Contig 007414:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031I04Sequence553007414 (4)ref|XP_008337894.1|6e-53PREDICTED: vacuolar protein sorting-associated protein 4 [Malus domestica]798012342 (5)ref|XP_009597831.1|1e-103PREDICTED: vacuolar protein sorting-associated protein 4-like isoform X1 [Nicot
JMFF036O19Sequence527007414 (4)ref|XP_008337894.1|6e-56PREDICTED: vacuolar protein sorting-associated protein 4 [Malus domestica]668012342 (5)ref|XP_009597831.1|3e-98PREDICTED: vacuolar protein sorting-associated protein 4-like isoform X1 [Nicot
JMFF039O23Sequence497007414 (4)ref|XP_008337894.1|1e-51PREDICTED: vacuolar protein sorting-associated protein 4 [Malus domestica]764012342 (5)ref|XP_009597831.1|5e-129PREDICTED: vacuolar protein sorting-associated protein 4-like isoform X1 [Nicot
JMSF030M19Sequence649007414 (4)gb|AIN75626.1|6e-82K+ transport growth defect-like protein [Hevea brasiliensis]683012342 (5)ref|XP_009597831.1|2e-101PREDICTED: vacuolar protein sorting-associated protein 4-like isoform X1 [Nicot

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF030M19+ CTCTAGCCCGGCAAC
                      ____________________________________________________________
consensus CTCTAGCCCGGCAAC
 
. : . : . : . : . : . :
JMSF030M19+ ATCACTCCACTTGACATTAGGCTTTTCTCTAACGATCGCCGAGTTGAGCCCAGCCCGGAG
                      ____________________________________________________________
consensus ATCACTCCACTTGACATTAGGCTTTTCTCTAACGATCGCCGAGTTGAGCCCAGCCCGGAG
 
. : . : . : . : . : . :
JMFF039O23+ CTGGA
JMFF036O19+ CCTTAGGCTTGGTCTTAGACCTGGA
JMSF030M19+ CTTGGACTGCTCAGGATCCTCCCCGTCCTCCCCATCCTTAGGCTTGGTCTTAGACCTGGA
JMFF031I04+ TCTTAGACCTGGA
                      ____________________________________________________________
consensus CTTGGACTGCTCAGGATCCTCCCCGTCCTCCCCATCCTTAGGCTTGGTCTTAGACCTGGA
 
. : . : . : . : . : . :
JMFF039O23+ AGCCACGGCCGCATCCCCGTTGGAAGCGGGGCCGGGGCCGGTGCCGCCCTCATCAAGCAC
JMFF036O19+ AGCCACGGCCGCATCCCCGTTGGAAGCGGGGCCGGGGCCGGTGCCGCCCTCATCAAGCAC
JMSF030M19+ AGCCACGGCCGCATCCCCGTTGGAAGCGGGGCCGGGGCCGGTGCCGCCCTCATCAAGCAC
JMFF031I04+ AGCCACGGCCGCATCCCCGTTGGAAGCGGGGCCGGGGCCGGTGCCGCCCTCATCAAGCAC
                      ____________________________________________________________
consensus AGCCACGGCCGCATCCCCGTTGGAAGCGGGGCCGGGGCCGGTGCCGCCCTCATCAAGCAC
 
. : . : . : . : . : . :
JMFF039O23+ AGCTCGGATCTCCTCCGCACGGCGCAAGTACTCCGTGAACTTGTGGGTGATGGCCTCCTT
JMFF036O19+ AGCTCGGATCTCCTCCGCACGGCGCAAGTACTCCGTGAACTTGTGGGTGATGGCCTCCTT
JMSF030M19+ AGCTCGGATCTCCTCCGCACGGCGCAAGTACTCCGTGAACTTGTGGGTGATGGCCTCCTT
JMFF031I04+ AGCTCGGATCTCCTCCGCACGGCGCAAGTACTCCGTGAACTTGTGGGTGATGGCCTCCTT
                      ____________________________________________________________
consensus AGCTCGGATCTCCTCCGCACGGCGCAAGTACTCCGTGAACTTGTGGGTGATGGCCTCCTT
 
. : . : . : . : . : . :
JMFF039O23+ GATCTTGGGGTTCTTCTCGTACTTGAGGTGAGTCTTGAAGTATTCCAAGGCGTTCATGTA
JMFF036O19+ GATCTTGGGGTTCTTCTCGTACTTGAGGTGAGTCTTGAAGTATTCCAAGGCGTTCATGTA
JMSF030M19+ GATCTTGGGGTTCTTCTCGTACTTGAGGTGAGTCTTGAAGTATTCCAAGGCGTTCATGTA
JMFF031I04+ GATCTTGGGGTTCTTCTCGTACTTGAGGTGAGTCTTGAAGTATTCCAAGGCGTTCATGTA
                      ____________________________________________________________
consensus GATCTTGGGGTTCTTCTCGTACTTGAGGTGAGTCTTGAAGTATTCCAAGGCGTTCATGTA
 
. : . : . : . : . : . :
JMFF039O23+ CAGCGGGAACGCCTTGGCGTAGTTCCCCGCATTGTCCTCCTGCACCGCTTGCCGCACATA
JMFF036O19+ CAGCGGGAACGCCTTGGCGTAGTTCCCCGCATTGTCCTCCTGCACCGCTTGCCGCACATA
JMSF030M19+ CAGCGGGAACGCCTTGGCGTAGTTCCCCGCATTGTCCTCCTGCACCGCTTGCCGCACATA
JMFF031I04+ CAGCGGGAACGCCTTGGCGTAGTTCCCCGCATTGTCCTCCTGCACCGCTTGCCGCACATA
                      ____________________________________________________________
consensus CAGCGGGAACGCCTTGGCGTAGTTCCCCGCATTGTCCTCCTGCACCGCTTGCCGCACATA
 
. : . : . : . : . : . :
JMFF039O23+ CTCGATCGCCTGCTCTTTGAAATTGCTATACATCCTCCTCGATCATGCGTGTGTAAGTAA
JMFF036O19+ CTCGATCGCCTGCTCTTTGAAATTGCTATACATCCTCCTCGATCATGCGTGTGTAAGTAA
JMSF030M19+ CTCGATCGCCTGCTCTTTGAAATTGCTATACATCCTCCTCGATCATGCGTGTGTAAGTAA
JMFF031I04+ CTCGATCGCCTGCTCTTTGAAATTGCTATACATCCTCCTCGATCATGCGTGTGTAAGTAA
                      ____________________________________________________________
consensus CTCGATCGCCTGCTCTTTGAAATTGCTATACATCCTCCTCGATCATGCGTGTGTAAGTAA
 
. : . : . : . : . : . :
JMFF039O23+ ACACACAGAGACGAAGTGAGGAACCCTAGAAACTGGTGGATTGTTTGTTTAATCGATGGA
JMFF036O19+ ACACACAGAGACGAAGTGAGGAACCCTAGAAACTGGTGGATTGTTTGTTTAATCGATGGA
JMSF030M19+ ACACACAGAGACGAAGTGAGGAACCCTAGAAACTGGTGGATTGTTTGTTTAATCGATGGA
JMFF031I04+ ACACACAGAGACGAAGTGAGGAACCCTAGAAACTGGTGGATTGTTTGTTTAATCGATGGA
                      ____________________________________________________________
consensus ACACACAGAGACGAAGTGAGGAACCCTAGAAACTGGTGGATTGTTTGTTTAATCGATGGA
 
. : . : . : . : . : . :
JMFF039O23+ TATCAGTAACAAATTTGAAATTCTTGGAACCCTAGAAATGAGGGGCTTTAGATTTAGGAA
JMFF036O19+ TATCAGTAACAAATTTGAAATTCTTGGAACCCTAGAAATGAGGGGCTTTAGATTTAGGAA
JMSF030M19+ TATCAGTAACAAATTTGAAATTCTTGGAACCCTAGAAATGACGGGCTTTAGATTTAGGAA
JMFF031I04+ TATCAGTAACAAATTTGAAATTCTTGGAACCCTAGAAATGAGGGGCTTTAGATTTAGGAA
                      ____________________________________________________________
consensus TATCAGTAACAAATTTGAAATTCTTGGAACCCTAGAAATGAGGGGCTTTAGATTTAGGAA
 
. : . : . : . : . : . :
JMFF039O23+ ATGAAATAATTTCGGATAACTAAAAATAATAATCAGAGTTTGAATTTGAATCATCAAAGT
JMFF036O19+ ATGAAATAATTTCGGATAACTAAAAATAATAATCAGAGTTTGAATTTGAATCATCAAAGT
JMSF030M19+ ATGAAATAATTTCGGATAACTAAAAATAATAATCAGAGTTTGAATTTGAATCATCAAAGT
JMFF031I04+ ATGAAATAATTTCGGATAACTAAAAATAATAATCAGAGTTTGAATTTGAATCATCAAAGT
                      ____________________________________________________________
consensus ATGAAATAATTTCGGATAACTAAAAATAATAATCAGAGTTTGAATTTGAATCATCAAAGT
 
. : . : . : . : . : . :
JMFF039O23+ ATGCTGAT
JMFF036O19+ ATGCTGAT
JMSF030M19+ ATGCTGATTGCTGATTCCATAGTTGTTAAGAAT
JMFF031I04+ ATGCTGATTGCTGATTCCATAGTTGTTAAGAATGGTCTGCTCTAAACCAAGGTGCCCCCT
                      ____________________________________________________________
consensus ATGCTGATTGCTGATTCCATAGTTGTTAAGAATGGTCTGCTCTAAACCAAGGTGCCCCCT