Contig 007352:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018H10Sequence581007352 (2)emb|CDP10959.1|1e-37unnamed protein product [Coffea canephora]803006837 (2)ref|XP_009799513.1|1e-86PREDICTED: putative ABC transporter C family member 15 isoform X2 [Nicotiana sy
JMSF008C23Sequence392007352 (2)emb|CDP10959.1|7e-16unnamed protein product [Coffea canephora]742006837 (2)ref|XP_009799513.1|2e-83PREDICTED: putative ABC transporter C family member 15 isoform X2 [Nicotiana sy

Alignment

This contig is upended


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JMFF018H10+                              TTCCTCATCATAATTGCCATCTCCATATGGTATCAGGTAAA
                      ____________________________________________________________
consensus                                TTCCTCATCATAATTGCCATCTCCATATGGTATCAGGTAAA
 
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JMFF018H10+           AACAATCTCCTCCAAGATTACAAGAACCACTGCTAGAGAACTTGCTAGGATGGTTGGCAC
                      ____________________________________________________________
consensus             AACAATCTCCTCCAAGATTACAAGAACCACTGCTAGAGAACTTGCTAGGATGGTTGGCAC
 
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JMSF008C23+                                                                  ATTCG
JMFF018H10+           TCAGAAAGCTCCAGTTCAACATCACTTCTCAGAATCAATCAGTGGGGTAGTAACAATTCG
                      ____________________________________________________________
consensus             TCAGAAAGCTCCAGTTCAACATCACTTCTCAGAATCAATCAGTGGGGTAGTAACAATTCG
 
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JMSF008C23+           CTGCTTCAATCAGGAAGACAGATTGTTGAAGAAGAATCTGAGCCTCATTGATTGCTACTC
JMFF018H10+           CTGCTTCAATCAGGAAGACAGATTGTTGAAGAAGAATCTGAGCCTCATTGATTGCTACTC
                      ____________________________________________________________
consensus             CTGCTTCAATCAGGAAGACAGATTGTTGAAGAAGAATCTGAGCCTCATTGATTGCTACTC
 
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JMSF008C23+           TCGTGTTGCATTTTACAACTCTGCCACAATGGAATGGCTCAGTGTCCGAATAAACTTTCT
JMFF018H10+           TCGTGTTGCATTTTACAACTCTGCCACAATGGAATGGCTCAGTGTCCGAATAAACTTTCT
                      ____________________________________________________________
consensus             TCGTGTTGCATTTTACAACTCTGCCACAATGGAATGGCTCAGTGTCCGAATAAACTTTCT
 
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JMSF008C23+           CTTCAACCTTGGTTTTTTATTTCTTCTTATCATACTGGTGAACCTTCCCAGATCAGCCAT
JMFF018H10+           CTTCAACCTTGGTTTTTTATTTCTTCTTATCATACTGGTGAACCTTCCCAGATCAGCCAT
                      ____________________________________________________________
consensus             CTTCAACCTTGGTTTTTTATTTCTTCTTATCATACTGGTGAACCTTCCCAGATCAGCCAT
 
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JMSF008C23+           TGATCCCAGTAAGTGCATCCTGTTCTCTTCCTTTTTCTGTAGCAATTTCTCTTTGTGAGA
JMFF018H10+           TGATCCCAGTAAGTGCATCCTGTTCTCTTCCTTTTTCTGTAGCAATTTCTCTTTGTGAGA
                      ____________________________________________________________
consensus             TGATCCCAGTAAGTGCATCCTGTTCTCTTCCTTTTTCTGTAGCAATTTCTCTTTGTGAGA
 
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JMSF008C23+           ATTGAAAGCAGTGATGGTGTAATCGATGCCGACGAAGAGGATGATTTTAAGGTCGAATCC
JMFF018H10+           ATTGAAAGCAGTGATGGTGTAATCGATGCCGACGAAGAGGATGATTTTAAGGTCGAATCC
                      ____________________________________________________________
consensus             ATTGAAAGCAGTGATGGTGTAATCGATGCCGACGAAGAGGATGATTTTAAGGTCGAATCC
 
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JMSF008C23+           ATACCCGTTTGGAGTAGGAATTGCATCCCTCTTGTGCTTCAACAATGGCTTTCGTTGTTT
JMFF018H10+           ATACCCGTTTGGAGTAGGAATTGCATCCCTCTTGTGCTTCAACAATGGCTTTCGTTGTTT
                      ____________________________________________________________
consensus             ATACCCGTTTGGAGTAGGAATTGCATCCCTCTTGTGCTTCAACAATGGCTTTCGTTGTTT
 
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JMSF008C23+           CTCTCTTGATGGGCAGTGAGATAGA                                   
JMFF018H10+           CTCTCTTGATGGGCAGTGAGATAGATATGGAAGCCAAATTCGATTTTGCTGCATTTTCAT
                      ____________________________________________________________
consensus             CTCTCTTGATGGGCAGTGAGATAGATATGGAAGCCAAATTCGATTTTGCTGCATTTTCAT