Contig 006460:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014O21Sequence458006460 (2)ref|XP_009606258.1|1e-42PREDICTED: polygalacturonase QRT2-like [Nicotiana tomentosiformis] ref|XP_009606
JMSF015H04Sequence241006460 (2)ref|XP_009606258.1|2e-13PREDICTED: polygalacturonase QRT2-like [Nicotiana tomentosiformis] ref|XP_009606

Alignment

This contig is upended


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JMFF014O21+                              TTGTCCATCAATTACCCCTCCACCATTAACAATCAGCCCAT
                      ____________________________________________________________
consensus                                TTGTCCATCAATTACCCCTCCACCATTAACAATCAGCCCAT
 
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JMFF014O21+           ATACACCATTGAAACTTAGCCACTGACTTGTGTCGAGCCCATTCCAACCCGGTGGTGAGC
                      ____________________________________________________________
consensus             ATACACCATTGAAACTTAGCCACTGACTTGTGTCGAGCCCATTCCAACCCGGTGGTGAGC
 
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JMFF014O21+           CCGGTGCAACAACCGTACCCGACACTATGAAATGGATATGTTGAGACTTGCAGGGGCCAT
                      ____________________________________________________________
consensus             CCGGTGCAACAACCGTACCCGACACTATGAAATGGATATGTTGAGACTTGCAGGGGCCAT
 
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JMFF014O21+           TAAATTGAACTGGTTTAACCAGAAACGTCGAGCCTGCAGGAATGATCACTTGAGGAGACT
JMSF015H04+                                                                      T
                      ____________________________________________________________
consensus             TAAATTGAACTGGTTTAACCAGAAACGTCGAGCCTGCAGGAATGATCACTTGAGGAGACT
 
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JMFF014O21+           TATGCACAGGAGTCGAAGAACATGCATCCTTCCATGCATTCAGAAAAGCTTGGGAATCAT
JMSF015H04+           TATGCACAGGAGTCGAAGAACATGCATCCTTCCATGCATTCAGAAAAGCTTGGGAATCAT
                      ____________________________________________________________
consensus             TATGCACAGGAGTCGAAGAACATGCATCCTTCCATGCATTCAGAAAAGCTTGGGAATCAT
 
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JMFF014O21+           CTGTCATTCCATCCCCTTTGGCTCCATAGTCTATCACATTAAAGCTTTTGCAAGAAACTC
JMSF015H04+           CTGTCATTCCATCCCCTTTGGCTCCATAGTCTATCACATTAAAGCTTTTGCAAGAAACTC
                      ____________________________________________________________
consensus             CTGTCATTCCATCCCCTTTGGCTCCATAGTCTATCACATTAAAGCTTTTGCAAGAAACTC
 
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JMFF014O21+           TTGATGATGATATCAAGCCAAGAATGAACAAAAAAACAAAAACCTCCATGCTATAGAAGC
JMSF015H04+           TTGATGATGATATCAAGCCAAGAATGAACAAAAAAACAAAAACCTCCATGCTATAGAAGC
                      ____________________________________________________________
consensus             TTGATGATGATATCAAGCCAAGAATGAACAAAAAAACAAAAACCTCCATGCTATAGAAGC
 
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JMFF014O21+           AGCAGTAAAGGGCAAATATAGATGCAGAAAGGATTAATCATGGGTGAATAGTATAAT   
JMSF015H04+           AGCAGTAAAGGGCAAATATAGATGCAGAAAGGATTAATCATGGGTGAATAGTATAATACC
                      ____________________________________________________________
consensus             AGCAGTAAAGGGCAAATATAGATGCAGAAAGGATTAATCATGGGTGAATAGTATAATACC