| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002G19 | Sequence | 532 | 009575 (18) | gb|ADB65927.1| | 2e-80 | cinnamate 4-hydroxylase [Ipomoea batatas] | 718 | 008375 (19) | gb|ADB65927.1| | 2e-75 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF006G16 | Sequence | 508 | 009575 (18) | gb|ADB65927.1| | 8e-77 | cinnamate 4-hydroxylase [Ipomoea batatas] | 754 | 008375 (19) | gb|ADB65927.1| | 1e-114 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF009C20 | Sequence | 492 | 009575 (18) | gb|ADY38556.1| | 2e-68 | cinnamate 4-hydroxylase, partial [Acacia mangium] gb|ADY38557.1| cinnamate 4-hyd | 649 | 008375 (19) | gb|ADB65927.1| | 9e-96 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF016A10 | Sequence | 505 | 009575 (18) | gb|ADB65927.1| | 4e-76 | cinnamate 4-hydroxylase [Ipomoea batatas] | 750 | 008375 (19) | gb|ADB65927.1| | 7e-114 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF018D11 | Sequence | 506 | 009575 (18) | gb|ADB65927.1| | 4e-76 | cinnamate 4-hydroxylase [Ipomoea batatas] | 749 | 008375 (19) | gb|ADB65927.1| | 1e-114 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF020B05 | Sequence | 266 | 009575 (18) | gb|ADB65927.1| | 3e-17 | cinnamate 4-hydroxylase [Ipomoea batatas] | 726 | 008375 (19) | gb|ADB65927.1| | 6e-119 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF020M03 | Sequence | 359 | 009575 (18) | gb|ADB65927.1| | 3e-38 | cinnamate 4-hydroxylase [Ipomoea batatas] | 589 | 008375 (19) | gb|ADB65927.1| | 4e-87 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF021O16 | Sequence | 506 | 009575 (18) | gb|ADB65927.1| | 4e-76 | cinnamate 4-hydroxylase [Ipomoea batatas] | 692 | 008375 (19) | gb|ADB65927.1| | 2e-71 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF022P02 | Sequence | 714 | 008375 (19) | gb|ADB65927.1| | 8e-115 | cinnamate 4-hydroxylase [Ipomoea batatas] | |||||
| JMFF024E16 | Sequence | 506 | 009575 (18) | gb|ADB65927.1| | 3e-74 | cinnamate 4-hydroxylase [Ipomoea batatas] | 753 | 008375 (19) | gb|ADB65927.1| | 2e-115 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF026F19 | Sequence | 386 | 009575 (18) | gb|AFR37656.1| | 1e-43 | cinnamate 4-hydroxylase, partial [Populus trichocarpa] gb|AFR37657.1| cinnamate | 802 | 008375 (19) | gb|ADB65927.1| | 5e-98 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF030K15 | Sequence | 495 | 009575 (18) | gb|ADB65927.1| | 3e-73 | cinnamate 4-hydroxylase [Ipomoea batatas] | 601 | 008375 (19) | gb|ADB65927.1| | 3e-71 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF032E11 | Sequence | 501 | 009575 (18) | gb|ADB65927.1| | 9e-75 | cinnamate 4-hydroxylase [Ipomoea batatas] | 778 | 008375 (19) | gb|ADB65927.1| | 2e-91 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF041D18 | Sequence | 657 | 009575 (18) | gb|ADB65927.1| | 1e-110 | cinnamate 4-hydroxylase [Ipomoea batatas] | 469 | 008375 (19) | gb|ADB65927.1| | 6e-42 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF048H20 | Sequence | 417 | 009575 (18) | gb|ADB65927.1| | 2e-45 | cinnamate 4-hydroxylase [Ipomoea batatas] | 311 | 008375 (19) | |||
| JMFF049L15 | Sequence | 636 | 009575 (18) | gb|ADB65927.1| | 4e-82 | cinnamate 4-hydroxylase [Ipomoea batatas] | 578 | 008375 (19) | gb|ADB65927.1| | 4e-58 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFF049N18 | Sequence | 613 | 009575 (18) | gb|ADB65927.1| | 1e-99 | cinnamate 4-hydroxylase [Ipomoea batatas] | 538 | 008375 (19) | gb|ADB65927.1| | 1e-51 | cinnamate 4-hydroxylase [Ipomoea batatas] |
| JMFS133C01 | Sequence | 387 | 008375 (19) | gb|ADB65927.1| | 1e-32 | cinnamate 4-hydroxylase [Ipomoea batatas] | |||||
| JMSF050O22 | Sequence | 581 | 009575 (18) | gb|ADB65927.1| | 1e-80 | cinnamate 4-hydroxylase [Ipomoea batatas] | 794 | 008375 (19) | gb|ADB65927.1| | 1e-112 | cinnamate 4-hydroxylase [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
rJMSF050O22+ GAGAAAGAAGCTTTCNAGCACAAAGGGCATGGACAACAACAGTN
____________________________________________________________
consensus GAGAAAGAAGCTTTCNAGCACAAAGGGCATGGACAACAACAGTN
. : . : . : . : . : . :
rJMFF020B05+ GAAATGTGCCATAGATCACATTCTTGAAGCCCAGCAAAAGGGAGAGATCAATGAGGATA
rJMSF050O22+ TGAAATGTGCCATAGATCACATTTCTGAAGCCCAGCAAAAGGGAGAGATCAATTAGGATA
rJMFF026F19+ CCAGCAAAAGGGAGAGATCAATGAGGATA
____________________________________________________________
consensus TGAAATGTGCCATAGATCACATTTTTGAAGCCCAGCAAAAGGGAGAGATCAATGAGGATA
. : . : . : . : . : . :
rJMFF020B05+ ATGTCCTTTTACATTGTTGAGAACATTAATGTTGCTGCAATTGAAACAACACTGTGGTCG
rJMSF050O22+ ATGTCC-TCTACATTGTTGAGAACATTAATGTTGCTGCAATTGAAACAACACTGTGGTCG
rJMFF016A10+ AGAACATTAATGTTGNTGCAATTGAAACAACACTGTGGTCG
rJMFF024E16+ TTGAGAACATTAATGTTGCTGCAATTGAAACAACACTGTGGTCG
rJMFF018D11+ GAACATTAATGTTGCTGCAATTGAAACAACACTGTGGTCG
rJMFF022P02+ TGAGAACATTAATGTTGCTGCAATTGAAACAACACTGTGGTCG
rJMFF006G16+ TTGAGAACATTAATGTTGCTGCAATTGAAACAACACTGTGGTCG
rJMFF026F19+ ATGTCN-TTTACATTGTTGAGAACATTAATGTTGCTGCAATTGAAACAACACTGTGGTCG
rJMFF032E11+ G
____________________________________________________________
consensus ATGTCC-TTTACATTGTTGAGAACATTAATGTTGCTGCAATTGAAACAACACTGTGGTCG
. : . : . : . : . : . :
rJMFF020B05+ ATCGAGTGGGGCATTGCAGAACTGGTTAACAA-CCCGGGGGTCCAGAAGAAGC-TTCGCG
rJMSF050O22+ ATCGAGTGGGGCATTGCAGAACTGGTTAACAA-CCCGGGGGTCCAGAAGAAGC-TTCGCG
rJMFF016A10+ ATCGAGTGGGGCATTGCAGAACTGGTTAACAA-CCCGGGGGTCCAGAAGAAGC-TTCGCG
rJMFF024E16+ ATCGAGTGGGGCATTGCAGAACTGGTTAACAA-CCCGGGGGTCCAGAAGAAGC-TTCGCG
rJMFF009C20+ TCGAGTGGGGCATTGCAGAACTGGTTAACAACCCGGGGGGTCCAGAAGAAGC-TTCGCG
rJMFF018D11+ ATCGAGTGGGGCATTGCAGAACTGGTTAACAA-CCCGGGGGTCCAGAAGAAGC-TTCGCG
rJMFF022P02+ ATCGAGTGGGGCATTGCAGAACTGGTTAACAA-CCCGGGGGTCCAGAAGAAGC-TTCGCG
rJMFF006G16+ ATCGAGTGGGGCATTGCAGAACTGGTTAACAA-CCCGGGGGTCCAGAAGAAGC-TTCGCG
rJMFF026F19+ ATCGAGTGGGGCATTGCAGAACTGGTTAACAA-CCCGGGGGTCCAGAAGAAGC-TTCGCG
rJMFF002G19+ GGTCCAGAAGAAGC-TTCGCG
rJMFF032E11+ ATCGAGTGGGGCATTGCAGAACTGGTTANCAACCCCGGGGGTCCAGAAGAAGCTTTCGCG
____________________________________________________________
consensus ATCGAGTGGGGCATTGCAGAACTGGTTAACAA-CCCGGGGGTCCAGAAGAAGC-TTCGCG
. : . : . : . : . : . :
rJMFF049N18+ CCGAGCCAGACACCCACAAA-
rJMFF020B05+ ACGAGATTGATGCAGTTCTGGGACCGGGAGCTCAGCTAACCGAGCCAGACACCCACAAA-
rJMSF050O22+ ACGAGATTGATGCAGTTCTGGGACCGGGAGCTCAGTTAACCGAGCCAGACACCCACAAAA
rJMFF016A10+ ACGAGATTGATGCAGTTCTGGGACCGGGAGCTCAGCTAACCGAGCCAGACACCCACAAA-
rJMFF024E16+ ACGAGATTGATGCAGTTCTGGGACCGGGAGCTCAGCTAACCGAGCCAGACACCCACAAA-
rJMFF009C20+ ACGAGATTGATGCAGTTCTGGGACCGGGAGCTCAGCTAACCGAGCCAGACACCCACAAA-
rJMFF018D11+ ACGAGATTGATGCAGTTCTGGGACCGGGAGCTCAGCTAACCGAGCCAGACACCCACAAA-
rJMFF022P02+ ACGAGATTGATGCAGTTNTGGGACCGGGAGCTCAGCTAACCGAGCCAGACACCCACAAA-
rJMFF006G16+ ACGAGATTGATGCAGTTNTGGGACCGGGAGCTCAGCTAACCGAGCCAGACACCCACAAA-
rJMFF026F19+ ACGAGATTGATGCAGTTCTGGGACCGGGAGCTCAGCTAACCGAGCCAGACACCCACAAAN
rJMFF002G19+ ACGAGATTGATGCAGTTCTGGGACCGGGAGCTCAGCTAACCGAGCCAGACACCCACAAAN
rJMFF020M03+ AGATTGATGCAGTTNTGGGACCGGGAGCTCAGTTANCCGAGCCAGNCACCCACAAA-
rJMFF032E11+ ACGAGATTGATGCAGTTCTGGGACCGGGAGCTCAGCTAACCGAGCCAGACACCCACAAA-
____________________________________________________________
consensus ACGAGATTGATGCAGTTCTGGGACCGGGAGCTCAGCTAACCGAGCCAGACACCCACAAA-
. : . : . : . : . : . :
rJMFF049N18+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF020B05+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMSF050O22+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF016A10+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF024E16+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF009C20+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF018D11+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF022P02+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF006G16+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF026F19+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF030K15+ GTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF002G19+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF020M03+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF032E11+ CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
rJMFF021O16+ TCAGGCCGTGATCAGAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
____________________________________________________________
consensus CTCCCATACCTTCAGGCCGTGATCAAAGAAACACTTCGTCTCAGAATGGCGATTCCTCTG
. : . : . : . : . : . :
rJMFF049N18+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF020B05+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMSF050O22+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF016A10+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF024E16+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF009C20+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF018D11+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF022P02+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF006G16+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF026F19+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF030K15+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF049L15+ CATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF002G19+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF020M03+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF032E11+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
rJMFF021O16+ CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
____________________________________________________________
consensus CTGGTCCCCCACATGAACCTCCACGACGCCAAGCTGGGAGGGTACGACATCCCTGCCGAG
. : . : . : . : . : . :
rJMFF049N18+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF020B05+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMSF050O22+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF016A10+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF024E16+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF009C20+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF018D11+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF022P02+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF006G16+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF026F19+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF030K15+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF049L15+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF041D18+ AACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF002G19+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF020M03+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF032E11+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
rJMFF021O16+ AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
____________________________________________________________
consensus AGCAAAATCTTGGTGAACGCCTGGTGGCTAGCGAACAACCCCTCGACGTGGAAGAACCCG
. : . : . : . : . : . :
rJMFF049N18+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF020B05+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMSF050O22+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF016A10+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF024E16+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF009C20+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF018D11+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF022P02+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF006G16+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF026F19+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF030K15+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF049L15+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF041D18+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAAAGGAGAAGCACGTGGAGGCGAATGGAAAC
JMFS133C01- GCACGTGGAGGCGAATGGAAAC
rJMFF002G19+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF020M03+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF032E11+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
rJMFF021O16+ GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCAAATGGAAAC
____________________________________________________________
consensus GAGGAGTTCCGCCCCGAGAGGTTCTTCGAAGAGGAGAAGCACGTGGAGGCGAATGGAAAC
. : . : . : . : . : . :
rJMFF049N18+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGTA
rJMFF020B05+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMSF050O22+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF016A10+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF024E16+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF009C20+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF018D11+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF022P02+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF006G16+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF026F19+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF030K15+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF049L15+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF041D18+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
JMFS133C01- GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF002G19+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF020M03+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF032E11+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
rJMFF021O16+ GACTTCAGATTCCTCCCGTTTGGCGTTGGTAAGAGGAGCTGCCCCGGGATCATCCTCGCA
____________________________________________________________
consensus GACTTCAGATTCCTCCCGTTTGGCGTTGGTAGGAGGAGCTGCCCCGGGATCATCCTCGCA
. : . : . : . : . : . :
rJMFF049N18+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCA
rJMFF020B05+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMSF050O22+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF016A10+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF024E16+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF009C20+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF018D11+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF022P02+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF006G16+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF026F19+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF030K15+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF049L15+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF041D18+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
JMFS133C01- TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF002G19+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF020M03+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF032E11+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
rJMFF021O16+ TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
____________________________________________________________
consensus TTGCCAATCCTCGGGATCGTGCTGGGGCGCCTGGTTCAAAACTTTGAACTCTTGCCCCCT
. : . : . : . : . : . :
rJMFF020B05+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMSF050O22+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF016A10+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF024E16+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF009C20+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF018D11+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF022P02+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF006G16+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF026F19+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF030K15+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF049L15+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF041D18+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
JMFS133C01- CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF002G19+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF020M03+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF032E11+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF021O16+ CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
rJMFF048H20+ TCCACATCTTG
____________________________________________________________
consensus CCAGGGCACTCCAAGGTGGACACCACAGAAAAGGGGGGCCAGTTCAGTCTCCACATCTTG
. : . : . : . : . : . :
rJMFF020B05+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMSF050O22+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF016A10+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF024E16+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF009C20+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF018D11+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF022P02+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF006G16+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF026F19+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF030K15+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF049L15+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF041D18+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
JMFS133C01- AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF002G19+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF020M03+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF032E11+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF021O16+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
rJMFF048H20+ AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
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consensus AAGCACTCCACCATTGTCATGAAGCCAAGGTGTTTTTAATTAACACTTGTGTTCGATCTA
. : . : . : . : . : . :
rJMFF020B05+ TTACTTTAAT
rJMSF050O22+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATT
rJMFF016A10+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
rJMFF024E16+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
rJMFF009C20+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGAT
rJMFF018D11+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
rJMFF022P02+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
rJMFF006G16+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
rJMFF026F19+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
rJMFF030K15+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
rJMFF049L15+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
rJMFF041D18+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
JMFS133C01- TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
rJMFF002G19+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
rJMFF020M03+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATG
rJMFF032E11+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
rJMFF021O16+ TTACTTTAATTTTTATGAGGTTGCGAAGGAATTTGTTTTGTTGCATGATGATGATGATTG
rJMFF048H20+ TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
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consensus TTACTTTAATTTTTATGAGGTTGTGAAGGAATTTGTTTTGTTACATGATGATGATGATTG
. : . : . : . : . : . :
rJMFF016A10+ GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAA
rJMFF024E16+ GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAA
rJMFF018D11+ GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAA
rJMFF022P02+ GATTGGATTTTCAC
rJMFF006G16+ GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAAT
rJMFF026F19+ GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAATATC
rJMFF030K15+ GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAATATCAGTT
rJMFF049L15+ GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAATATCAGTT
rJMFF041D18+ GATTGGATTT
JMFS133C01- GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAATATCAGTT
rJMFF002G19+ GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAATATCAGTT
rJMFF032E11+ GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAATATCAGTT
rJMFF021O16+ GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAATATCAGTT
rJMFF048H20+ GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAATATCAGTT
____________________________________________________________
consensus GATTGGATTTTCACCTAGCTTCTTCTACTTTTATTTATTTATAAAATAACAATATCAGTT
. : . : . : . : . : . :
rJMFF030K15+ CAATAAGACGTGAAATCCA
rJMFF049L15+ CAATAAGACGTGAAATCCATGGAA
JMFS133C01- CAAT
rJMFF002G19+ CAATAAGACGTGAAATCCATGGAATATCTATTCATCAT
rJMFF032E11+ CAATAAGACGTGAAATCCATGGAATATCTATTCATCATTAGTAGTTCAAC
rJMFF021O16+ CAATAAGACGTGAAATCCATGGAATATCTATTCATCATTAGTAGTTCAACTGCAACAAAA
rJMFF048H20+ CAATAAGACGTGAAATCCATGGAATATCTATTCATCATTAGTAGTTCAACTGCAACAAAA
____________________________________________________________
consensus CAATAAGACGTGAAATCCATGGAATATCTATTCATCATTAGTAGTTCAACTGCAACAAAA
. : . : . : . : . : . :
rJMFF021O16+ TTGCTCGTGTTTACCCAAATCATGGACAACCTCTATATATATA
rJMFF048H20+ TTGCTCGTGTTTACCCAAATCATGGACAACCTCTATATATATATATACCCTTTGGACACT
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consensus TTGCTCGTGTTTACCCAAATCATGGACAACCTCTATATATATATATACCCTTTGGACACT