Contig 007255:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036F21Sequence592013370 (14)ref|XP_006352716.1|3e-36PREDICTED: uncharacterized protein LOC102578662 isoform X1 [Solanum tuberosum]763007255 (5)ref|XP_009592675.1|6e-88PREDICTED: uncharacterized protein LOC104089467 isoform X3 [Nicotiana tomentosi
JMFF046H03Sequence530013370 (14)ref|XP_009770277.1|6e-27PREDICTED: uncharacterized protein LOC104221001 isoform X1 [Nicotiana sylvestri483007255 (5)ref|XP_009780627.1|2e-27PREDICTED: uncharacterized protein LOC104229654 isoform X2 [Nicotiana sylvestri
JMSF008M01Sequence378013370 (14)628007255 (5)ref|XP_009592675.1|7e-55PREDICTED: uncharacterized protein LOC104089467 isoform X3 [Nicotiana tomentosi
JMSF023K20Sequence618013370 (14)ref|XP_006352716.1|2e-36PREDICTED: uncharacterized protein LOC102578662 isoform X1 [Solanum tuberosum]749007255 (5)ref|XP_009592675.1|5e-80PREDICTED: uncharacterized protein LOC104089467 isoform X3 [Nicotiana tomentosi
JMSF052D08Sequence710013370 (14)ref|XP_009592672.1|5e-90PREDICTED: uncharacterized protein LOC104089467 isoform X1 [Nicotiana tomentosi952007255 (5)ref|XP_009592675.1|6e-85PREDICTED: uncharacterized protein LOC104089467 isoform X3 [Nicotiana tomentosi

Alignment

This contig is upended


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rJMSF052D08+                  CAAGGCAGANCCGTCGTGGGGGGAGAGTTGCCTTTTCAGCCCANTAGGTCCA
                      ____________________________________________________________
consensus                     CAAGGCAGANCCGTCGTGGGGGGAGAGTTGCCTTTTCAGCCCANTAGGTCCA
 
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rJMFF036F21+              TAATAGACAAATCTCCTCCAATAGGATCAGTTGCCCGTACTCTATCATGGGATGAT
rJMSF023K20+                                     GGATCAGTTGCCCGTACTCTATCATGGGATGAT
rJMSF052D08+          ATTTTAATAGACAAATCTCCTCCAATAGGATCAGTTGCCCGTACTCTATCATGGGATGAT
                      ____________________________________________________________
consensus             ATTTTAATAGACAAATCTCCTCCAATAGGATCAGTTGCCCGTACTCTATCATGGGATGAT
 
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rJMSF008M01+                                                  CACCAGTATCAATGCAAAGG
rJMFF036F21+          TCTTGTGTAGATACAGCCACGTCATCATATTCACTTAACCCACCAGTATCAATGCAAAGG
rJMSF023K20+          TCTTGTGTAGATACAGCCACGTCATCATATTCACTTAACCCACCAGTATCAATGCAAAGG
rJMSF052D08+          TCTTGTGTAGATACAGCCACGTCATCATATTCACTTAACCCACCAGTATCAATGCAAAGG
                      ____________________________________________________________
consensus             TCTTGTGTAGATACAGCCACGTCATCATATTCACTTAACCCACCAGTATCAATGCAAAGG
 
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rJMSF008M01+          CCCGAGGAAGAAGANCGAGAATGGCTCTTCTTCATTCAGACCTTACTATCCATGGCTGGT
rJMFF036F21+          ACCGAGGAAGAAGAACGAGAATGGCTCTTCTTCATTCAGACCTTACTATCCATGGCTGGT
rJMSF023K20+          ACCGAGGAAGAAGAACGAGAATGGCTCTTCTTCATTCAGACCTTACTATCCATGGCTGGT
rJMSF052D08+          ACCGAGGAGGAAGAACGAGAATGGCTCTTCTTCATTCAGACCTTACTATCCATGGCTGGT
                      ____________________________________________________________
consensus             ACCGAGGAAGAAGAACGAGAATGGCTCTTCTTCATTCAGACCTTACTATCCATGGCTGGT
 
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rJMSF008M01+          CTCGACGAAGTACAATCTGATTCNCTTTCATCGAGATGGCATTCCCCAGATAGCCCACTT
rJMFF036F21+          CTCGACGAAGTACAATCTGATTCACTTTCATCGAGATGGCATTCCCCAGATAGCCCACTT
rJMSF023K20+          CTCGACGAAGTACAATCTGATTCACTTTCATCGAGATGGCATTCCCCAGATAGCCCACTT
rJMSF052D08+          CTCGACGAAGTACAATCTGATTCACTTTCATCGAGATGGCATTCCCCAGATAGCCCACTT
                      ____________________________________________________________
consensus             CTCGACGAAGTACAATCTGATTCACTTTCATCGAGATGGCATTCCCCAGATAGCCCACTT
 
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rJMSF008M01+          GACCCATTANTAAGGGNCAAGTACATCAATTTGAACGAGAAAGAAACAGTGCATGAAGCA
rJMFF036F21+          GACCCATTACTAAGGGACAAGTACATCAATTTGAACGAGAAAGAAACAGTGCATGAAGCA
rJMSF023K20+          GACCCATTACTAAGGGACAAGTACATCAATTTGAACGAGAAAGAAACAGTGCATGAAGCA
rJMSF052D08+          GACCCATTACTAAGGGACAAGTACATCAATTTGAACGAGAAAGAAACAGTGCATGAAGCA
                      ____________________________________________________________
consensus             GACCCATTACTAAGGGACAAGTACATCAATTTGAACGAGAAAGAAACAGTGCATGAAGCA
 
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rJMSF008M01+          AAGCGAAGGCAAAGGAGATCAACTAGAAAGCTNGTGTTTGATTGTGTCAATGCGGCACTG
rJMFF036F21+          AAGCGAAGGCAAAGGAGATCAACTAGAAAGCTCGTGTTTGATTGTGTCAATGCGGCACTG
rJMSF023K20+          AAGCGAAGGCAAAGGAGATCAACTAGAAAGCTCGTGTTTGATTGTGTCAATGCGGCACTG
rJMFF046H03+                                                                   CTG
rJMSF052D08+          AAGCGAAGGCAAAGGAGATCAACTAGAAAGCTCGTGTTTGATTGTGTCAATGCGGCACTG
                      ____________________________________________________________
consensus             AAGCGAAGGCAAAGGAGATCAACTAGAAAGCTCGTGTTTGATTGTGTCAATGCGGCACTG
 
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rJMSF008M01+          ATCGACATAGACACTTGCCACAAAACCATTGCTTTCAGCGGTGCCCATNACACCATCCCA
rJMFF036F21+          ATCGACATAGACACTTGCCACAAAACCATTGCTTTCAGCGGTGCCCATAACACCATCCCA
rJMSF023K20+          ATCGACATAGACACTTGCCACAAAACCATTGCTTTCAGCGGTGCCCATAACACCATCCCA
rJMFF046H03+          ATCGACATAGACACTTGCCACAAAACCATTGCTTTCAGCGGTGCCCATAACACCATCCCA
rJMSF052D08+          ATCGACATAGACACTTGCCACAAAACCATTGCTTTCAGCGGTGCCCATAACACCATCCCA
                      ____________________________________________________________
consensus             ATCGACATAGACACTTGCCACAAAACCATTGCTTTCAGCGGTGCCCATAACACCATCCCA
 
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rJMSF008M01+          GATGGTTCTTCAATTATATCAGCGGACCGGGTTTGGGGAAGGATAAAGGAATGGTTTCCT
rJMFF036F21+          GATGGTTCTTCAATTATATCAGCGGACCGGGTTTGGGGAAGGATAAAGGAATGGTTTCCT
rJMSF023K20+          GATGGTTCTTCAATTATATCAGCGGACCGGGTTTGGGGAAGGATAAAGGAATGGTTTCCT
rJMFF046H03+          GATGGTTCTTCAATTATATCAGCGGACCGGGTTTGGGGAAGGATAAAGGAATGGTTTCCT
rJMSF052D08+          GATGGTTCTTCAATTATATCAGCGGACCGGGTTTGGGGAAGGATAAAGGAATGGTTTCCT
                      ____________________________________________________________
consensus             GATGGTTCTTCAATTATATCAGCGGACCGGGTTTGGGGAAGGATAAAGGAATGGTTTCCT
 
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rJMSF008M01+          AGCGCGGCGGGATGCCTCTCGGACGATGGCGTTGACGACAACAACCTGACCGAGAGGATG
rJMFF036F21+          AGCGCGGCGGGATGCCTCTCGGACGATGGCGTTGACGACAACAACCTGACCGAGAGGATG
rJMSF023K20+          AGCGCGGCGGGATGCCTCTCGGACGATGGCGTTGACGACAACAACCTGACCGAGAGGATG
rJMFF046H03+          AGCGCGGCGGGATGCCTCTCGGACGATGGCGTTGACGACAACAACCTGACCGAGAGGATG
rJMSF052D08+          AGCGCGGCGGGATGCCTCTCGGACGATGGCGTTGACGACAACAACCTGACCGAGAGGATG
                      ____________________________________________________________
consensus             AGCGCGGCGGGATGCCTCTCGGACGATGGCGTTGACGACAACAACCTGACCGAGAGGATG
 
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rJMSF008M01+          GTGAGACAGGAGGCGGTCGGGAAAGGGTGGCACGAATACTTGAGATTAGAAGCGGAAAGT
rJMFF036F21+          GTGAGACAGGAGGCGGTCGGGAAAGGGTGGCACGAATACTTGAGATTAGAAGCGGAAAGT
rJMSF023K20+          GTGAGACAGGAGGCGGTCGGGAAAGGGTGGCACGAATACTTGAGATTAGAAGCGGAAAGT
rJMFF046H03+          GTGAGACAGGAGGCGGTCGGGAAAGGGTGGCACGAATACTTGAGATTAGAAGCGGAAAGT
rJMSF052D08+          GTGAGACAGGAGGCGGTCGGGAAAGGGTGGCACGAATACTTGAGATTAGAAGCGGAAAGT
                      ____________________________________________________________
consensus             GTGAGACAGGAGGCGGTCGGGAAAGGGTGGCACGAATACTTGAGATTAGAAGCGGAAAGT
 
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rJMSF008M01+          ATAGGAAAGGAAATCGAAGGAAAATTGTTGGAAGAGATNGTGCAGGATGCTGTGGTTGGA
rJMFF036F21+          ATAGGAAAGGAAATCGAAGGAAAATTGTTGGAAGAGATTGTGCAGGATGCTGTGGTTGGA
rJMSF023K20+          ATAGGAAAGGAAATCGAAGGAAAATTGTTGGAAGAGATTGTGCAGGATGCTGTGGTTGGA
rJMFF046H03+          ATAGGAAAGGAAATCGAAGGAAAATTGTTGGAAGAGATTGTGCAGGATGCTGTGGTTGGA
rJMSF052D08+          ATAGGAAAGGAAATCGAAGGAAAATTGTTGGAAGAGATTGTGCAGGATGCTGTGGTTGGA
                      ____________________________________________________________
consensus             ATAGGAAAGGAAATCGAAGGAAAATTGTTGGAAGAGATTGTGCAGGATGCTGTGGTTGGA
 
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rJMSF008M01+          TTGNCAGATACAATGTGAATGCACACCTCATCTTCTTCAGGTCTTCTCTAATGTATTATT
rJMFF036F21+          TTGGCAGATACAATGTGAATGCACACCTCATCTTCTTCAGGTCTTCTCTAATGTATTATT
rJMSF023K20+          TTGGCAGATACAATGTGAATGCACACCTCATCTTCTTCAGGTCTTCTCTAATGTATTATT
rJMFF046H03+          TTGGCAGATACAATGTGAATGCACACCTCATCTTCTTCAGGTCTTCTCTAATGTATTATT
rJMSF052D08+          TTGGCAGATACAATGTGAATGCACACCTCATCTTCTTCAGGTCTTCTCTAATGTATTATT
                      ____________________________________________________________
consensus             TTGGCAGATACAATGTGAATGCACACCTCATCTTCTTCAGGTCTTCTCTAATGTATTATT
 
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rJMSF008M01+          T                                                           
rJMFF036F21+          TTCAACTCCATAACTCTTCTTTTGGCTTATTATT                          
rJMSF023K20+          TTCAACTCCATAACTCTTCTTTTGGCTTATTATTATTATTATTGTGTT            
rJMFF046H03+          TTCAACTCCATAACTCTTCTTTTGGCTTATTATTATTATTATTGTGTTTCACCAGAATGA
rJMSF052D08+          TTCAACTCCATAACTCTTCTTTTGGCTTATTATTATTATTATTGTGTTTCACCAGAATGA
                      ____________________________________________________________
consensus             TTCAACTCCATAACTCTTCTTTTGGCTTATTATTATTATTATTGTGTTTCACCAGAATGA
 
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rJMFF046H03+          TGCTTCTGCTCACCTAAGTTTCTCTTTGGTTGCAAA                        
rJMSF052D08+          TGCTTCTGCTCACCTAAGTTTCTCTTTGGTTGCAAATTTTCTCTAGTTTTATTTAGAGTA
                      ____________________________________________________________
consensus             TGCTTCTGCTCACCTAAGTTTCTCTTTGGTTGCAAATTTTCTCTAGTTTTATTTAGAGTA
 
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rJMSF052D08+          ACTTTTGGCCAGAGAGTAGAGACCCCAGACATGAGACCAAGTTGTGCAATGTGTTAATGT
                      ____________________________________________________________
consensus             ACTTTTGGCCAGAGAGTAGAGACCCCAGACATGAGACCAAGTTGTGCAATGTGTTAATGT