| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP001B06 | Sequence | 597 | 005859 (7) | ref|XP_009783307.1| | 6e-35 | PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein | |||||
| JMFN017K02 | Sequence | 637 | 005859 (7) | ref|XP_004229612.1| | 1e-59 | PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein | |||||
| JMFN029A23 | Sequence | 638 | 005859 (7) | ref|XP_009783307.1| | 6e-49 | PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein | |||||
| JMFN032E03 | Sequence | 626 | 005859 (7) | ref|XP_004229612.1| | 9e-60 | PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein | |||||
| JMFN039K19 | Sequence | 596 | 005859 (7) | ref|XP_004229612.1| | 1e-50 | PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein | |||||
| JMSF001A20 | Sequence | 307 | 005859 (7) | emb|CDP07749.1| | 1e-07 | unnamed protein product [Coffea canephora] | 773 | 005859 (7) | ref|XP_004229612.1| | 7e-63 | PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein |
This contig is upended
. : . : . : . : . : . :
rJMSF001A20- ACAAATCTTTTATCTATCATTTCGA
____________________________________________________________
consensus ACAAATCTTTTATCTATCATTTCGA
. : . : . : . : . : . :
rJMSF001A20- AGAAAAAAAAAGTGAAAAATCTGAAATAAGATTAATCATCCCATGAATAACAATCGCTAG
____________________________________________________________
consensus AGAAAAAAAAAGTGAAAAATCTGAAATAAGATTAATCATCCCATGAATAACAATCGCTAG
. : . : . : . : . : . :
rJMSF001A20- AGCGAGATTTTATCATCACAACAATTTAATTACGAATTTCTCTTCACTTTTTTCGATTCA
____________________________________________________________
consensus AGCGAGATTTTATCATCACAACAATTTAATTACGAATTTCTCTTCACTTTTTTCGATTCA
. : . : . : . : . : . :
rJMSF001A20- TTTCTCTCCCTAGAGAGCAACAAACAAGAGCGGAAACAGCTGCGGAGATCGATGGAGGTA
____________________________________________________________
consensus TTTCTCTCCCTAGAGAGCAACAAACAAGAGCGGAAACAGCTGCGGAGATCGATGGAGGTA
. : . : . : . : . : . :
rJMSF001A20- TCGATCTCCCTTCCCCAGCTACGTTCCGTTTCCAATCCCACGTCCAGTAGATACGCCGTG
____________________________________________________________
consensus TCGATCTCCCTTCCCCAGCTACGTTCCGTTTCCAATCCCACGTCCAGTAGATACGCCGTG
. : . : . : . : . : . :
rJMSF001A20- TTATTTCGTGTTTCCACCTTCAGAGTTTGAAGATCTTGGCGGCCCTCACGACAGGATTCT
JMFN032E03+ GCGGCCCTCACGACAGGATTCT
JMFN017K02+ GCGGCCCTCACGACAGGATTCT
____________________________________________________________
consensus TTATTTCGTGTTTCCACCTTCAGAGTTTGAAGATCTTGGCGGCCCTCACGACAGGATTCT
. : . : . : . : . : . :
rJMSF001A20- CCCTCGCGATGGCCTCCCGGCCGGCGGCTTTGTAGTCGTAACTGCAGTCGTGTCGGTCGG
JMFN032E03+ CCCTCGCGATGGCCTCCCGGCCGGCGGCTTTGTAGTCGTAACTGCAGTCGTGTCGGTCGG
JMFN029A23+ CCCGGCCGGCGGCTTTGTAGTCGTAACTGCAGTCGTGTCGGTCGG
JMFN017K02+ CCCTCGCGATGGCCTCCCGGCCGGCGGCTTTGTAGTCGTAACTGCAGTCGTGTCGGTCGG
JMFN039K19+ CTCGCGATGGCCTCCCGGCCGGCGGCTTNGTAGTCGTAACTGCAGTCGTGTCGGTCGG
____________________________________________________________
consensus CCCTCGCGATGGCCTCCCGGCCGGCGGCTTTGTAGTCGTAACTGCAGTCGTGTCGGTCGG
. : . : . : . : . : . :
rJMSF001A20- AGTACCGGTGCTCTCCGCAGAAGAGCTCGCCGCACCGGCAACGGAATCCGGTCAAGCCGA
JMFN032E03+ AGTACCGGTGCTCTCCGCAGAAGAGCTCGCCGCACCGGCAACGGAATCCGGTCAAGCCGA
JMFN029A23+ AGTACCGGTGCTCTCCGCAGAAGAGCTCGCCGCACCGGCAACGGAATCCGGTCAAGCCGA
JMFN017K02+ AGTACCGGTGCTCTCCGCAGAAGAGCTCGCCGCACCGGCAACGGAATCCGGTCAAGCCGA
JMFN039K19+ AGTACCGGTGCTCTCCGCAGAAGAGCTCGCCGCACCGGCAACGGAATCCGGTCAAGCCGA
JMCP001B06+ TACCGGTGCTCTCCGCAGAAGAGCTCGCCGCACCGGCAACGGAATCCGGTCAAGCCGA
____________________________________________________________
consensus AGTACCGGTGCTCTCCGCAGAAGAGCTCGCCGCACCGGCAACGGAATCCGGTCAAGCCGA
. : . : . : . : . : . :
rJMSF001A20- CCTTCCTCCGGCAGCCGGAGCAACGGTTCACCTCTCTCTTCGCAGGAGCCGGCGAGCTCT
JMFN032E03+ CCTTCCTCCGGCAGCCGGAGCAACGGTTCACCTCTCTCTTCGCAGGAGCCGGCGAGCTCT
JMFN029A23+ CCTTCCTCCGGCAGCCGGAGCAACGGTTCACCTCTCTCTTCGCAGGAGCCGGCGAGCTCT
JMFN017K02+ CCTTCCTCCGGCAGCCGGAGCAACGGTTCACCTCTCTCTTCGCAGGAGCCGGCGAGCTCT
JMFN039K19+ CCTTCCTCCGGCAGCCGGAGCAACGGTTCACCTCTCTCTTCGCAGGAGCCGGCGAGCTCT
JMCP001B06+ CCTTCCTCCGGCAGCCGGAGCAACGGTTCACCTCTCTCTTCGCAGGAGCCGGCGAGCTCT
____________________________________________________________
consensus CCTTCCTCCGGCAGCCGGAGCAACGGTTCACCTCTCTCTTCGCAGGAGCCGGCGAGCTCT
. : . : . : . : . : . :
rJMSF001A20- CTCCGGTTTTCTCGTCGATTTTGTCCGTCGAATCTTCCAGCTTCTTCAGATCTGGAACCG
JMFN032E03+ CTCCGGTTTTCTCGTCGATTTTGTCCGTCGAATCTTCCAGCTTCTTCAGATCTGGAACCG
JMFN029A23+ CTCCGGTTTTCTCGTCGATTTTGTCCGTCGAATCTTCCAGCTTCTTCAGATCTGGAACCG
JMFN017K02+ CTCCGGTTTTCTCGTCGATTTTGTCCGTCGAATCTTCCAGCTTCTTCAGATCTGGAACCG
JMFN039K19+ CTCCGGTTTTCTCGTCGATTTTGTCCGTCGAATCTTCCAGCTTCTTCAGATCTGGAACCG
JMCP001B06+ CTCCGGTTTTCTCGTCGATTTTGTCCGTCGAATCTTCCAGCTTCTTCAGATCTGGAACCG
____________________________________________________________
consensus CTCCGGTTTTCTCGTCGATTTTGTCCGTCGAATCTTCCAGCTTCTTCAGATCTGGAACCG
. : . : . : . : . : . :
rJMSF001A20- TTCTCCCGGGAGAAGTCCTCCGGAAGGTAGATCTAGGCGACTTCTCGGCGAACTTGTGCG
JMFN032E03+ TTCTCCCGGGAGAAGTCCTCCGGAAGGTAGATCTAGGCGACTTCTCGGCGAACTTGTGCG
JMFN029A23+ TTCTCCCGGGAGAAGTCCTCCGGAAGGTAGATCTAGGCGACTTCTCGGCGAACTTGTGCG
JMFN017K02+ TTCTCCCGGGAGAAGTCCTCCGGAAGGTAGATCTAGGCGACTTCTCGGCGAACTTGTGCG
JMFN039K19+ TTCTCCCGGGAGAAGTCCTCCGGAAGGTAGATCTAGGCGACTTCTCGGCGAACTTGTGCG
JMCP001B06+ TTCTCCCGGGAGAAGTCCTCCGGAAGGTAGATCTAGGCGACTTCTCGGCGAACTTGaGCG
____________________________________________________________
consensus TTCTCCCGGGAGAAGTCCTCCGGAAGGTAGATCTAGGCGACTTCTCGGCGAACTTGTGCG
. : . : . : . : . : . :
rJMSF001A20- GAATCGGCACTGTTGACGCCGCGACGGAGCTGGAGGTAGACGCAGCCGTGGTGGCGTTGA
JMFN032E03+ GAATCGGCACTGTTGACGCCGCGACGGAGCTGGAGGTAGACGCAGCCGTGGTGGCGTTGA
JMFN029A23+ GAATCGGCACTGTTGACGCCGCGACGGAGCTGGAGGTAGACGCAGCCGTGGTGGCGTTGA
JMSF001A20+ CACTGTTGACGCCGCGACGGAGCTGGAGGTAGACGCAGCCGTGGTGGCGTTGA
JMFN017K02+ GAATCGGCACTGTTGACGCCGCGACGGAGCTGGAGGTAGACGCAGCCGTGGTGGCGTTGA
JMFN039K19+ GAATCGGCACTGTTGACGCCGCGACGGAGCTGGAGGTAGACGCAGCCGTGGTGGCGTTGA
JMCP001B06+ GAATCGGCAgTGTTGACGCCGCGACGGAGgTGGAGGTAGACGCAGCCGTGGTGGCGTTGA
____________________________________________________________
consensus GAATCGGCACTGTTGACGCCGCGACGGAGCTGGAGGTAGACGCAGCCGTGGTGGCGTTGA
. : . : . : . : . : . :
rJMSF001A20- AGCACTTCTGACACATGCTGTTGGTGGCCGGGTTCCCGGTCACGCCGCAGTTGTTGACGC
JMFN032E03+ AGCACTTCTGACACATGCTGTTGGTGGCCGGGTTCCCGGTCACGCCGCAGTTGTTGACGC
JMFN029A23+ AGCACTTCTGACACATGCTGTTGGTGGCCGGGTTCCCGGTCACGCCGCAGTTGTTGACGC
JMSF001A20+ AGCACTTCTGACACATGCTGTTGGTGGCCGGGTTCCCGGTCACGCCGCAGTTGTTGACGC
JMFN017K02+ AGCACTTCTGACACATGCTGTTGGTGGCCGGGTTCCCGGTCACGCCGCAGTTGTTGACGC
JMFN039K19+ AGCACTTCTGACACATGCTGTTGGTGGCCGGGTTCCCGGTCACGCCGCAGTTGTTGACGC
JMCP001B06+ AGCACTTCTGACACATGCTGTTGGTGGCCGGGTTCCCGGTCAgcgCGgtcTCGTTGACGC
____________________________________________________________
consensus AGCACTTCTGACACATGCTGTTGGTGGCCGGGTTCCCGGTCACGCCGCAGTTGTTGACGC
. : . : . : . : . : . :
rJMSF001A20- ACGGCGTTATGGTCTCAGGTACCACCTT
JMFN032E03+ ACGGCGTTATGGTCTCAGGTACCACCTTGAACTCCGTCTCCTCCTTCTCCGTCTTCTGTA
JMFN029A23+ ACGGCGTTATGGTCTCAGGTACCACCTTGAACTCCGTCTCCTCCTTCTCCGTCTTCTGTA
JMSF001A20+ ACGGCGTTATGGTCTCAGGTACCACCTTGAACTCCGTCTCCTCCTTCTCCGTCTTCTGTA
JMFN017K02+ ACGGCGTTATGGTCTCAGGTACCACCTTGAACTCCGTCTCCTCCTTCTCCGTCTTCTGTA
JMFN039K19+ ACGGCGTTATGGTCTCAGGTACCACCTTGAACTCCGTCTCCTCCTTCTCCGTCTTCTGTA
JMCP001B06+ ACGGCGTTATGGTCTCAGGTACCAggaaGAACTCCGTCTCCTCCTTCTCCGTCTTCTGTA
____________________________________________________________
consensus ACGGCGTTATGGTCTCAGGTACCACCTTGAACTCCGTCTCCTCCTTCTCCGTCTTCTGTA
. : . : . : . : . : . :
JMFN032E03+ CCATTTTCACAACAACAAAAATTTCTCAAAAGAAAAAAACAAACGATTTCTGTATGAA
JMFN029A23+ CCATTTTCACAACAA
JMSF001A20+ CCATTTTCACAACAA
JMFN017K02+ CCATTTTCACAACAACAAAAATTTCTCAAAAGAAAAAAACAAACGATTTCTGTATGAA
JMFN039K19+ CCATTTTCACAACAACAAAAATTTCTCAAAAGAAAAAAACAAACGATTTCTGTATGAACA
JMCP001B06+ CCATTTTCACAACAACAAAAATTTCTCAAAAGAAAAAAACAAACGtaaTgacTATGAACA
____________________________________________________________
consensus CCATTTTCACAACAACAAAAATTTCTCAAAAGAAAAAAACAAACGATTTCTGTATGAACA
. : . : . : . : . : . :
JMFN039K19+ ATTCTAGAGAGAGAGAGCTGAGGTTGAAGTAAACGGAGAGAGAGAGAGATATAGGAAG
JMCP001B06+ ATTCTAGAGAGAGAGAGCTGAGGTTGAAG-AAACGGAGAGAGAGAGAGATATAGGAAGCG
____________________________________________________________
consensus ATTCTAGAGAGAGAGAGCTGAGGTTGAAGTAAACGGAGAGAGAGAGAGATATAGGAAGCG
. : . : . : . : . : . :
JMCP001B06+ AGTCGGATTTGGGTTGGGTTTGAGGAcACGAGAGGAGATTTAAGGGGGGGAGAGAGATCG
____________________________________________________________
consensus AGTCGGATTTGGGTTGGGTTTGAGGAGACGAGAGGAGATTTAAGGGGGGGAGAGAGATCG