Contig 007968:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023G18Sequence411007968 (9)ref|XP_004239250.1|56.2PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01692005740 (6)ref|XP_009594235.1|8e-58PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594
JMFS030D12Sequence481007968 (9)
JMFS080F07Sequence624007968 (9)ref|XP_004239250.1|78.6PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01
JMFS148H11Sequence626007968 (9)ref|XP_004239250.1|76.3PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01
JMSF024F24Sequence632007968 (9)ref|XP_010313689.1|2e-15PREDICTED: uncharacterized protein LOC101260608 isoform X1 [Solanum lycopersicu698005740 (6)ref|XP_008787377.1|96.3PREDICTED: uncharacterized protein LOC103705447 [Phoenix dactylifera]
JMSF034C12Sequence671007968 (9)ref|XP_004239250.1|104PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01749005740 (6)ref|XP_009594235.1|7e-74PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594
JMSF034J05Sequence680007968 (9)ref|XP_004239250.1|115PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01726005740 (6)ref|XP_009594235.1|7e-50PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594
JMSF035C23Sequence695007968 (9)ref|XP_004239250.1|50.1PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01607005740 (6)ref|XP_009594235.1|5e-24PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594
JMSF039A16Sequence673007968 (9)ref|XP_004239250.1|115PREDICTED: uncharacterized protein LOC101257075 [Solanum lycopersicum] ref|XP_01834005740 (6)ref|XP_009594235.1|1e-86PREDICTED: protein PAT1 homolog 1-like [Nicotiana tomentosiformis] ref|XP_009594

Alignment

This contig is upended


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JMSF024F24+                                           CTGTAACATTCAGTATCAGAGAAATGTT
JMFS080F07+                                                              AGAAATGTT
JMSF039A16+                                           CTGTAACATTCAGTATCAGAGAAATGTT
JMSF034J05+                                           CTGTAACATTCAGTATCAGAGAAATGTT
JMSF034C12+                                                       GTATCAGAGAAATGTT
                      ____________________________________________________________
consensus                                             CTGTAACATTCAGTATCAGAGAAATGTT
 
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JMSF024F24+           GATCAAGCCAGTCAGGAAGATCAGCATCTTTTGCCCAGTCAGCTGTAGATGAACTTTCCC
JMFS148H11+                    AGTCAGGAAGATCAGCATCTTNTGCCCAGTCAGCTGTAGATGAACTTTCCC
JMFS080F07+           GATCAAGCCAGTCAGGAAGATCAGCATCTTNTGCCCAGTCAGCTGTAGATGAACTTTCCC
JMSF039A16+           GATCAAGCCAGTCAGGAAGATCAGCATCTTTTGCCCAGTCAGCTGTAGATGAACTTTCCC
JMSF034J05+           GATCAAGCCAGTCAGGAAGATCAGCATCTTTTGCCCAGTCAGCTGTAGATGAACTTTCCC
JMSF034C12+           GATCAAGCCAGTCAGGAAGATCAGCATCTTTTGCCCAGTCAGCTGTAGATGAACTTTCCC
                      ____________________________________________________________
consensus             GATCAAGCCAGTCAGGAAGATCAGCATCTTTTGCCCAGTCAGCTGTAGATGAACTTTCCC
 
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JMSF024F24+           TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
JMFS148H11+           TTGAAAAAGATCCCGATCCACGGTCACCAATAACCNCAGGATGCCTTGGACCTGCAACAA
JMFS080F07+           TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
JMFF023G18+                                                                      A
JMSF039A16+           TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
JMSF034J05+           TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
JMSF034C12+           TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
                      ____________________________________________________________
consensus             TTGAAAAAGATCCCGATCCACGGTCACCAATAACCCCAGGATGCCTTGGACCTGCAACAA
 
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JMSF024F24+           CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMFS148H11+           CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMFS080F07+           CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMFF023G18+           CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMSF039A16+           CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMSF034J05+           CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMSF034C12+           CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
JMSF035C23+                     CTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
                      ____________________________________________________________
consensus             CTCTGTTCAACTTCAAAAAGGTTGTTGCTAGGTCATCTAAATCAGATAAAGATCCTAGTC
 
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JMSF024F24+           CAGATCCCTCTTCTTT-TCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMFS148H11+           CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMFS080F07+           CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMFF023G18+           CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMSF039A16+           CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMSF034J05+           CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMSF034C12+           CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
JMFS030D12+                                                                 CGCCAA
JMSF035C23+           CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
                      ____________________________________________________________
consensus             CAGATCCCTCTTCTTTCTCAAATAAATGATACTCATGCACCCCATCATCGCCACCGCCAA
 
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JMSF024F24+           ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMFS148H11+           ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMFS080F07+           ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMFF023G18+           ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMSF039A16+           ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMSF034J05+           ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMSF034C12+           ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
JMFS030D12+           ATCCTCCGGCAACGGGAGCACCGCTACTANTAGTATCCTCCCGCACCTCCTCATCCTNTA
JMSF035C23+           ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
                      ____________________________________________________________
consensus             ATCCTCCGGCAACGGGAGCACCGCTACTACTAGTATCCTCCCGCACCTCCTCATCCTCTA
 
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JMSF024F24+           AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMFS148H11+           AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMFS080F07+           AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMFF023G18+           AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMSF039A16+           AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMSF034J05+           AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMSF034C12+           AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMFS030D12+           AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
JMSF035C23+           AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
                      ____________________________________________________________
consensus             AACCGCCCAACTCAATTTCCTCCGCAATGTCCCGCCCGAAGAAGGCATATTGAGAAGCGT
 
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JMSF024F24+           TGAAAACTCCACTATC                                            
JMFS148H11+           TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMFS080F07+           TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMFF023G18+           TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMSF039A16+           TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMSF034J05+           TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMSF034C12+           TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMFS030D12+           TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
JMSF035C23+           TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
                      ____________________________________________________________
consensus             TGAAAACTCCACTATCAGAAGCGGAACTAGAGGAGTCGGTGAAGTCCTTGAAATCCCGTC
 
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JMFS148H11+           CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMFS080F07+           CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMFF023G18+           CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMSF039A16+           CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMSF034J05+           CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMSF034C12+           CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMFS030D12+           CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
JMSF035C23+           CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
                      ____________________________________________________________
consensus             CAGAGGATCTCTCCATAATCAGAAGAACAGCTAGCAAATCCGGAGCCTCAGCAACCCCTA
 
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JMFS148H11+           CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMFS080F07+           CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMFF023G18+           CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTAT           
JMSF039A16+           CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMSF034J05+           CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMSF034C12+           CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMFS030D12+           CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
JMSF035C23+           CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
                      ____________________________________________________________
consensus             CAGATTCACACACGCACACGCATACGCATACACATATACATACATCTATAGACAAAAGAA
 
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JMFS148H11+           GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
JMFS080F07+           GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGAATGGAATTCTAGGGTTCG
JMSF039A16+           GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
JMSF034J05+           GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
JMSF034C12+           GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
JMFS030D12+           GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
JMSF035C23+           GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
                      ____________________________________________________________
consensus             GTGAATATTTCACCTAATACAATAAGCGCTTTTCGTGAATGACTGGAATTCTAGGGTTCG
 
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JMFS148H11+           GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGT                         
JMFS080F07+           GCAGAAAACAGGGAT                                             
JMSF039A16+           GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGAC                
JMSF034J05+           GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGACAGTAAGT         
JMSF034C12+           GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGACAGTAAGT         
JMFS030D12+           GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGACAGTAAGTAGCGTGTAT
JMSF035C23+           GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGACAGTAAGTAGCGTGTAT
                      ____________________________________________________________
consensus             GCAGAAAACAGGGATGATGAAGGAGCAGGTAGAGTATAGAAGACAGTAAGTAGCGTGTAT
 
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JMFS030D12+           TGTAGAGTTGCAGGTAGAAATAAATATACGGTGGAGTTGAGGAGAGGAGAGGAGG     
JMSF035C23+           TGTAGAGTTGCAGGTAGAAATAAATNTACGGTGGAGTTGAGGAGAGGAGAGGAGGCTCTA
                      ____________________________________________________________
consensus             TGTAGAGTTGCAGGTAGAAATAAATATACGGTGGAGTTGAGGAGAGGAGAGGAGGCTCTA
 
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JMSF035C23+           ATGGGGTCAACGAAAGTGAAAGGAGAGAGAATGCGTTTTTGCACAGAGAGAGAATCAGCC
                      ____________________________________________________________
consensus             ATGGGGTCAACGAAAGTGAAAGGAGAGAGAATGCGTTTTTGCACAGAGAGAGAATCAGCC