACAGG
____________________________________________________________
consensus TTTATTAAAAGCTGTGCTGGCTACTCAGTTATCACTTACATATTGGGTATTGGAGACAGG
. : . : . : . : . : . :
rJMSF045G21+ CATCTTGACAACCTTCTACTCAGAGATGATGGCAGACTATTTCATGTTGATTTTGGTTTC
rJMFF029H11+ CATCTTGACANCCTTCTACTCAGAGATGATGGCAGACTATTTCATGTTGATTTTGGTTTC
rJMSF018M13+ CATCTTGACAACCTTCTACTCAGAGATGATGGCAGACTATTTCATGTTGATTTTGGTTTC
rJMFF014O10+ CATCTTGACAACCTTCTACTCAGAGATGATGGCAGACTATTTCATGTTGATTTTGGTTTC
____________________________________________________________
consensus CATCTTGACAACCTTCTACTCAGAGATGATGGCAGACTATTTCATGTTGATTTTGGTTTC
. : . : . : . : . : . :
rJMSF045G21+ ATTTTAGGCAAAGATCCAAAGCCCTTTCCACCCCCTATGAAGCTTTGCAAAGAAATGGTT
rJMFF029H11+ ATTTTAGGCAAAGATCCAAAGCCCTTTCCACCCCCTATGAAGCTTTGCAAAGAAATGGTT
rJMSF018M13+ ATTTTAGGCAAAGATCCAAAGCCCTTTCCACCCCCTATGAAGCTTTGCAAAGAAATGGTT
rJMSF001G14+ TTTTAGGCAAAGATCCAAAGCCCTTTCCACCCCCTATGAAGCTTTGCAAAGAAATGGTT
rJMFF014O10+ ATTTTAGGCAAAGATCCAAAGCCCTTTCCACCCCCTATGAAGCTTTGCAAAGAAATGGTT
rJMFF041P21+ CCCCCTATGAAGCTTTGCAAAGAAATGGTT
____________________________________________________________
consensus ATTTTAGGCAAAGATCCAAAGCCCTTTCCACCCCCTATGAAGCTTTGCAAAGAAATGGTT
. : . : . : . : . : . :
rJMSF045G21+ GAAGCTATGGGTGGAGCAGAAAGCCAATACTACACGAGGTTCAAATCCTATTGCTGTGAA
rJMFF029H11+ GAAGCTATGGGTGGAGCAGAAAGCCAATACTACACGAGGTTCAAATCCTATTGCTGTGAA
rJMSF018M13+ GAAGCTATGGGTGGAGCAGAAAGCCAATACTACACGAGGTTCAAATCCTATTGCTGTGAA
rJMSF001G14+ GAAGCTATGGGTGGAGCAGAAAGCCAATACTACACGAGGTTCAAATCCTATTGCTGTGAA
rJMFF014O10+ GAAGCTATGGGTGGAGCAGAAAGCCAATACTACACGAGGTTCAAATCCTATTGCTGTGAA
rJMFF041P21+ GAAGCTATGGGTGGAGCAGAAAGCCAATACTACACGAGGTTCAAATCCTATTGCTGTGAA
____________________________________________________________
consensus GAAGCTATGGGTGGAGCAGAAAGCCAATACTACACGAGGTTCAAATCCTATTGCTGTGAA
. : . : . : . : . : . :
rJMSF045G21+ GCATACAATATACTCCGGAAATCAAGCAACTTAATATTGAACTTGTTTCATCTAATGGCG
rJMFF029H11+ GCATACAATATACTCCGGAAATCAAGCAACTTAATATTGAACTTGTTTCATCTAATGGCG
rJMSF018M13+ GCATACAATATACTCCGGAAATCAAGCAACTTAATATTGAACTTGTTTCATCTAATGGCG
rJMSF001G14+ GCATACAATATACTCCGGAAATCAAGCAACTTAATATTGAACTTGTTTCATCTAATGGCG
rJMFF014O10+ GCATACAATATACTCCGGAAATCAAGCAACTTAATATTGAACTTGTTTCATCTAATGGCG
rJMFF041P21+ GCATACAATATACTCCGGAAATCAAGCAACTTAATATTGAACTTGTTTCATCTAATGGCG
____________________________________________________________
consensus GCATACAATATACTCCGGAAATCAAGCAACTTAATATTGAACTTGTTTCATCTAATGGCG
. : . : . : . : . : . :
rJMSF045G21+ GGTTCCAATATCCCAGATATAGCTTCTGATCCTGAAAAAGGCATTCTTAAGCTTCAAGAG
rJMFF029H11+ GGTTCCAATATCCCAGATATAGCTTCTGATCCTGAAAAAGGCATTCTTAAGCTTCAAGAG
rJMSF018M13+ GGTTCCAATATCCCAGATATAGCTTCTGATCCTGAAAAAGGCATTCTTAAGCTTCAAGAG
rJMSF001G14+ GGTTCCAATATCCCAGATATAGCTTCTGATCCTGAAAAAGGCATTCTTAAGCTTCAAGAG
rJMFF014O10+ GGTTCCAATATCCCAGATATAGCTTCTGATCCTGAAAAAGGCATTCTTAAGCTTCAAGAG
rJMFF041P21+ GGTTCCAATATCCCAGATATAGCTTCTGATCCTGAAAAAGGCATTCTTAAGCTTCAAGAG
____________________________________________________________
consensus GGTTCCAATATCCCAGATATAGCTTCTGATCCTGAAAAAGGCATTCTTAAGCTTCAAGAG
. : . : . : . : . : . :
rJMSF045G21+ AAGTTTCGATTAGACTTGGATGATGAGGAGTGCATACATTTCTTCCAGGACCTCATCAAC
rJMFF029H11+ AAGTTTCGATTAGACTTGGATGATGAGGAGTGCATACATTTCTTCCAGGACCTCATCAAC
rJMSF018M13+ AAGTTTCGATTAGACTTGGATGATGAGGAGTGCATACATTTCTTCCAGGACCTCATCAAC
rJMSF001G14+ AAGTTTCGATTAGACTTGGATGATGAGGAGTGCATACATTTCTTCCAGGACCTCATCAAC
rJMFF014O10+ AAGTTTCGATTAGACTTGGATGATGAGGAGTGCATACATTTCTTCCAGGACCTCATCAAC
rJMFF041P21+ AAGTTTCGATTAGACTTGGATGATGAGGAGTGCATACATTTCTTCCAGGACCTCATCAAC
____________________________________________________________
consensus AAGTTTCGATTAGACTTGGATGATGAGGAGTGCATACATTTCTTCCAGGACCTCATCAAC
. : . : . : . : . : . :
rJMSF045G21+ GAGAGTGTCAGCGCATTATTCCCACAAATGGTTGAAACCATTCACCGCTGGGCACAGTAT
rJMFF029H11+ GAGAGTGTCAGCGCATTATTCCCACAAATGGTTGAAACCATTCACCGCTGGGCACAGTAT
rJMSF018M13+ GAGAGTGTCAGCGCATTATTCCCACAAATGGTTGAAACCATTCACCGCTGGGCACAGTAT
rJMSF001G14+ GAGAGTGTCAGCGCATTATTCCCACAAATGGTTGAAACCATTCACCGCTGGGCACAGTAT
rJMFF014O10+ GAGAGTGTCAGCGCATTATTCCCACAAATGGTTGAAACCATTCACCGCTGGGCACAGTAT
rJMFF041P21+ GAGAGTGTCAGCGCATTATTCCCACAAATGGTTGAAACCATTCACCGCTGGGCACAGTAT
rJMFF050O21+ AGAGTGTCAGCGCATTATTCCCACAAATGGTTGAAACCATTCACCGCTGGGCACAGTAT
____________________________________________________________
consensus GAGAGTGTCAGCGCATTATTCCCACAAATGGTTGAAACCATTCACCGCTGGGCACAGTAT
. : . : . : . : . : . :
rJMSF045G21+ TGGCGGTGATCTATGGCACAATTGTTACTTGTTAGGTTTCTGCAAAGACCACGGCTTTAT
rJMFF029H11+ TGGCGGTGATCTATGGCACAATTGTTACTTGTTAGGTTTCTGCAAAGACCACGGCTTTAT
rJMSF018M13+ TGGCGGTGATCTATGGCACAATTGTTACTTGTTAGGTTTCTGCAAAGACCACGGCTTTAT
rJMSF001G14+ TGGCGGTGATCTATGGCACAATTGTTACTTGTTAGGTTTCTGCAAAGACCACGGCTTTAT
rJMFF014O10+ TGGCGGTGATCTATGGCACAATTGTTACTTGTTAGGTTTCTGCAAAGACCACGGCTTTAT
rJMFF041P21+ TGGCGGTGATCTATGGCACAATTGTTACTTGTTAGGTTTCTGCAAAGACCACGGCTTTAT
rJMFF050O21+ TGGCGGTGATTTATGGCACAATTGTTACTTGTTAGGTTTCTGCAAAGACCACGGCTTTAT
____________________________________________________________
consensus TGGCGGTGATCTATGGCACAATTGTTACTTGTTAGGTTTCTGCAAAGACCACGGCTTTAT
. : . : . : . : . : . :
rJMSF045G21+ TAACTTCACTAGAACTTAAGTAAAAAATCCATCTGCTCACTTCCCTCTATCCCAGCTTTG
rJMFF029H11+ TAACTTCACTAGAACTTAAGTAAAAAATCCATCTGCTCACTTCCCTCTATCCCAGCTTTG
rJMSF018M13+ TAACTTCACTAGAACTTAAGTAAAAAATCCATCTGCTCACTTCCCTCTATCCCAGCTTTG
rJMSF001G14+ TAACTTCACTAGAACTTAAGTAAAAAATCCATCTGCTCACTTCCCTCTATCCCAGCTTTG
rJMFF014O10+ TAACTTCACTAGAACTTAAGTAAAAAATCCATCTGCTCACTTCCCTCTATCCCAGCTTTG
rJMFF041P21+ TAACTTCACTAGAACTTAAGTAAAAAATCCATCTGCTCACTTCCCTCTATCCCAGCTTTG
rJMFF050O21+ TAACTTCACTAGAACTTAAGTAAAAAATCCATCTGCTCACTTCCCTCTATCCCAGCTTTG
____________________________________________________________
consensus TAACTTCACTAGAACTTAAGTAAAAAATCCATCTGCTCACTTCCCTCTATCCCAGCTTTG
. : . : . : . : . : . :
rJMSF045G21+ ATATGGCTTTCTTTCTACAACTGTATATAGACTTTGTTGCCCTACTAATTGCTACACCAT
rJMFF029H11+ ATATGGCTTTCTTTCTACAACTGTATATAGACTTTGTTGCCCTACTAATTGCTACACCAT
rJMSF018M13+ ATATGGCTTTCTTTCTACAACTGTATATAGACTTTGTTGCCCTACTAATTGCTACACCAT
rJMSF001G14+ ATATGGCTTTCTTTCTACAACTGTATATAGACTTTGTTGCCCTACTAATTGCTACACCAT
rJMFF014O10+ ATATGGCTTTCTTTCTACAACTGTATATAGACTTTGTTGCCCTACTAATTGCTACACCAT
rJMFF041P21+ ATATGGCTTTCTTTCTACAACTGTATATAGACTTTGTTGCCCTACTAATTGCTACACCAT
rJMFF050O21+ ATATGGCTTTCTTTTTACAACTGTATATAGACTTTGTTGCCCTACTAATTGCTACACCAT
____________________________________________________________
consensus ATATGGCTTTCTTTCTACAACTGTATATAGACTTTGTTGCCCTACTAATTGCTACACCAT
. : . : . : . : . : . :
rJMSF045G21+ TAGTTTGAGAATATAATGTAATTATTAGTTAAAACCTTATCAGTTATACCATATCATGAA
rJMFF029H11+ TAGTTTGAGAATATAATGTAATTATTAGTTAAAACCTTATCAGTTATGCCATATCATGAA
rJMSF018M13+ TAGTTTGAGAATATAATGTAATTATTAGTTAAAACCTTATCAGTTATACCATATCATGAA
rJMSF001G14+ TAGTTTGAGAATATAATGTAATTATTAGTTAAAACCTTATCAGTTATACCATATCATGAA
rJMFF014O10+ TAGTTTGAGAATATAATGTAATTATTAGTTAAAACCTTATCAGTTATACCATATCATGAA
rJMFF041P21+ TAGTTTGAGAATATAATGTAATTATTAGTTAAAACCTTATCAGTTATACCATATCATGAA
rJMFF050O21+ TAGTTTGAGAATATAATGTAATTATTAGTTAAAACCTTATCAGTTATACCATATCATGAA
____________________________________________________________
consensus TAGTTTGAGAATATAATGTAATTATTAGTTAAAACCTTATCAGTTATACCATATCATGAA
. : . : . : . : . : . :
rJMSF045G21+ ATCACAAAAAATACTCAAATG
rJMFF029H11+ ATCACAAAAAATACTCAAATGTAATATTTAAGATTT
rJMSF018M13+ ATCACAAAAAATACTCAAAT
rJMSF001G14+ ATCACAAAAAATACTCAAAT
rJMFF014O10+ ATCACAAAAAATACTCAAATGTAATATTTAAGATTTTAGTATTATTGCCGCATT
rJMFF041P21+ ATCACAAAAAATACTCAAATGTAATATTTAAGATTTTAGTATTATTGCCGCATT
rJMFF050O21+ ATCACAAAAAATACTCAAATGTAATATTTAAGATTTTAGTATTATTGCCGCATTTCCCTC
____________________________________________________________
consensus ATCACAAAAAATACTCAAATGTAATATTTAAGATTTTAGTATTATTGCCGCATTTCCCTC