Contig 004998:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037C03Sequence526004998 (4)gb|AAB39828.1|9e-61chaperonin-60 beta subunit, partial [Solanum tuberosum]
JMSF010I06Sequence288004998 (4)emb|CDO97994.1|8e-11unnamed protein product [Coffea canephora]647009914 (2)ref|XP_007024263.1|2e-54TCP-1/cpn60 chaperonin family protein [Theobroma cacao] gb|EOY26885.1| TCP-1/cpn
JMSF010N23Sequence279004998 (4)126009914 (2)
JMSF012A19Sequence226004998 (4)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF037C03+ TAAATCATTTG
                      ____________________________________________________________
consensus TAAATCATTTG
 
. : . : . : . : . : . :
JMFF037C03+ TTTTTGAAGCAGCTTGCCTCACTAAACTTGCACCAATATTTTCAACAGGGTCTTCCAATT
                      ____________________________________________________________
consensus TTTTTGAAGCAGCTTGCCTCACTAAACTTGCACCAATATTTTCAACAGGGTCTTCCAATT
 
. : . : . : . : . : . :
JMFF037C03+ CAACCTCTCTAGCTACAGTTACACCATCGTTAACAATTTTTGGAGAACCATACTTGCTCT
                      ____________________________________________________________
consensus CAACCTCTCTAGCTACAGTTACACCATCGTTAACAATTTTTGGAGAACCATACTTGCTCT
 
. : . : . : . : . : . :
JMFF037C03+ CCAAAACAACATTTCTTCCTTTTGGCCCAAGAGTAACACCTACTAGGTCTGCAAGTTTGT
                      ____________________________________________________________
consensus CCAAAACAACATTTCTTCCTTTTGGCCCAAGAGTAACACCTACTAGGTCTGCAAGTTTGT
 
. : . : . : . : . : . :
JMSF010I06+ ATAGCAGAACCATCTGTGTTGAAGTACAAGTCCTTGG
JMFF037C03+ TCACACCTGCTTGCAATTTCTTGATAGCAGAACCATCTGTGTTGAAGTACAAGTCCTTGG
                      ____________________________________________________________
consensus TCACACCTGCTTGCAATTTCTTGATAGCAGAACCATCTGTGTTGAAGTACAAGTCCTTGG
 
. : . : . : . : . : . :
JMSF010I06+ CCATAGCCCGAACCTTAGATCTCTTCCGCAAGACCACATTTTTCCTCCTACCTCCTAATG
JMFF037C03+ CCATAGCCCGAACCTTAGATCTCTTCCGCAAGACCACATTTTTCCTCCTACCTCCTAATG
JMSF012A19+ CCTCCTAATG
JMSF010N23+ TCTTCCGCAAGACCACATTTTTCCTCCTACCTCCTAATG
                      ____________________________________________________________
consensus CCATAGCCCGAACCTTAGATCTCTTCCGCAAGACCACATTTTTCCTCCTACCTCCTAATG
 
. : . : . : . : . : . :
JMSF010I06+ CATTTGGAGATAATGATGCAAAAGAAGATAACGTTTCAGAAGATTTTAAAGATTTCTTTT
JMFF037C03+ CATTTGGAGATAATGATGCAAAAGAAGATAACGTTTCAGAAGATTTTAAAGATTTCTTTT
JMSF012A19+ CATTTGGAGATAATGATGCAAAAGAAGATAACGTTTCAGAAGATTTTAAAGATTTCTTTT
JMSF010N23+ CATTTGGAGATAATGATGCAAAAGAAGATAACGTTTCAGAAGATTTTAAAGATTTCTTTT
                      ____________________________________________________________
consensus CATTTGGAGATAATGATGCAAAAGAAGATAACGTTTCAGAAGATTTTAAAGATTTCTTTT
 
. : . : . : . : . : . :
JMSF010I06+ CTATCGTCTGGCTGGCAGAGACAACTGCACCAAGTGAAGACATGGCCGAGAACGTTGAAG
JMFF037C03+ CTATCGTCTGGCTGGCAGAGACAACTGCACCAAGTGAAGACATGGCCGAGAACGTTGAAG
JMSF012A19+ CTATCGTCTGGCTGGCAGAGACAACTGCACCAAGTGAAGACATGGCCGAGAACGTTGAAG
JMSF010N23+ CTATCGTCTGGCTGGCAGAGACAACTGCACCAAGTGAAGACATGGCCGAGAACGTTGAAG
                      ____________________________________________________________
consensus CTATCGTCTGGCTGGCAGAGACAACTGCACCAAGTGAAGACATGGCCGAGAACGTTGAAG
 
. : . : . : . : . : . :
JMSF010I06+ CCATACTCCACAACTAATCTTATCCTGGGATTGATTGTTTGATGAGTTGCTTTGAGGGCT
JMFF037C03+ CCATACTCCACAACTAATCTTATCCTGGGATTGATTGTTTGATGAGTTGCTTTGAGGGCT
JMSF012A19+ CCATACTCCACAACTAATCTTATCCTGGGATTGATTGTTTGATGAGTTGCTTTGAGGGCT
JMSF010N23+ CCATACTCCACAACTAATCTTATCCTGGGATTGATTGTTTGATGAGTTGCTTTGAGGGCT
                      ____________________________________________________________
consensus CCATACTCCACAACTAATCTTATCCTGGGATTGATTGTTTGATGAGTTGCTTTGAGGGCT
 
. : . : . : . : . : . :
JMSF010I06+ TTGGAAAGT
JMFF037C03+ TTGGAAAGTAGAGTGAGTGAGAGGAATAGCAGAAT
JMSF012A19+ TTGGAAAGTAGAGTGAGTGAGAGGAATAGCAGAAT
JMSF010N23+ TTGGAAAGTAGAGTGAGTGAGAGGAATAGCAGAATATAGATAAGGAAGCTCAACTTCTTC
                      ____________________________________________________________
consensus TTGGAAAGTAGAGTGAGTGAGAGGAATAGCAGAATATAGATAAGGAAGCTCAACTTCTTC