Contig 007439:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008N02Sequence584007439 (5)ref|XP_006363689.1|1e-29PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]721008231 (7)ref|XP_006363689.1|4e-94PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]
JMFF025E23Sequence584007439 (5)ref|XP_006363689.1|3e-30PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]804008231 (7)ref|XP_006363689.1|5e-107PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]
JMFF038D03Sequence543007439 (5)ref|XP_004249606.1|3e-25PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum lycopersicum]744008231 (7)gb|KHG20895.1|4e-86UDP-glucuronic acid decarboxylase 1 [Gossypium arboreum]
JMSF040F14Sequence605007439 (5)ref|XP_006363689.1|2e-40PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]871008231 (7)ref|XP_002534053.1|2e-122dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] gb|EEF28331.1| dtdp-gl
JMSF042C18Sequence807007439 (5)emb|CBI32663.3|3e-89unnamed protein product [Vitis vinifera]819008231 (7)ref|XP_006363689.1|2e-123PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF042C18+                            TGACAGGATTATACTTGTAATGANCCGGGGAAGCAGGCCAAGC
                      ____________________________________________________________
consensus                              TGACAGGATTATACTTGTAATGANCCGGGGAAGCAGGCCAAGC
 
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JMSF042C18+           CAAGTGGTAAATCTGATCGACCTCCAGCAAAATGGGCTCCACAACATCATGTCGGATGAG
                      ____________________________________________________________
consensus             CAAGTGGTAAATCTGATCGACCTCCAGCAAAATGGGCTCCACAACATCATGTCGGATGAG
 
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JMSF042C18+           CTCAAACCTCGGATTCCCGAAATGGTGCATCACGTTCTCCTTCCTGCCGGTGAAGAAATT
                      ____________________________________________________________
consensus             CTCAAACCTCGGATTCCCGAAATGGTGCATCACGTTCTCCTTCCTGCCGGTGAAGAAATT
 
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JMSF040F14+                                     TCTTCATCAGCTNATCGACCAAATGACTGCCGAC
JMSF042C18+           ATCAATGACGATCACATCGTCGCCTCTCTTCATCAGCTTATCGACCAAATGACTGCCGAC
                      ____________________________________________________________
consensus             ATCAATGACGATCACATCGTCGCCTCTCTTCATCAGCTTATCGACCAAATGACTGCCGAC
 
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JMSF040F14+           GAACCCGGCCCCGCCGGTGATCACAATCCGCATCCGCTTCCTCGCAATCCCGACGGGCAC
JMSF042C18+           GAACCCGGCCCCGCCGGTGATCACAATCCGCATCCGCTTCCTCGCAATCCCGACGGGCAC
JMFF025E23+                           GTGATCACAATCCGCATCCGCTTCCTCGCAATCCCGACGGGCAC
JMFF008N02+                           GTGATCACAATCCGCATCCGCTTCCTCGCAATCCCGACGGGCAC
JMFF038D03+                                                                    CAC
                      ____________________________________________________________
consensus             GAACCCGGCCCCGCCGGTGATCACAATCCGCATCCGCTTCCTCGCAATCCCGACGGGCAC
 
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JMSF040F14+           TCTCCCGATCCCGGCCGCGCCATATCCGCTACTCCTGGCAGGGGTATACTCGGGGAGCGC
JMSF042C18+           TCTCCCGATCCCGGCCGCGCCATATCCGCTACTCCTGGCAGGGGTATACTCGGGGAGCGC
JMFF025E23+           TCTCCCGATCCCGGCCGCGCCATATCCGCTACTCCTGGCAGGGGTATACTCGGGGAGCGC
JMFF008N02+           TCTCCCGATCCCGGCCGCGCCATATCCGCTACTCCTGGCAGGGGTATACTCGGGGAGCGC
JMFF038D03+           TCTCCCGATCCCGGCCGCGCCATATCCGCTACTCCTGGCAGGGGTATACTCGGGGAGCGC
                      ____________________________________________________________
consensus             TCTCCCGATCCCGGCCGCGCCATATCCGCTACTCCTGGCAGGGGTATACTCGGGGAGCGC
 
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JMSF040F14+           CTCCCTGTTGGAGAGGTGGAAAGAGTGGGATCTGGGAATCGGGGAAGAAGAGCTGAGATG
JMSF042C18+           CTCCCTGTTGGAGAGGTGGAAAGAGTGGGATCTGGGAATCGGGGAAGAAGAGCTGAGATG
JMFF025E23+           CTCCCTGTTGGAGAGGTGGAAAGAGTGGGATCTGGGAATCGGGGAAGAAGAGCTGAGATG
JMFF008N02+           CTCCCTGTTGGAGAGGTGGAAAGAGTGGGATCTGGGAATCGGGGAAGAAGAGCTGAGATG
JMFF038D03+           CTCCCTGTTGGAGAGGTGGAAAGAGTGGGATCTGGGAATCGGGGAAGAAGAGCTGAGATG
                      ____________________________________________________________
consensus             CTCCCTGTTGGAGAGGTGGAAAGAGTGGGATCTGGGAATCGGGGAAGAAGAGCTGAGATG
 
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JMSF040F14+           TGAAAGGCTGGGCTGGATGATGAAGAAAGTGGAGCCAATGAGAATACCGACGAGAATGAA
JMSF042C18+           TGAAAGGCTGGGCTGGATGATGAAGAAAGTGGAGCCAATGAGAATACCGACGAGAATGAA
JMFF025E23+           TGAAAGGCTGGGCTGGATGATGAAGAAAGTGGAGCCAATGAGAATACCGACGAGAATGAA
JMFF008N02+           TGAAAGGCTGGGCTGGATGATGAAGAAAGTGGAGCCAATGAGAATACCGACGAGAATGAA
JMFF038D03+           TGAAAGGCTGGGCTGGATGATGAAGAAAGTGGAGCCAATGAGAATACCGACGAGAATGAA
                      ____________________________________________________________
consensus             TGAAAGGCTGGGCTGGATGATGAAGAAAGTGGAGCCAATGAGAATACCGACGAGAATGAA
 
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JMSF040F14+           CAAAAGCCTCTGCTCTCTGAGGAGATAGTTGATGGATCTGGGTAGAGATCTGGGGTGTTT
JMSF042C18+           CAAAAGCCTCTGCTCTCTGAGGAGATAGTTGATGGATCTGGGTAGAGATCTGGGGTGTTT
JMFF025E23+           CAAAAGCCTCTGCTCTCTGAGGAGATAGTTGATGGATCTGGGTAGAGATCTGGGGTGTTT
JMFF008N02+           CAAAAGCCTCTGCTCTCTGAGGAGATAGTTGATGGATCTGGGTAGAGATCTGGGGTGTTT
JMFF038D03+           CAAAAGCCTCTGCTCTCTGAGGAGATAGTTGATGGATCTGGGTAGAGATCTGGGGTGTTT
                      ____________________________________________________________
consensus             CAAAAGCCTCTGCTCTCTGAGGAGATAGTTGATGGATCTGGGTAGAGATCTGGGGTGTTT
 
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JMSF040F14+           CAGGGTTTTGGGGGAGTAAGGCGGGGTATTCTGGGCCGTCTCTTCATCTCTTCTGTAATT
JMSF042C18+           CAGGGTTTTGGGGGAGTAAGGCGGGGTATTCTGGGCCGTCTCTTCATCTCTTCTGTAATT
JMFF025E23+           CAGGGTTTTGGGGGAGTAAGGCGGGGTATTCTGGGCCGTCTCTTCATCTCTTCTGTAATT
JMFF008N02+           CAGGGTTTTGGGGGAGTAAGGCGGGGTATTCTGGGCCGTCTCTTCATCTCTTCTGTAATT
JMFF038D03+           CAGGGTTTTGGGGGAGTAAGGCGGGGTATTCTGGGCCGTCTCTTCATCTCTTCTGTAATT
                      ____________________________________________________________
consensus             CAGGGTTTTGGGGGAGTAAGGCGGGGTATTCTGGGCCGTCTCTTCATCTCTTCTGTAATT
 
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JMSF040F14+           CACGCTCGCCTGTTTGTGCAATTTCATGGCGAATTCCTCCTCTCTGTCTGTCTTGAATTA
JMSF042C18+           CACGCTCGCCTGTTTGTGCAATTTCATGGCGAATTCCTCCTCTCTGTCTGTCTTGAATTA
JMFF025E23+           CACGCTCGCCTGTTTGTGCAATTTCATGGCGAATTCCTCCTCTCTGTCTGTCTCGAATTA
JMFF008N02+           CACGCTCGCCTGTTTGTGCAATTTCATGGCGAATTCCTCCTCTCTGTCTGTCTTGAATTA
JMFF038D03+           CACGCTCGCCTGTTTGTGCAATTTCATGGCGAATTCCTCCTCTCTGTCTGTCTTGAATTA
                      ____________________________________________________________
consensus             CACGCTCGCCTGTTTGTGCAATTTCATGGCGAATTCCTCCTCTCTGTCTGTCTTGAATTA
 
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JMSF040F14+           TCGAGTTTTCGAATCCTTTTTTCAGGTGAAAAATGGAGGCTTGAATTGCTCTGCAACTGA
JMSF042C18+           TCGAGTTTTCGAATCCTTTTTTCAGGTGAAAAATGGAGGCTTGAATTGCTCTGCAACTGA
JMFF025E23+           TCGAGTTTTCTAATCCTTTTTTCAGGTGAAAAATGGAGGCTTGAATTGCTCTGCAACTGA
JMFF008N02+           TCGAGTTTTCGAATCCTTTTTTCAGGTGAAAAATGGAGGCTTGAATTGCTCTGCAACTGA
JMFF038D03+           TCGAGTTTTCGAATCCTTTTTTCAGGTGAAAAATGGAGGCTTGAATTGCTCTGCAACTGA
                      ____________________________________________________________
consensus             TCGAGTTTTCGAATCCTTTTTTCAGGTGAAAAATGGAGGCTTGAATTGCTCTGCAACTGA
 
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JMSF040F14+           AATGCAAATCGGCTGTGTATATATTGGAAGACAAAGAAGTGGTAGGTGCTTGAAGGCGCT
JMSF042C18+           AATGCAAATCGGCTGTGTATATATTGGAAGACAAAGAAGTGGTAGGTGCTTGAAGGCGCT
JMFF025E23+           AATGCAAATCGGCTGTGTATATATTGGAAGACAAAGAAGTGGTAGGTGCTTGAAGGCGCT
JMFF008N02+           AATGCAAATCGGCTGTGTATATATTGGAAGACAAAGAAGTGGTAGGTGCTTGAAGGCGCT
JMFF038D03+           AATGCAAATCGGCTGTGTATATATTGGAAGACAAAGAAGTGGTAGGTGCTTGAAGGCGCT
                      ____________________________________________________________
consensus             AATGCAAATCGGCTGTGTATATATTGGAAGACAAAGAAGTGGTAGGTGCTTGAAGGCGCT
 
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JMSF040F14+           ACCTGAACTTCTCTTCTCTTTCAACAGTTT                              
JMSF042C18+           ACCTGAACTTCTCTTCTCTTTCAACAGTTTGAAGAGAGAGAGT                 
JMFF025E23+           ACCTGAACTTCTCTTCTCTTTCAACAGTTTGAAGAGAGAGAGTGAATGGCAATGG     
JMFF008N02+           ACCTGAACTTCTCTTCTCTTTCAACAGTTTGAAGAGAGAGAGTGAATGGCAATGG     
JMFF038D03+           ACCTGAACTTCTCTTCTCTTTCAACAGTTTGAAGAGAGAGAGTGAATGGCAATGGCCAAT
                      ____________________________________________________________
consensus             ACCTGAACTTCTCTTCTCTTTCAACAGTTTGAAGAGAGAGAGTGAATGGCAATGGCCAAT