Contig 004900:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002K23Sequence264004900 (6)ref|XP_010656628.1|55.5PREDICTED: uncharacterized protein LOC104880710 [Vitis vinifera]535005512 (12)ref|XP_009789305.1|2e-52PREDICTED: serine carboxypeptidase II-2 [Nicotiana sylvestris]
JMFF038H04Sequence504004900 (6)emb|CDO99140.1|3e-17unnamed protein product [Coffea canephora]714009751 (2)emb|CDO99140.1|1e-14unnamed protein product [Coffea canephora]
JMFS155A05Sequence592004900 (6)ref|XP_009630744.1|2e-51PREDICTED: serine carboxypeptidase II-2 [Nicotiana tomentosiformis]
JMFS162E11Sequence618004900 (6)ref|XP_009630744.1|2e-51PREDICTED: serine carboxypeptidase II-2 [Nicotiana tomentosiformis]
JMFS168D08Sequence629004900 (6)ref|XP_009630744.1|2e-51PREDICTED: serine carboxypeptidase II-2 [Nicotiana tomentosiformis]
JMSF052G21Sequence713006426 (6)ref|XP_006358874.1|6e-85PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein-like869004900 (6)emb|CDP09802.1|4e-79unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052G21+ TTTATTCTAACTGTAAAAGATT
                      ____________________________________________________________
consensus TTTATTCTAACTGTAAAAGATT
 
. : . : . : . : . : . :
rJMSF052G21+ TATCCCCAAATATAGGTGTCTTATGGTATTTCTTTGCTGAAGTCTTTGATTTCTTCAGAA
                      ____________________________________________________________
consensus TATCCCCAAATATAGGTGTCTTATGGTATTTCTTTGCTGAAGTCTTTGATTTCTTCAGAA
 
. : . : . : . : . : . :
rJMSF052G21+ GCTTTTTTCTTATAGTTTTTCATGTAAACATCCTCTTCATGATCCTGCCATTAGCCATGC
                      ____________________________________________________________
consensus GCTTTTTTCTTATAGTTTTTCATGTAAACATCCTCTTCATGATCCTGCCATTAGCCATGC
 
. : . : . : . : . : . :
rJMSF052G21+ GACTATACAACAGGCCCTGCTTTCTGGCTTTTGTTTACATGGCAATATGTTCAATGCTTA
                      ____________________________________________________________
consensus GACTATACAACAGGCCCTGCTTTCTGGCTTTTGTTTACATGGCAATATGTTCAATGCTTA
 
. : . : . : . : . : . :
rJMSF052G21+ AATCTTATCCTTCAGTTGGAGACTCGGCTTTATACTTGGGTTTATTGGCTTTGTTTATCA
                      ____________________________________________________________
consensus AATCTTATCCTTCAGTTGGAGACTCGGCTTTATACTTGGGTTTATTGGCTTTGTTTATCA
 
. : . : . : . : . : . :
rJMSF052G21+ ACGAATTGTCAGAAATGCCATTTTCTTTCTTCCTATTCTGTGGATATGTGGGTGTCTCCC
                      ____________________________________________________________
consensus ACGAATTGTCAGAAATGCCATTTTCTTTCTTCCTATTCTGTGGATATGTGGGTGTCTCCC
 
. : . : . : . : . : . :
rJMSF052G21+ TTTTAAGCCCAGTAATGCACAACCTATGGATATGGAGGGGTACTGGAAATGCAAACTTCT
                      ____________________________________________________________
consensus TTTTAAGCCCAGTAATGCACAACCTATGGATATGGAGGGGTACTGGAAATGCAAACTTCT
 
. : . : . : . : . : . :
JMFF038H04- GGTGAGGTAGTGGGCTTTGCTCGGA
rJMSF052G21+ ATTTTGCAACTGCTATGGGATACGCCTGCTTCCAGGGTGAGGTAGTGGGCTTTGCTCGGA
                      ____________________________________________________________
consensus ATTTTGCAACTGCTATGGGATACGCCTGCTTCCAGGGTGAGGTAGTGGGCTTTGCTCGGA
 
. : . : . : . : . : . :
JMFF038H04- ACAGGAGGACGACGCCGGAGCTCGAACTGCGCCGCCATCGGAGCCTCCAC
rJMSF052G21+ ACAGGAGGACGATGCCGGAGCTCGAATCGCACCGCCATCGGAGCCTCCACGCGCCGCCGC
                      ____________________________________________________________
consensus ACAGGAGGACGATGCCGGAGCTCGAATTGCGCCGCCATCGGAGCCTCCACGCGCCGCCGC
 
. : . : . : . : . : . :
rJMSF052G21+ CGCCGCTGCTCCGACGCCACGCGCCGGCGCGTGAGGCAGATTCCGGCGTCTTCTCCGGCT
                      ____________________________________________________________
consensus CGCCGCTGCTCCGACGCCACGCGCCGGCGCGTGAGGCAGATTCCGGCGTCTTCTCCGGCT
 
. : . : . : . : . : . :
rJMSF052G21+ GAAAATTACACCGGTGAACTCGCCTTAGTGTGTAGGTTCTGCCCATGTATGTTTTGTGGG
JMFS162E11+ TGCCCATGTATGTTTTGTGGG
                      ____________________________________________________________
consensus GAAAATTACACCGGTGAACTCGCCTTAGTGTGTAGGTTCTGCCCATGTATGTTTTGTGGG
 
. : . : . : . : . : . :
rJMSF052G21+ GTTTTGGGTTGTATTTTGCACTTAGGCGAGGCGAGCGGACTAGGCGCAAGGCCGTGACCG
JMFS162E11+ GTTNTGAGTTGTATTTTGCACTTAGGCGAGGCGAGCGAACTAGGCGCAAGGCCGTGACCG
                      ____________________________________________________________
consensus GTTTTGGGTTGTATTTTGCACTTAGGCGAGGCGAGCGGACTAGGCGCAAGGCCGTGACCG
 
. : . : . : . : . : . :
rJMSF052G21+ CCCAGACGCCTAGCCGGCGCCTAGGCGTCGCCTTGATAACCCTG
JMFS162E11+ CCCAGACGCCTAGGCGGCGCCTAGGCGACGCCTTGATAACCCTGGTTTGGATAACTATAT
JMFS168D08+ AT
                      ____________________________________________________________
consensus CCCAGACGCCTAGGCGGCGCCTAGGCGTCGCCTTGATAACCCTGGTTTGGATAACTATAT
 
. : . : . : . : . : . :
JMFS162E11+ ACCTAAATTCCAAGAGTAAGGATTCCAGTATAGGGTCTTCCCATCTTTCTCAACATGAAA
JMFS155A05+ CTAAATTCCAAGAGTAAGGATTCCAGTATAGGGTCTTCCCATCTTTCTCAACATGAAA
JMFS168D08+ ACCTAAATTCCAAGAGTAAGGATTCCAGTATAGGGTCTTCCCATCTTTCTCAACATGAAA
                      ____________________________________________________________
consensus ACCTAAATTCCAAGAGTAAGGATTCCAGTATAGGGTCTTCCCATCTTTCTCAACATGAAA
 
. : . : . : . : . : . :
JMFS162E11+ AGGTCCAAGTTCCTCAGCCAATCCATAAGCAATTGATGAACATCCAGGCCCTCCATTGAG
JMFS155A05+ AGGTCCAAGTTCCTCAGCCAATCCATAAGCAATTGATGAACATCCAGGCCCTCCATTGAG
JMFS168D08+ AGGTCCAAGTTCCTCAGCCAATCCATAAGCAATTGATGAACATCCAGGCCCTCCATTGAG
                      ____________________________________________________________
consensus AGGTCCAAGTTCCTCAGCCAATCCATAAGCAATTGATGAACATCCAGGCCCTCCATTGAG
 
. : . : . : . : . : . :
JMFS162E11+ CCAAAGAACAAGAGGCTTAGAAGAAGGGTCCACCACAGCCTCAAAGAACCAATAAAAAAG
JMFS155A05+ CCAAAGAACAAGAGGCTTAGAAGAAGGGTCCACCACAGCCTCAAAGAACCAATAAAAAAG
JMFS168D08+ CCAAAGAACAAGAGGCTTAGAAGAAGGGTCCACCACAGCCTCAAAGAACCAATAAAAAAG
                      ____________________________________________________________
consensus CCAAAGAACAAGAGGCTTAGAAGAAGGGTCCACCACAGCCTCAAAGAACCAATAAAAAAG
 
. : . : . : . : . : . :
JMFS162E11+ TGCTCTCCCAGACTCCTGGTTCACAGTCACATACCCAGAATACTGTGCAAAGCTGACATT
JMFS155A05+ TGCTCTCCCAGACTCCTGGTTCACAGTCACATACCCAGAATACTGTGCAAAGCTGACATT
JMFF002K23+ TCACAGTCACATACCCAGAATACTGTGCAAAGCTGACATT
JMFS168D08+ TGCTCTCCCAGACTCCTGGTTCACAGTCACATACCCAGAATACTGTGCAAAGCTGACATT
                      ____________________________________________________________
consensus TGCTCTCCCAGACTCCTGGTTCACAGTCACATACCCAGAATACTGTGCAAAGCTGACATT
 
. : . : . : . : . : . :
JMFS162E11+ GAAGCCAAGCCCTGGCAAATCCAAGACTGCGTCCAGTTTTTGCTGATCCACAGAAGAAGA
JMFS155A05+ GAAGCCAAGCCCTGGCAAATCCAAGACTGCGTCCAGTTTTTGCTGATCCACAGAAGAAGA
JMFF002K23+ GAAGCCAAGCCCTGGCAAATCCAAGACTGCGTCCAGTTTTTGCTGATCCACAGAAGAAGA
JMFS168D08+ GAAGCCAAGCCCTGGCAAATCCAAGACTGCGTCCAGTTTTTGCTGATCCACAGAAGAAGA
                      ____________________________________________________________
consensus GAAGCCAAGCCCTGGCAAATCCAAGACTGCGTCCAGTTTTTGCTGATCCACAGAAGAAGA
 
. : . : . : . : . : . :
JMFS162E11+ CCCTTTCCCACCATCAATACTGGTGGCGAGGAGAAGCACAAAGAGAAGACTGCAACCCCA
JMFS155A05+ CCCTTTCCCACCATCAATACTGGTGGCGAGGAGAAGCACAAAGAGAAGACTGCAACCCCA
JMFF002K23+ CCCTTTCCCACCATCAATACTGGTGGCGAGGAGAAGCACAAAGAGAAGACTGCAACCCCA
JMFS168D08+ CCCTTTCCCACCATCAATACTGGTGGCGAGGAGAAGCACAAAGAGAAGACTGCAACCCCA
                      ____________________________________________________________
consensus CCCTTTCCCACCATCAATACTGGTGGCGAGGAGAAGCACAAAGAGAAGACTGCAACCCCA
 
. : . : . : . : . : . :
JMFS162E11+ GCTCTGGGCAGACATTTCCAGTGGAATTTTGGTGAGACACAAGAATCCCCCTTTCTTGAA
JMFS155A05+ GCTCTGGGCAGACATTTCCAGTGGAATTTTGGTGAGACACAAGAATCCCCCTTTCT
JMFF002K23+ GCTCTGGGCAGACATTTCCAGTGGAATTTTGGTGAGACACAAGAATCCCCCTTTCTTGAA
JMFS168D08+ GCTCTGGGCAGACATTTCCAGTGGAATTTTGGTGAGACACAAGAATCCCCCTTTCTTGAA
                      ____________________________________________________________
consensus GCTCTGGGCAGACATTTCCAGTGGAATTTTGGTGAGACACAAGAATCCCCCTTTCTTGAA
 
. : . : . : . : . : . :
JMFS162E11+ TCGGATTGAATGAAGACTATATAATAAGATAGAGGGTTGTTCTGAGTCTTTGTTAAA
JMFF002K23+ TC
JMFS168D08+ TCGGATTGAATGAAGACTATATAATAAGATAGAGGGTTGTTCTGAGTCTTTGTTAAAGCC
                      ____________________________________________________________
consensus TCGGATTGAATGAAGACTATATAATAAGATAGAGGGTTGTTCTGAGTCTTTGTTAAAGCC