Contig 004389:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF046M16-                                                                 ATCTA
                      ____________________________________________________________
consensus                                                                    ATCTA
 
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rJMSF046M16-          CTACACTCACTCAAAAACTAATGCACACACATATACTTCCAACTGTAATAAAGTCACTTG
                      ____________________________________________________________
consensus             CTACACTCACTCAAAAACTAATGCACACACATATACTTCCAACTGTAATAAAGTCACTTG
 
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rJMSF046M16-          GCATAATGTTAAAAGGCAACAAGCTAGAATGCCATAGTTTACAAAGACAAACCCTAGAGA
                      ____________________________________________________________
consensus             GCATAATGTTAAAAGGCAACAAGCTAGAATGCCATAGTTTACAAAGACAAACCCTAGAGA
 
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JMFS049A10+                                                                    AGA
rJMSF046M16-          AAATGAATCCAAGAATGGAACATACTCCATAACTCATTGCTCACCTGTCCTGCTCGGAGA
                      ____________________________________________________________
consensus             AAATGAATCCAAGAATGGAACATACTCCATAACTCATTGCTCACCTGTCCTGCTCGGAGA
 
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JMFS049A10+           TACAGCTTGGTACACCCAACCTGGTACAATTCAGGAAGGACATTGAATTGCTTCAGAACA
rJMSF046M16-          TACAACTTGGTATACCCAACCTGGTACAATTCAGGAAGGACATTGAATTGCTTCAGAACA
                      ____________________________________________________________
consensus             TACAGCTTGGTATACCCAACCTGGTACAATTCAGGAAGGACATTGAATTGCTTCAGAACA
 
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JMFS049A10+           GCAACCACTGTACTTAAAGGATCTCGGAACACATTATTATCCAGGAGGAAACCATACTTA
rJMSF046M16-          GCAACCACTGTACTTAAAGGATCTCGGAACACATTATTATCCAGGAGGAAACCATACCTA
                      ____________________________________________________________
consensus             GCAACCACTGTACTTAAAGGATCTCGGAACACATTATTATCCAGGAGGAAACCATACTTA
 
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JMFS049A10+           TCTGCAAAATATTGATGTGTCATCTTAGTTGAATATCCAGATCTTGAAATCCTCACAGCT
rJMSF046M16-          TCTGCAAAATATTGATGTGTCATCTTAGTTGGATATCCAGATCTTGAAATCCTCACAGCT
                      ____________________________________________________________
consensus             TCTGCAAAATATTGATGTGTCATCTTAGTTGGATATCCAGATCTTGAAATCCTCACAGCT
 
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JMFS049A10+           TCAAAAACCCCACTGTATCTGAGTTGCTGTAAGAATAGTTCTTTCTCGAATACACCAGGA
rJMSF046M16-          TCAAAAACCCCACTGTATCTGAGTTGCTGTAAGACTAGTTCTTTCTCGAATACACCAGGA
                      ____________________________________________________________
consensus             TCAAAAACCCCACTGTATCTGAGTTGCTGTAAGACTAGTTCTTTCTCGAATACACCAGGA
 
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JMFS049A10+           AGCTGCTTATTGTTAGGCTTTATGCAACAAATGAAGTGTGGAGTGGTGTTATCCAACTGC
rJMSF046M16-          AGCTGCTTATTGTTAGGCTTTATGCAACAAATGAAGTGTGGAGTGGTGTTATCCAACTGC
                      ____________________________________________________________
consensus             AGCTGCTTATTGTTAGGCTTTATGCAACAAATGAAGTGTGGAGTGGTGTTATCCAACTGC
 
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JMFS049A10+           TGCATTAATTGAAATAATTGAACCTTAAACTTGGTAACAACGCTTTGCTTCTGAGGATAC
rJMSF046M16-          CGCATTAATTGAAATAATTGAACCTTAAACTTGGTAACAACGCTTTGCTTCTGAGGATAC
                      ____________________________________________________________
consensus             TGCATTAATTGAAATAATTGAACCTTAAACTTGGTAACAACGCTTTGCTTCTGAGGATAC
 
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JMFS049A10+           AATCCATCAAGCAGAATTGGACTCGATTTATGAGATTGATCAAGTAAAGAAGTGGCAAAC
rJMSF046M16-          AATCCATCAAGCAGAATTGGACTCGATTTCTGAGATTGATCAAGTAAAGAAGTGGCAAAT
                      ____________________________________________________________
consensus             AATCCATCAAGCAGAATTGGACTCGATTTCTGAGATTGATCAAGTAAAGAAGTGGCAAAT
 
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JMFS049A10+           AGCTTAGGAAGGCGGGTACTGCAT                                    
rJMSF046M16-          AGCTTAGGAAGGCGGGAACTGCATGATGAGAGTAGCTGAATAATATCAGAATGCAGTACA
                      ____________________________________________________________
consensus             AGCTTAGGAAGGCGGGTACTGCATGATGAGAGTAGCTGAATAATATCAGAATGCAGTACA
 
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rJMSF046M16-          TCTCTGTTCTTTTCCGAGAAACCATTGTTGTCATAAGAGAACCTCTCCAGCATAATGTTG
                      ____________________________________________________________
consensus             TCTCTGTTCTTTTCCGAGAAACCATTGTTGTCATAAGAGAACCTCTCCAGCATAATGTTG