Contig 007305:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009C01Sequence612007305 (4)ref|XP_011096601.1|1e-35PREDICTED: F-box protein At4g18380-like [Sesamum indicum]688008163 (4)gb|EYU33385.1|8e-16hypothetical protein MIMGU_mgv1a008110mg [Erythranthe guttata]
JMFF010D17Sequence271007305 (4)ref|XP_011085237.1|8e-06PREDICTED: F-box protein At4g18380-like [Sesamum indicum]691008163 (4)ref|XP_006355407.1|2e-42PREDICTED: F-box protein At5g46170-like [Solanum tuberosum]
JMFF022H09Sequence452007305 (4)gb|EYU33385.1|3e-22hypothetical protein MIMGU_mgv1a008110mg [Erythranthe guttata]699008163 (4)ref|XP_006355407.1|2e-43PREDICTED: F-box protein At5g46170-like [Solanum tuberosum]
JMSF051B08Sequence693007305 (4)ref|XP_011096601.1|5e-41PREDICTED: F-box protein At4g18380-like [Sesamum indicum]797008163 (4)ref|XP_006355407.1|4e-59PREDICTED: F-box protein At5g46170-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF051B08+ GCTCGGCA
                      ____________________________________________________________
consensus GCTCGGCA
 
. : . : . : . : . : . :
JMSF051B08+ GCTCGATGCGGAGGAGCTTGATTTCGTTAAAATCTTCAAGACCTGAGTGGGGGAGTGGTG
                      ____________________________________________________________
consensus GCTCGATGCGGAGGAGCTTGATTTCGTTAAAATCTTCAAGACCTGAGTGGGGGAGTGGTG
 
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JMSF051B08+ GGTCACGGAGCTCTGGTCAAACTCGCCGTCTTCGAGCGCCGACGACGCGGCGACGCGCCT
JMFF009C01+ GGCGACGCGCCT
                      ____________________________________________________________
consensus GGTCACGGAGCTCTGGTCAAACTCGCCGTCTTCGAGCGCCGACGACGCGGCGACGCGCCT
 
. : . : . : . : . : . :
JMSF051B08+ CGGGGAGGCGGAGATGAATTGGGAGAGAGACTGGAAAGGCTTGAGCAGGCCCGTGAACAC
JMFF009C01+ CGGGGAGGCGGAGATGAATTGGGAGAGAGACTGGAAAGGCTTGAGCAGGCCCGTGAACAC
                      ____________________________________________________________
consensus CGGGGAGGCGGAGATGAATTGGGAGAGAGACTGGAAAGGCTTGAGCAGGCCCGTGAACAC
 
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JMSF051B08+ GAGGCGGAGGATGGAGGAGATGGGGTGCCGAGACTTGTCAGACGCGGCCGCCGCCGCCGC
JMFF009C01+ GAGGCGGAGGATGGAGGAGATGGGGTGCCGAGACTTGTCAGACGCGGCCGCCGCCGCCGC
                      ____________________________________________________________
consensus GAGGCGGAGGATGGAGGAGATGGGGTGCCGAGACTTGTCAGACGCGGCCGCCGCCGCCGC
 
. : . : . : . : . : . :
JMSF051B08+ GGCCGACGACGACGGTGAAGAACCGTCTTCGTCGGAGATAACGCAGTCAACCCGAACGAC
JMFF022H09+ TCGTCGGAGATAACGCAGTCAACCCGAACGAC
JMFF009C01+ GGCCGACGACGACGGTGAAGAACCGTCTTCGTCGGAGATAACGCAGTCAACCCGAACGAC
                      ____________________________________________________________
consensus GGCCGACGACGACGGTGAAGAACCGTCTTCGTCGGAGATAACGCAGTCAACCCGAACGAC
 
. : . : . : . : . : . :
JMSF051B08+ GACGTTGTCAACCTGGGGCACGAGCGAATGGAAACGCTTGGAAACGACGCAGCATCGGCC
JMFF022H09+ GACGTTGTCAACCTGGGGCACGAGCGAATGGAAACGCTTGGAAACGACGCAGCATCGGCC
JMFF009C01+ GACGTTGTCAACCTGGGGCACGAGCGAATGGAAACGCTTGGAAACGACGCAGCATCGGCC
                      ____________________________________________________________
consensus GACGTTGTCAACCTGGGGCACGAGCGAATGGAAACGCTTGGAAACGACGCAGCATCGGCC
 
. : . : . : . : . : . :
JMSF051B08+ GAGAGCTTTGACATCGCCGATCATATTGAAGACGAGCAGGATGAGAGAATCCGGCAGCCG
JMFF022H09+ GAGAGCTTTGACATCGCCGATCATATTGAAGACGAGCAGGATGAGAGAATCCGGCAGCCG
JMFF010D17+ CGAGCAGGATGAGAGAATCCGGCAGCCG
JMFF009C01+ GAGAGCTTTGACATCGCCGATCATATTGAAGACGAGCAGGATGAGAGAATCCGGCAGCCG
                      ____________________________________________________________
consensus GAGAGCTTTGACATCGCCGATCATATTGAAGACGAGCAGGATGAGAGAATCCGGCAGCCG
 
. : . : . : . : . : . :
JMSF051B08+ GTCGAAGTGGTCCACCGGCTCCGGGTACACTCTGCAACTCAGATCTGGCCTTACAGAACC
JMFF022H09+ GTCGAAGTGGTCCACCGGCTCCGGGTACACTCTGCAACTCAGATCTGGCCTTACAGAACC
JMFF010D17+ GTNGAAGTGGTCCACCGGCTCCGGGTACACTCTGCAACTCAGATCTGGCCTTACAGAACC
JMFF009C01+ GTCGAAGTGGTCCACCGGCTCCGGGTACACTCTGCAACTCAGATCTGGCCTTACAGAACC
                      ____________________________________________________________
consensus GTCGAAGTGGTCCACCGGCTCCGGGTACACTCTGCAACTCAGATCTGGCCTTACAGAACC
 
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JMSF051B08+ CATATCCCAACAATTTCAAGCTATATATGTATGTATCTCCACAAAGACACCCAGAAAACG
JMFF022H09+ CATATCCCAACAATTTCAAGCTATATATGTATGTATCTCCACAAAGACACCCAGAAAACG
JMFF010D17+ CATATCCCAACAATTTCAAGCTATATATGTATGTATCTCCACAAAGACACCCAGAAAACG
JMFF009C01+ CATATCCCAACAATTTCAAGCTATATATGTATGTATCTCCACAAAGACACCCAGAAAACG
                      ____________________________________________________________
consensus CATATCCCAACAATTTCAAGCTATATATGTATGTATCTCCACAAAGACACCCAGAAAACG
 
. : . : . : . : . : . :
JMSF051B08+ ATATATAACTATGAATAAACGCAAGAACGGAGAATTGAGAGAATCCGGTAGGATTGGGAT
JMFF022H09+ ATATATAACTATGAATAAACGCAAGAACGGAGAATTGAGAGAATCCGGTAGGATTGGGAT
JMFF010D17+ ATATATAACTATGAATAAACGCAAGAACGGAGAATTGAGAGAATCCGGTAGGATTGGGAT
JMFF009C01+ ATATATAACTATGAATAAACGCAAGAACGGAGAATTGAGAGAATCCGGTAGGATTGGGAT
                      ____________________________________________________________
consensus ATATATAACTATGAATAAACGCAAGAACGGAGAATTGAGAGAATCCGGTAGGATTGGGAT
 
. : . : . : . : . : . :
JMSF051B08+ TTGAAGAAATGGGCTTTATGGATCTAATAGAGAAGAAATAGACATGGCAGGGGCAGATTT
JMFF022H09+ TTGAAGAAATGGGCTTTATGGATCTAATAGAGAAGAAATAGACATGGCAGGGGCAGATTT
JMFF010D17+ NTGAAGAAATGGGCTTTATGGATNTAATAGAGAAGAAATAGACATGGCAGGGGCAGATTT
JMFF009C01+ TTGAAGAAATGGGCTTTATGGATCTAATAGAGAAGAAATAGACATGGCAGGGGCAGATTT
                      ____________________________________________________________
consensus TTGAAGAAATGGGCTTTATGGATCTAATAGAGAAGAAATAGACATGGCAGGGGCAGATTT
 
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JMSF051B08+ TAGAGAGAGAGAGGTGTGAAGTCT
JMFF022H09+ TAGAGAGAGAGAGGTGTGAAGTCTGGAGATGAAAACACAGTTCTTGCAGTGATAAAGTAT
JMFF009C01+ TAGAGAGAGAGAGGTGTGAAGTCTGGAGATGAAAACACAGTTCTTGCAGTGATAAAGTAT
                      ____________________________________________________________
consensus TAGAGAGAGAGAGGTGTGAAGTCTGGAGATGAAAACACAGTTCTTGCAGTGATAAAGTAT