Contig 006809:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011F22Sequence614006630 (5)ref|XP_009772814.1|5e-67PREDICTED: histone-lysine N-methyltransferase setd3 [Nicotiana sylvestris]764006809 (5)ref|XP_002509559.1|4e-48conserved hypothetical protein [Ricinus communis] gb|EEF50946.1| conserved hypot
JMSF008F24Sequence390006630 (5)ref|XP_009772814.1|5e-35PREDICTED: histone-lysine N-methyltransferase setd3 [Nicotiana sylvestris]783006809 (5)ref|XP_002509559.1|1e-73conserved hypothetical protein [Ricinus communis] gb|EEF50946.1| conserved hypot
JMSF019G06Sequence581006630 (5)ref|XP_009772814.1|2e-80PREDICTED: histone-lysine N-methyltransferase setd3 [Nicotiana sylvestris]765006809 (5)ref|XP_002509559.1|6e-68conserved hypothetical protein [Ricinus communis] gb|EEF50946.1| conserved hypot
JMSF038A24Sequence647006630 (5)ref|XP_009772814.1|1e-67PREDICTED: histone-lysine N-methyltransferase setd3 [Nicotiana sylvestris]822006809 (5)ref|XP_004303999.1|2e-82PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth
JMSF051L04Sequence647006809 (5)ref|XP_009626256.1|8e-107PREDICTED: histone-lysine N-methyltransferase setd3 isoform X2 [Nicotiana tomen748023657

Alignment

This contig is upended


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JMSF051L04-                                                GTCATTGAGAGAGCTGAAGGGAT
                      ____________________________________________________________
consensus                                                  GTCATTGAGAGAGCTGAAGGGAT
 
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JMSF051L04-           TAAGAGAGAATACAGTGAGCTTGACACAGTATGGTTCATGGCTGGATCACTTTTTCAGCA
                      ____________________________________________________________
consensus             TAAGAGAGAATACAGTGAGCTTGACACAGTATGGTTCATGGCTGGATCACTTTTTCAGCA
 
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JMSF051L04-           ATACCCTTATGATATACCAACAGAAGCATTTCCTTTTGAGATTTTCAAACAAGCTTTTGT
                      ____________________________________________________________
consensus             ATACCCTTATGATATACCAACAGAAGCATTTCCTTTTGAGATTTTCAAACAAGCTTTTGT
 
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JMSF051L04-           TGCAGTTCAATCCTGTGTTGTGCATTTGCAGAAAGTTAGTCTGGCCCGAAGATTTGCTTT
                      ____________________________________________________________
consensus             TGCAGTTCAATCCTGTGTTGTGCATTTGCAGAAAGTTAGTCTGGCCCGAAGATTTGCTTT
 
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JMSF051L04-           AGTTCCTCTAGGACCGCCATTATTATCCTATTGCAGCAACTGCAAAGCAATGCTAGCAGC
                      ____________________________________________________________
consensus             AGTTCCTCTAGGACCGCCATTATTATCCTATTGCAGCAACTGCAAAGCAATGCTAGCAGC
 
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JMSF051L04-           TGTTGACGGTGCTGTGCAACTTGTTGTTGATCGTCCATATAAGACTGGGGAACCAATTGT
                      ____________________________________________________________
consensus             TGTTGACGGTGCTGTGCAACTTGTTGTTGATCGTCCATATAAGACTGGGGAACCAATTGT
 
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JMSF051L04-           TGTTTGGTGTGGGCCACAGCCTAATTCAAAATTGCTCATAAACTATGGTTTTGTTGATGA
rJMSF038A24+                                                          TTTTGTTGATGA
                      ____________________________________________________________
consensus             TGTTTGGTGTGGGCCACAGCCTAATTCAAAATTGCTCATAAACTATGGTTTTGTTGATGA
 
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JMSF051L04-           AGATAATCCTTATGACCGAGTCACTTTAGAGGCAGCATTGAATACAGAGGATCCTCAGTA
rJMSF038A24+          AGATAATCCTTATGACCGAGTCACTTTAGAGGCAGCATTGAATACAGAGGATCCTCAGTA
rJMSF008F24+                                       AGGCAGCANTGAATACAGAGGATCCTCAGTA
                      ____________________________________________________________
consensus             AGATAATCCTTATGACCGAGTCACTTTAGAGGCAGCATTGAATACAGAGGATCCTCAGTA
 
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JMSF051L04-           TCAGGACAAGAGACTGGCTGCTCAAAGGAATGGGAAATCATCTGTACAAGCTTTCCATGT
rJMSF038A24+          TCAGGACAAGAGACTGGCTGCTCAAAGGAATGGGAAATCATCTGTACAAGCTTTCCATGT
rJMSF008F24+          TCAGGACNAGAGACTGGCTGCTCAAAGGAATGGGAAATCATCTGTACAAGCTTTCCATGT
rJMSF019G06+                                                                    GT
rJMFF011F22+                          GCTGCTCAAAGGAATGGGAAATCATCTGTACAAGCTTTCCATGT
                      ____________________________________________________________
consensus             TCAGGACAAGAGACTGGCTGCTCAAAGGAATGGGAAATCATCTGTACAAGCTTTCCATGT
 
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JMSF051L04-           A                                                           
rJMSF038A24+          ATATGTGGGAAGAGAAAAGGAGACTATATCTGAGATGCTCCCTTATTTAAGATTGGGATA
rJMSF008F24+          ATATGTGGGAAGAGAAAAGGAGACTATATCTGAGATGCTCCCTTATTTAAGATTGGGATA
rJMSF019G06+          ATATGTGGGAAGAGAAAAGGAGACTATATCTGAGATGCTCCCTTATTTAAGATTGGGATA
rJMFF011F22+          ATATGTGGGAAGAGAAAAGGAGACTATATCTGAGATGCTCCNTTATTTAAGATTGGGATA
                      ____________________________________________________________
consensus             ATATGTGGGAAGAGAAAAGGAGACTATATCTGAGATGCTCCCTTATTTAAGATTGGGATA
 
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rJMSF038A24+          TGTTTCAGACCCTTCGGAAATGCAATTTGTATTGTCTTCTCAAGGTCCTGTTTGTCCGGT
rJMSF008F24+          TGTTTCAGACCCTTCGGAAATGCAATTTGTATTGTCTTCTCAAGGTCCTGTTTGTCCGGT
rJMSF019G06+          TGTTTCAGACCCTTCGGAAATGCAATTTGTATTGTCTTCTCAAGGTCCTGTTTGTCCGGT
rJMFF011F22+          TGTTTCAGACCCTTCGGAAATGCAATTTGTATTGTCTTCTCAAGGTCCTGTTTGTCCGGT
                      ____________________________________________________________
consensus             TGTTTCAGACCCTTCGGAAATGCAATTTGTATTGTCTTCTCAAGGTCCTGTTTGTCCGGT
 
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rJMSF038A24+          GAGCCCCTGTACAGAACGGGCAGTTTTGGACCAGCTAGCTGAGTATTTCAAGACAAGGCT
rJMSF008F24+          GAGCCCCTGTACAGAACGGGCAGTTTTGGACCAGCTAGCTGAGTATTTCAAGACAAGGCT
rJMSF019G06+          GAGCCCCTGTACAGAACGGGCAGTTTTGGACCAGCTAGCTGAGTATTTCAAGACAAGGCT
rJMFF011F22+          GAGCCCCTGTACAGAACGGGCAGTTTTGGACCAGCTAGCTGAGTATTTCAAGACAAGGCT
                      ____________________________________________________________
consensus             GAGCCCCTGTACAGAACGGGCAGTTTTGGACCAGCTAGCTGAGTATTTCAAGACAAGGCT
 
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rJMSF038A24+          GCTTCGTTATCCCACCACTCTAAGTGAAGATGAGGCTTTGTTGGCAGATAATGACCTGGA
rJMSF008F24+          GCTTCGTTATCCCACCACTCTAAGTGAAGATGAGGCTTTGTTGGCAGATAATGACCTGGA
rJMSF019G06+          GCTTCGTTATCCCACCACTCTAAGTGAAGATGAGGCTTTGTTGGCAGATAATGACCTGGA
rJMFF011F22+          GCTTCGTTATCCCACCACTCTAAGTGAAGATGAGGCTTTGTTGGCAGATAATGACCTGGA
                      ____________________________________________________________
consensus             GCTTCGTTATCCCACCACTCTAAGTGAAGATGAGGCTTTGTTGGCAGATAATGACCTGGA
 
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rJMSF038A24+          TCC-AAAAAAGAGAGTTGCTACACAGCTTGTTAGGTTGGAAAAGAGAATCCTGAACACAT
rJMSF008F24+          TCC-AAAAAAGAGAGTTGCTACACAGCTTGTTAGGTTGGAAAAGAGAATCCTGAACACAT
rJMSF019G06+          TCC-AAAAAAGAGAGTTGCTACACAGCTTGTTAGGTTGGAAAAGAGAATCCTGAACACAT
rJMFF011F22+          TCCAAAAAAAGAGAGTTGCTACACAGCTTGTTAGGTTGGAAAAGAGAATCCTGAACACAT
                      ____________________________________________________________
consensus             TCC-AAAAAAGAGAGTTGCTACACAGCTTGTTAGGTTGGAAAAGAGAATCCTGAACACAT
 
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rJMSF038A24+          GCTTACAGACAACATTGCATCTCATAGACCAGTTACCTGATCTCTCTGTATCTCCTTGCC
rJMSF008F24+          GCTTACAGACAACATTGCATCTCATAGACCAGTTACCTGATCTCTCTGTATCTCCTTGCC
rJMSF019G06+          GCTTACAGACAACATTGCATCTCATAGACCAGTTACCTGATCTCTCTGTATCTCCTTGCC
rJMFF011F22+          GCTTACAGACAACATTGCATCTCATAGACCAGTTACCTGATCTCTCTGTATCTCCTTGCC
                      ____________________________________________________________
consensus             GCTTACAGACAACATTGCATCTCATAGACCAGTTACCTGATCTCTCTGTATCTCCTTGCC
 
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rJMSF038A24+          CTGCTCCTTATGCCCCTATATTAAAATGATAGGGCATTGTTCAGCAAAGAAACAAAAAAA
rJMSF008F24+          CTGCTCCTTATGCCCCTATATTAAAATGATAGGGCATTGTTCAGCAAAGAAACAAAAAAA
rJMSF019G06+          CTGCTCCTTATGCCCCTATATTAAAATGATAGGGCATTGTTCAGCAAAGAAACAAAAAAA
rJMFF011F22+          CTGCTCCTTATGCCCCTATATTAAAATGATAGGGCATTGTTCAGCAAAGAAACGAAAAAA
                      ____________________________________________________________
consensus             CTGCTCCTTATGCCCCTATATTAAAATGATAGGGCATTGTTCAGCAAAGAAACAAAAAAA
 
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rJMSF038A24+          AGTTATTTTTTCAAAGCGAAAATGGGAGGTTGCTGGATGCTGCAAATACTTGGTGTTGGA
rJMSF008F24+          AGTTATTTTTTCAAAGCGAAAATGGGAGGTTGCTGGATGCTGCAAATACTTGGTGTTGGA
rJMSF019G06+          AGTTATTTTTTCAAAGCGAAAATGGGAGGTTGCTGGATGCTGCAAATACTTGGTGTTGGA
rJMFF011F22+          AGTTATTTTTTCAAAGCGAAAATGGGAGGTTGCTGGATGCTGCAAATACTTGGTGTTGGA
                      ____________________________________________________________
consensus             AGTTATTTTTTCAAAGCGAAAATGGGAGGTTGCTGGATGCTGCAAATACTTGGTGTTGGA
 
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rJMSF038A24+          ACTGTTGGGTCCTTGTAATTGAACTACAGTCTCTACTCTCTACCTACCTTATATTTTCTT
rJMSF008F24+          ACTGTTGGGTCCTTGTAATTGAACTACAGTCTCTACTCTCTACCTACCTTATATTTTCTT
rJMSF019G06+          ACTGTTGGGTCCTTGTAATTGAACTACAGTCTCTACTCTCTACCTACCTTATATTTTCTT
rJMFF011F22+          ACTGTTGGGTCCTTGTAATTGAACTACAGTCTCTACTCTCTACCTATCTTATATTTTCTT
                      ____________________________________________________________
consensus             ACTGTTGGGTCCTTGTAATTGAACTACAGTCTCTACTCTCTACCTACCTTATATTTTCTT
 
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rJMSF038A24+          TCCTTGGCTTAGTTGTACATTTTCGCTTGCAATTTCTCACTTCATATCTTTTAGGTTAGA
rJMSF008F24+          TCCTTGGCTTAGTTGTACATTTTCGCTTGCAATTTCTCACTTCATATCTTTTAGGTTAGA
rJMSF019G06+          TCCTTGGCTTAGTTGTACATTTTCGCTTGCAATTTCTCACTTCATATCTTTTAGGTTAGA
rJMFF011F22+          TCCTTGGCTTAGTTGTACATTTTCGCTTGCAATTTCTCACTTCATATCTTTTAGGTTAGA
                      ____________________________________________________________
consensus             TCCTTGGCTTAGTTGTACATTTTCGCTTGCAATTTCTCACTTCATATCTTTTAGGTTAGA
 
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rJMSF038A24+          ATGATATCAGATGCGAATAGCTTTTATCTCACAGTACTTCCCAGCATATCGGCCTTCTGG
rJMSF008F24+          ATGATATCAGATGCGAATAGCTTTTATCTCACAGTACTTCCCAGCATATCGGCCTTCTGG
rJMSF019G06+          ATGATATCAGATGCGAATAGCTTTTATCTCACAGTACTTCCCAGCATATCGGCCTTCTGG
rJMFF011F22+          ATGATATCAGATGCGAATAGCTTTTATCTCACAGTACTTCCCAGCATATCGGCCTTCTGG
                      ____________________________________________________________
consensus             ATGATATCAGATGCGAATAGCTTTTATCTCACAGTACTTCCCAGCATATCGGCCTTCTGG
 
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rJMSF038A24+          TCTTTTATTGTAAATA                                            
rJMSF008F24+          TCTTTTATTGTAAATACTTTTGATGTATCATAC                           
rJMSF019G06+          TCTTTTATTGTAAATACTTTTGATGTATCATACTATGAAACACT                
rJMFF011F22+          TCTTTTATTGTAAATACTTTTGATGTATCATACTATGAAACACTTGTTTCCTGATGCAAT
                      ____________________________________________________________
consensus             TCTTTTATTGTAAATACTTTTGATGTATCATACTATGAAACACTTGTTTCCTGATGCAAT