Contig 005300:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS001D10Sequence603005300 (4)ref|XP_009761121.1|6e-70PREDICTED: transducin beta-like protein 2 [Nicotiana sylvestris]
JMSF016I14Sequence552005300 (4)ref|XP_009761121.1|2e-55PREDICTED: transducin beta-like protein 2 [Nicotiana sylvestris]795007079 (3)ref|XP_009761121.1|2e-55PREDICTED: transducin beta-like protein 2 [Nicotiana sylvestris]
JMSF037P22Sequence708005300 (4)ref|XP_009761121.1|1e-73PREDICTED: transducin beta-like protein 2 [Nicotiana sylvestris]665007079 (3)ref|XP_009761121.1|3e-70PREDICTED: transducin beta-like protein 2 [Nicotiana sylvestris]
JMSF049C15Sequence672005300 (4)ref|XP_006396207.1|7e-27hypothetical protein EUTSA_v10028676mg [Eutrema salsugineum] gb|ESQ37660.1| hypo762007079 (3)ref|XP_011090700.1|7e-94PREDICTED: transducin beta-like protein 2 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF037P22+ ACTCCCATCAGCAGTACCATAAGTAGCCTTGGTACTA
                      ____________________________________________________________
consensus ACTCCCATCAGCAGTACCATAAGTAGCCTTGGTACTA
 
. : . : . : . : . : . :
JMSF037P22+ AACAGAGTGAGGACAGCCCTCTGGTCATGGATTTTATGGTGCTCCCATTTCATTTCTGGT
                      ____________________________________________________________
consensus AACAGAGTGAGGACAGCCCTCTGGTCATGGATTTTATGGTGCTCCCATTTCATTTCTGGT
 
. : . : . : . : . : . :
JMSF037P22+ AGAGGCAACTTGGTCTGTTGTGTGCCATCAGTGGCTGCTTTTGGTTCCCCATACATGTAT
                      ____________________________________________________________
consensus AGAGGCAACTTGGTCTGTTGTGTGCCATCAGTGGCTGCTTTTGGTTCCCCATACATGTAT
 
. : . : . : . : . : . :
JMSF037P22+ AGAGAGGAACCAGAAAAGGCTGGGCATGCTACAACTATTGAAGATTTTTCATCAGCAAAT
                      ____________________________________________________________
consensus AGAGAGGAACCAGAAAAGGCTGGGCATGCTACAACTATTGAAGATTTTTCATCAGCAAAT
 
. : . : . : . : . : . :
JMSF037P22+ GCAACTGCAGATGTATGACCTCCAGCAGGTAAATTAATCCTCAAAAACTTAAAGCTTTAC
                      ____________________________________________________________
consensus GCAACTGCAGATGTATGACCTCCAGCAGGTAAATTAATCCTCAAAAACTTAAAGCTTTAC
 
. : . : . : . : . : . :
JMSF037P22+ TTGTCGCATCATCCAACTTGAATACCCTCACAATTCCATCCGCACAAGCAGTCGCCAAAC
JMSF016I14+ CAGTCGCCAAAC
JMFS001D10+ CAGTCGCCAAAC
JMSF049C15+ CAGTCGCCAAAC
                      ____________________________________________________________
consensus TTGTCGCATCATCCAACTTGAATACCCTCACAATTCCATCCGCACAAGCAGTCGCCAAAC
 
. : . : . : . : . : . :
JMSF037P22+ TACATCCATCTGATGAGAAACAAATCCCCGTGACAGAATCTCCATGACCTTTTAGAGTAT
JMSF016I14+ TACATCCATCTGATGAGAAACAAATCCCCGTGACAGAATCTCCATGACCTTTTAGAGTAT
JMFS001D10+ TACATCCATCTGATGAGAAACAAATCCCCGTGACAGAATCTCCATGACCTTTTAGAGTAT
JMSF049C15+ TACATCCATCTGATGAGAAACAAATCCCCGTGACAGAATCTCCATGACCTTTTAGAGTAT
                      ____________________________________________________________
consensus TACATCCATCTGATGAGAAACAAATCCCCGTGACAGAATCTCCATGACCTTTTAGAGTAT
 
. : . : . : . : . : . :
JMSF037P22+ TCAAATCCAGTGGATGATGCCGTTTGTTCGAGTCCTTATCGGCGGCGGCGTGAGAGTGAG
JMSF016I14+ TCAAATCCAGTGGATGATGCCGTTTGTTCGAGTCCTTATCGGCGGCGGCGTGAGAGTGAG
JMFS001D10+ TCAAATCCAGTGGATGATGCCGTTTGTTCGAGTCCTTATCGGCGGCGGCGTGAGAGTGAG
JMSF049C15+ TCAAATCCAGTGGATGATGCCGTTTGTTCGAGTCCTTATCGGCGGCGGCGTGAGAGTGAG
                      ____________________________________________________________
consensus TCAAATCCAGTGGATGATGCCGTTTGTTCGAGTCCTTATCGGCGGCGGCGTGAGAGTGAG
 
. : . : . : . : . : . :
JMSF037P22+ ACTTGGAATGAGATTTCTTAGAGGTGTGATGCGACTGCTGCGAATGCCTCGGAGTAGGAG
JMSF016I14+ ACTTGGAATGAGATTTCTTAGAGGTGTGATGCGACTGCTGCGAATGCCTCGGAGTAGGAG
JMFS001D10+ ACTTGGAATGAGATTTCTTAGAGGTGTGATGCGACTGCTGCGAATGCCTCGGAGTAGGAG
JMSF049C15+ ACTTGGAATGAGATTTCTTAGAGGTGTGATGCGACTGCTGCGAATGCCTCGGAGTAGGAG
                      ____________________________________________________________
consensus ACTTGGAATGAGATTTCTTAGAGGTGTGATGCGACTGCTGCGAATGCCTCGGAGTAGGAG
 
. : . : . : . : . : . :
JMSF037P22+ AAGGCTTCTGATTGGGCTGAACAGCATCAGCCTTAGAGATCGATTCCACTTCGGATTTCC
JMSF016I14+ AAGGCTTCTGATTGGGCTGAACAGCATCAGCCTTAGAGATCGATTCCACTTCGGATTTCC
JMFS001D10+ AAGGCTTCTGATTGGGCTGAACAGCATCAGCCTTAGAGATCGATTCCACTTCGGATTTCC
JMSF049C15+ AAGGCTTCTGATTGGGCTGAACAGCATCAGCCTTAGAGATCGATTCCACTTCGGATTTCC
                      ____________________________________________________________
consensus AAGGCTTCTGATTGGGCTGAACAGCATCAGCCTTAGAGATCGATTCCACTTCGGATTTCC
 
. : . : . : . : . : . :
JMSF037P22+ TATTCCGGAAATAGTTCCCGAATGCAAGAAATGCAATAATAGCTCCGAGAATCACCGATA
JMSF016I14+ TATTCCGGAAATAGTTCCCGAATGCAAGAAATGCAATAATAGCTCCGAGAATCACCGATA
JMFS001D10+ TATTCCGGAAATAGTTCCCGAATGCAAGAAATGCAATAATAGCTCCGAGAATCACCGATA
JMSF049C15+ TATTCCGGAAATAGTTCCCGAATGCAAGAAATGCAATAATAGCTCCGAGAATCACCGATA
                      ____________________________________________________________
consensus TATTCCGGAAATAGTTCCCGAATGCAAGAAATGCAATAATAGCTCCGAGAATCACCGATA
 
. : . : . : . : . : . :
JMSF037P22+ CAATCGCCACCGGAACAATCGCGTCCATCGCCGGAACCCAACTATCAACACCGCTGATCA
JMSF016I14+ CAATCGCCACCGGAACAATCGCGTCCATCGCCGGAACCCAACTATCAACACCGCTGATCA
JMFS001D10+ CAATCGCCACCGGAACAATCGCGTCCATCGCCGGAACCCAACTATCAACACCGCTGATCA
JMSF049C15+ CAATCGCCACCGGAACAATCGCGTCCATCGCCGGAACCCAACTATCAACACCGCTGATCA
                      ____________________________________________________________
consensus CAATCGCCACCGGAACAATCGCGTCCATCGCCGGAACCCAACTATCAACACCGCTGATCA
 
. : . : . : . : . : . :
JMSF037P22+ GAATTTCAGT
JMSF016I14+ GAATTTCAGTAGTAAGCCTTTTGCCGTGCTCTCAAGTCTTCTAGCAAGTAGCAAC
JMFS001D10+ GAATTTCAGTAGTAAGCCTTTTGCCGTGCTCTCAA
JMSF049C15+ GAATTTCAGTAGTAAGCCTTTTGCCGTGCTCTCAAGTCTTCTAGCAAGTAGCAACAGTCC
                      ____________________________________________________________
consensus GAATTTCAGTAGTAAGCCTTTTGCCGTGCTCTCAAGTCTTCTAGCAAGTAGCAACAGTCC