Contig 005443:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028G11Sequence526000773 (13)gb|KDO78068.1|1e-29hypothetical protein CISIN_1g0026402mg, partial [Citrus sinensis]300005443 (7)
JMFS167D03Sequence587005443 (7)emb|CDP17325.1|2e-52unnamed protein product [Coffea canephora]
JMSF026F23Sequence656000773 (13)ref|XP_009614041.1|7e-32PREDICTED: uncharacterized protein LOC104107048 isoform X2 [Nicotiana tomentosi677005443 (7)emb|CDP17325.1|6e-54unnamed protein product [Coffea canephora]
JMSF027B21Sequence681000773 (13)ref|XP_009614041.1|2e-40PREDICTED: uncharacterized protein LOC104107048 isoform X2 [Nicotiana tomentosi671005443 (7)gb|KDO78075.1|3e-47hypothetical protein CISIN_1g0026401mg, partial [Citrus sinensis]
JMSF043I04Sequence751000773 (13)ref|XP_009614041.1|5e-55PREDICTED: uncharacterized protein LOC104107048 isoform X2 [Nicotiana tomentosi639005443 (7)emb|CDP17325.1|5e-44unnamed protein product [Coffea canephora]
JMSF050K22Sequence693000773 (13)ref|XP_009614041.1|1e-43PREDICTED: uncharacterized protein LOC104107048 isoform X2 [Nicotiana tomentosi765005443 (7)emb|CDP17325.1|4e-65unnamed protein product [Coffea canephora]
JMSF052M01Sequence666000773 (13)ref|XP_009614041.1|8e-37PREDICTED: uncharacterized protein LOC104107048 isoform X2 [Nicotiana tomentosi912005443 (7)ref|XP_009785963.1|2e-100PREDICTED: uncharacterized protein LOC104234138 isoform X3 [Nicotiana sylvestri

Alignment

This contig is upended


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rJMSF052M01+                     GCTCTACCGCAACACCTTGCTGTGCATCCATATTCTCAACCGACGCTTC
                      ____________________________________________________________
consensus                        GCTCTACCGCAACACCTTGCTGTGCATCCATATTCTCAACCGACGCTTC
 
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rJMSF052M01+          CTTTGGGACCTTTTGCAAACATAATTAGCTATCCTTTTATGCATCAGAGCTATACATATA
                      ____________________________________________________________
consensus             CTTTGGGACCTTTTGCAAACATAATTAGCTATCCTTTTATGCATCAGAGCTATACATATA
 
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rJMSF052M01+          TGCCTCCGGGTTTCCAACAACCATTTGCTGGTAACAGTACTTACCAACAGTCTCTGGCAG
rJMSF050K22+                                                                 GGCAG
                      ____________________________________________________________
consensus             TGCCTCCGGGTTTCCAACAACCATTTGCTGGTAACAGTACTTACCAACAGTCTCTGGCAG
 
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rJMSF052M01+          CAGTGCTCCCGAACTACAAGAACAGCGTATCAGTAAGCAGCTTGCCTCACTCTGCTACTG
rJMSF050K22+          CAGTGCTCCCGAACTACAAGAACAGCGTATCAGTAAGCAGCTTGCCTCACTTTGCTACTG
                      ____________________________________________________________
consensus             CAGTGCTCCCGAACTACAAGAACAGCGTATCAGTAAGCAGCTTGCCTCACTTTGCTACTG
 
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rJMSF052M01+          TTCCTTCAGGATACGGTGCCTTTGGAAACACCGGCACAATTCCTGGGAGCTTCCCGTTGA
JMFS167D03-                        CGGTGCCTTTGGAAACACCGGCACAATTCCTGGGAGCTTCCCGTTGA
rJMSF026F23+              TTCAGGATACGGTGCCTTTGGAAACACCGGCACAATTCCTGGGAGCTTCCCGTTGA
rJMSF050K22+          TTCCTTCAGGATACGGTGCCTTTGGAAACACCGGCACAATTCCTGGGAGCTTCCCGTTGA
rJMSF027B21+                                                           CTTCCCGTTGA
                      ____________________________________________________________
consensus             TTCCTTCAGGATACGGTGCCTTTGGAAACACCGGCACAATTCCTGGGAGCTTCCCGTTGA
 
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rJMSF052M01+          ATCCTTCTGCTGCTCCGAGTACATCTTTGGGTATTGATGACGGGCTTAGTTCTCAATACA
JMFS167D03-           ATCCTTCTGCTGCTCCGAGTACATCTTTGGGTATTGATGACGGGCTTAGTTCTCAATACA
rJMSF026F23+          ATCCTTCTGCTGCTCCGAGTACATCTTTGGGTATTGATGACGGGCTTAGTTCTCAATACA
rJMSF050K22+          ATCCTTCTGCTGCTCCGAGTACATCTTTGGGTATTGATGACGGGCTTAGTTCTCAATACA
rJMSF043I04+                     GCTCCGAGTACATCTTTGGGTATTGATGACGGGCTTAGTTCTCAATACA
rJMSF027B21+          ATCCTTCTGCTGCTCCGAGTACATCTTTGGGTATTGATGACGGGCTTAGTTCTCAATACA
                      ____________________________________________________________
consensus             ATCCTTCTGCTGCTCCGAGTACATCTTTGGGTATTGATGACGGGCTTAGTTCTCAATACA
 
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rJMSF052M01+          AGGACAACCATCATTTAATGTCTCTTCAACAGGTTGAGAATTCAGGTATGTGGCTCCACG
JMFS167D03-           AGGACAACCATCATTTAATGTCTCTTCAACAGGTTGAGAATTCAGGTATGTGGCTCCACG
rJMSF026F23+          AGGACAACCATCATTTAATGTCTCTTCAACAGGTTGAGAATTCAGGTATGTGGCTCCACG
rJMSF050K22+          AGGACAACCATCATTTAATGTCTCTTCAACAGGTTGAGAATTCAGGTATGTGGCTCCACG
rJMSF043I04+          AGGACAACCATCATTTAATGTCTCTTCAACAGGTTGAGAATTCAGGTATGTGGCTCCACG
rJMSF027B21+          AGGACAACCATCATTTAATGTCTCTTCAACAGGTTGAGAATTCAGGTATGTGGCTCCACG
                      ____________________________________________________________
consensus             AGGACAACCATCATTTAATGTCTCTTCAACAGGTTGAGAATTCAGGTATGTGGCTCCACG
 
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rJMSF052M01+          GCCATGGCTCCCGAACAATGTCAGCTGCTCCTGCCAATACATACTACAATATCCAGGCGC
JMFS167D03-           GCCATGGCTCCCGAACAATGTCAGCTGCTCCTGCCAATACATACTACAATATCCAGGCGC
rJMSF026F23+          GCCATGGCTCCCGAACAATGTCAGCTGCTCCTGCCAATACATACTACAATATCCAGGCGC
rJMSF050K22+          GCCATGGCTCCCGAACAATGTCAGCTGCTCCTGCCAATACATACTACAATATCCAGGCGC
rJMSF043I04+          GCCATGGCTCCCGAACAATGTCAGCTGCTCCTGCCAATACATACTACAATATCCAGGCGC
rJMSF027B21+          GCCATGGCTCCCGAACAATGTCAGCTGCTCCTGCCAATACATACTACAATATCCAGGCGC
                      ____________________________________________________________
consensus             GCCATGGCTCCCGAACAATGTCAGCTGCTCCTGCCAATACATACTACAATATCCAGGCGC
 
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rJMSF052M01+          AAAACCAGCAACCCAGTGGCTTCCGGCAAGTTCAACAGCCATCTCAAAACTATGCATCGT
JMFS167D03-           AAAACCAGCAACCCAGTGGCTTCCGGCAAGTTCAACAGCCATCTCAAAACTATGCATCGT
rJMSF026F23+          AAAACCAGCAACCCAGTGGCTTCCGGCAAGTTCAACAGCCATCTCAAAACTATGCATCGT
rJMSF050K22+          AAAACCAGCAACCCAGTGGCTTCCGGCAAGTTCAACAGCCATCTCAAAACTATGCATCGT
rJMSF043I04+          AAAACCAGCAACCCAGTGGCTTCCGGCAAGTTCAACAGCCACCTCAAAACTATGCATCGT
rJMSF027B21+          AAAACCAGCAACCCAGTGGCTTCCGGCAAGTTCAACAGCCATCTCAAAACTATGCATCGT
                      ____________________________________________________________
consensus             AAAACCAGCAACCCAGTGGCTTCCGGCAAGTTCAACAGCCATCTCAAAACTATGCATCGT
 
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rJMSF052M01+          TGGGCTACAACCCAAACTTCTACCATTCCCAAACCGGGATCTCGCTGGACCACCACCACC
JMFS167D03-           TGGGCTACAACCCAAACTTCTACCATTCCCAAACCGGGATCTCGCTGGACCACCACCACC
rJMSF026F23+          TGGGCTACAACCCAAACTTCTACCATTCCCAAACCGGGATCTCGCTGGACCACCACCACC
rJMSF050K22+          TGGGCTACAACCCAAACTTCTACCATTCCCAAACCGGGATCTCGCTGGACCACCACCACC
rJMSF043I04+          TGGGCTACAACCCAAACTTCTACCATTCCCAAACTGGGATCTCGCTGGACCACCACCACC
rJMSF027B21+          TGGGCTACAACCCAAACTTCTACCATTCCCAAACCGGGATCTCGCTGGACCACCACCACC
                      ____________________________________________________________
consensus             TGGGCTACAACCCAAACTTCTACCATTCCCAAACCGGGATCTCGCTGGACCACCACCACC
 
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rJMSF052M01+          AGCAGCAGAACCCTAGAGACGGCCCGTTGGGCGGCGGTGGCGGCAACGCTCAAGTCCAGC
JMFS167D03-           AGCAGCAGAACCCTAGAGACGGCCCGTTGGGCGGCGGTGGCGGCAACGCTCAAGTCCAGC
rJMSF026F23+          AGCAGCAGAACCCTAGAGACGGCCCGTTGGGCGGCGGTGGCGGCAACGCTCAAGTCCAGC
rJMSF050K22+          AGCAGCAGAACCCTAGAGACGGCCCGTTGGGCGGCGGTGGCGGCAACGCTCAAGTCCAGC
rJMSF043I04+          AGCAGCAGAACCCTAGAGACGGCCCGTTGGGCGGCGGTGGCGGCAACGCTCAAGTCCAGC
rJMSF027B21+          AGCAGCAGAACCCTAGAGACGGCCCGTTGGGCGGCGGTGGCGGCAACGCTCAAGTCCAGC
                      ____________________________________________________________
consensus             AGCAGCAGAACCCTAGAGACGGCCCGTTGGGCGGCGGTGGCGGCAACGCTCAAGTCCAGC
 
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rJMSF052M01+          CTAAGCCATCATCCCAACAGCTGTGGCAAAACAGCTACTAATCTTACTCCCTCCCTACTC
JMFS167D03-           CTAAGCCATCATCCCAACAGCTGTGGCAAAACAGCTACTAATCTTACTCCCTCCCTACTC
rJMSF026F23+          CTAAGCCATCATCCCAACAGCTGTGGCAAAACAGCTACTAATCTTACTCCCTCCCTACTC
rJMSF050K22+          CTAAGCCATCATCCCAACAGCTGTGGCAAAACAGCTACTAATCTTACTCCCTCCCTACTC
rJMSF043I04+          CTAAGCCATCATCCCAACAGCTGTGGCAAAACAGCTACTAATCTTACTCCCTCCCTACTC
rJMSF027B21+          CTAAGCCATCATCCCAACAGCTGTGGCAAAACAGCTACTAATCTTACTCCCTCCCTACTC
                      ____________________________________________________________
consensus             CTAAGCCATCATCCCAACAGCTGTGGCAAAACAGCTACTAATCTTACTCCCTCCCTACTC
 
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rJMSF052M01+          CCTAGTGCCTCCGGGTTTTTCAGGGTTTGTAATGATAAAGAAGTTGCCCCTCAAGCTTGT
JMFS167D03-           CCTAGTGCCTCCGGGTTTTTCAGGGTTTGTAATGATAAAGAAGTTGCCCCTCAAGCTTGT
rJMSF026F23+          CCTAGTGCCTCCGGGTTTTTCAGGGTTTGTAATGATAAAGAAGTTGCCCCTCAAGCTTGT
rJMSF050K22+          CCTAGTGCCTCCGGGTTTTTCAGGGTTTGTAATGATAAAGAAGTTGCCCCTCAAGCTTGT
rJMSF043I04+          CCTAGTGCCTCCGGGTTTTTCAGGGTTTGTAATGATAAAGAAGTTGCCCCTCAAGCTTGT
rJMSF027B21+          CCTAGTGCCTCCGGGTTTTTCAGGGTTTGTAATGATAAAGAAGTTGCCCCTCAAGCTTGT
rJMFF028G11+            TAGTGCATCCGGGTTTTTCAGGGTTTGTAATGATAAAGAAGTTGCCCCTCAAGCTTGT
                      ____________________________________________________________
consensus             CCTAGTGCCTCCGGGTTTTTCAGGGTTTGTAATGATAAAGAAGTTGCCCCTCAAGCTTGT
 
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rJMSF052M01+          GGCCGCGGCAATAATCCATATTTTCGACGCCCAAAGCTTGTGTGGCTGCTGCCCTGTACT
JMFS167D03-           GGCCGCGGCAATAATCCATATTTTCGACGCCCAAAGCTTGTGTGGCTGCTGCCCTGTACT
rJMSF026F23+          GGCCGCGGCAATAATCCATATTTTCGACGCCCAAAGCTTGTGTGGCTGCTGCCCTGTACT
rJMSF050K22+          GGCCGCGGCAATAATCCATATTTTCGACGCCCAAAGCTTGTGTGGCTGCTGCCCTGTACT
rJMSF043I04+          GGCCGCGGCAATAATCCATATTTTCGACGCCCAAAGCTTGTGTGGCTGCTGCCCTGTACT
rJMSF027B21+          GGCCGCGGCAATAATCCATATTTTCGACGCCCAAAGCTTGTGTGGCTGCTGCCCTGTACT
rJMFF028G11+          GGCCGCGGCAATAATCCATATTTTCGACGCNCAAAGCTTGTGTGGNGGCTGCCCTGTACT
                      ____________________________________________________________
consensus             GGCCGCGGCAATAATCCATATTTTCGACGCCCAAAGCTTGTGTGGCTGCTGCCCTGTACT
 
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rJMSF052M01+          TAGAGTCTTAGAGGTTGTATTTTACGTTTTCTTTCCGTTATATCATCAGTTAATGTAGTA
rJMSF026F23+          TAGAGTCTTAGAGGTTGTATTTTACGTTTTCTTTCCGTTATATCATCAGTTAATGTAGTA
rJMSF050K22+          TAGAGTCTTAGAGGTTGTATTTTACGTTTTCTTTCCGTTATATCATCAGTTAATGTAGTA
rJMSF043I04+          TAGAGTCTTAGAGGTTGTATTTTACGTTTTCTTTCCGTTATATCATCAGTTAATGTAGTA
rJMSF027B21+          TAGAGTCTTAGAGGTTGTATTTTACGTTTTCTTTCCGTTATATCATCAGTTAATGTAGTA
rJMFF028G11+          TAGAGTNTTAGAGGTTGTATTTTACGTTTTCTTTCCGTTATATCATCAGTTAATGTAGTA
                      ____________________________________________________________
consensus             TAGAGTCTTAGAGGTTGTATTTTACGTTTTCTTTCCGTTATATCATCAGTTAATGTAGTA
 
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rJMSF052M01+          TAGGGATATGCAAG                                              
rJMSF026F23+          TAGGGATATGCAAGCTAAGTT                                       
rJMSF050K22+          TAGGGATATGCAAGCTAAGTTGGTGTTAGTGGGATTCT                      
rJMSF043I04+          TAGGGATATGCAAGCTAAGTTGGTGTTAGTGGGATTCTTGTGCTTCTGTT          
rJMSF027B21+          TAGGGATATGCAAGCTAAGTTGGTGTTAGTGGGATTCTTGTGCTTCTGTTTGAATTTT  
rJMFF028G11+          TAGGGATATGCAAGNTAAGTTGGTGTTAGTGGGATTCTTGTGCTTCTGTTTGAATTTTTC
                      ____________________________________________________________
consensus             TAGGGATATGCAAGCTAAGTTGGTGTTAGTGGGATTCTTGTGCTTCTGTTTGAATTTTTC
 
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rJMFF028G11+          CTTTTTTCTTCCCCCTCNCAGTTATCAACAACATCCTGCTCCTATACCCACCCTCTGCNC
                      ____________________________________________________________
consensus             CTTTTTTCTTCCCCCTCNCAGTTATCAACAACATCCTGCTCCTATACCCACCCTCTGCNC