Contig 004381:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034O13Sequence659004381 (6)ref|XP_011095354.1|1e-122PREDICTED: eukaryotic translation initiation factor 3 subunit I-like [Sesamum i691004381 (6)gb|KHN14569.1|316Eukaryotic translation initiation factor 3 subunit I [Glycine soja]
JMSF043J04Sequence718004381 (6)ref|XP_009777666.1|1e-137PREDICTED: eukaryotic translation initiation factor 3 subunit I-like isoform X2750004381 (6)gb|KHN14569.1|361Eukaryotic translation initiation factor 3 subunit I [Glycine soja]
JMSF044P14Sequence735004381 (6)ref|XP_009777666.1|1e-137PREDICTED: eukaryotic translation initiation factor 3 subunit I-like isoform X2658004381 (6)gb|KHN14569.1|297Eukaryotic translation initiation factor 3 subunit I [Glycine soja]

Alignment

This contig is upended


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JMSF044P14-                                                                    GGG
                      ____________________________________________________________
consensus                                                                      GGG
 
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JMSF034O13-                 AGAACTGCAGTTAGGGTTTTTCTGTTCTATCTCTCCCATCGAATCAAACTTTTT
JMSF044P14-           TGAGGTAGAACTGCAGTTAGGGTTTTTCTGTTCTATCTCTCCCATCGAATCAAACTTTTT
JMSF043J04-                             AGGGTTTTTCTGTTCTACCTCTCCCATCGAATCAAACTTTTT
                      ____________________________________________________________
consensus             TGAGGTAGAACTGCAGTTAGGGTTTTTCTGTTCTATCTCTCCCATCGAATCAAACTTTTT
 
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JMSF034O13-           GGAAATCAGAAGAATTTGCAGAGTCGAAATAAGAAGATGAGGCCGATATTGATGAAGGGG
JMSF044P14-           GGAAATCAGAAGAATTTGCAGAGTCGAAATAAGAAGATGAGGCCGATATTGATGAAGGGG
JMSF043J04-           GGAAATCAGAAGAATTTGCAGAGTCGAAATAAGAAGATGAGGCCGATATTGATGAAGGGG
                      ____________________________________________________________
consensus             GGAAATCAGAAGAATTTGCAGAGTCGAAATAAGAAGATGAGGCCGATATTGATGAAGGGG
 
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JMSF034O13-           CACGAGAGGCCGCTCACTTTCCTCAAGTACAACCGGGAAGGAGATCTGCTCTTCTCCTGC
JMSF044P14-           CACGAGAGGCCGCTCACTTTCCTCAAGTACAACCGGGAAGGAGATCTGCTCTTCTCCTGC
JMSF043J04-           CACGAGAGGCCGCTCACTTTCCTCAAGTACAACCGGGAAGGAGATCTGCTCTTCTCCTGC
                      ____________________________________________________________
consensus             CACGAGAGGCCGCTCACTTTCCTCAAGTACAACCGGGAAGGAGATCTGCTCTTCTCCTGC
 
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JMSF034O13-           GCCAAGGACCACAACCCCACCGTCTGGTTCGCCGACAACGGCGAACGCCTCGGAACTTAC
JMSF044P14-           GCCAAGGACCACAACCCCACCGTCTGGTTCGCCGACAACGGCGAACGCCTCGGAACTTAC
JMSF043J04-           GCCAAGGACCACAACCCCACCGTCTGGTTCGCCGACAACGGCGAACGCCTCGGAACTTAC
                      ____________________________________________________________
consensus             GCCAAGGACCACAACCCCACCGTCTGGTTCGCCGACAACGGCGAACGCCTCGGAACTTAC
 
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JMSF034O13-           CGCGGCCATAACGGCGCCGTTTGGTGCTGCGACATCTCTCGGGATTCAAGTAGGTTAATT
JMSF044P14-           CGCGGCCATAACGGCGCCGTTTGGTGCTGCGACATCTCTCGGGATTCAAGTAGGTTAATT
JMSF043J04-           CGCGGCCATAACGGCGCCGTTTGGTGCTGCGACATCTCTCGGGATTCAAGTAGGTTAATT
                      ____________________________________________________________
consensus             CGCGGCCATAACGGCGCCGTTTGGTGCTGCGACATCTCTCGGGATTCAAGTAGGTTAATT
 
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JMSF034O13-           ACTGGGAGTGCGGACCAGACGGTTAAGCTCTGGGATGTTAAGACGGGCACTCAACTGTTT
JMSF044P14-           ACTGGGAGTGCGGACCAGACGGTTAAGCTCTGGGATGTTAAGACGGGCACTCAACTGTTT
JMSF043J04-           ACTGGGAGTGCGGACCAGACGGTTAAGCTCTGGGATGTTAAGACGGGCACTCAACTGTTT
                      ____________________________________________________________
consensus             ACTGGGAGTGCGGACCAGACGGTTAAGCTCTGGGATGTTAAGACGGGCACTCAACTGTTT
 
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JMSF034O13-           ACTTTCAACTTTGACTCACCTGGAAGGTCTGTGGACTTTGCTGTTGGGGATAAGCTTGCA
JMSF044P14-           ACTTTCAACTTTGACTCACCTGGAAGGTCTGTGGACTTTGCTGTTGGGGATAAGCTTGCA
JMSF043J04-           ACTTTCAACTTTGACTCACCTGGAAGGTCTGTGGACTTTGCTGTTGGGGATAAGCTTGCA
                      ____________________________________________________________
consensus             ACTTTCAACTTTGACTCACCTGGAAGGTCTGTGGACTTTGCTGTTGGGGATAAGCTTGCA
 
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JMSF034O13-           GTCATGACCACTGATCCATTCATGGGGCTGCCTTCTGCTATCCATGTAAAGAGAATTGCT
JMSF044P14-           GTCATGACCACTGATCCATTCATGGGGCTGCCTTCTGCTATCCATGTAAAGAGAATTGCT
JMSF043J04-           GTCATGACCACTGATCCATTCATGGGGCTGCCTTCTGCTATCCATGTAAAGAGAATTGCT
                      ____________________________________________________________
consensus             GTCATGACCACTGATCCATTCATGGGGCTGCCTTCTGCTATCCATGTAAAGAGAATTGCT
 
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JMSF034O13-           AGCGACCCTGAAGACCAAACGGGTGAATCTGTGCTTACCATGAAGGGCCACCAGGGAAGG
JMSF044P14-           AGCGACCCTGAAGACCAAACGGGTGAATCTGTGCTTACCATGAAGGGCCACCAGGGAAGG
JMSF043J04-           AGCGACCCTGAAGACCAAACGGGTGAATCTGTGCTTACCATGAAGGGCCACCAGGGAAGG
rJMSF043J04+                        CCAAACGGGTGAATCTGTGCTTACCATGAAGGGCCACCAGGGAAGG
                      ____________________________________________________________
consensus             AGCGACCCTGAAGACCAAACGGGTGAATCTGTGCTTACCATGAAGGGCCACCAGGGAAGG
 
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JMSF034O13-           ATCAATAGAGCTGTTTGGGGACCTTTGAATAAGACAATTATAAGTGGTGGTGAAGATTCT
JMSF044P14-           ATCAATAGAGCTGTTTGGGGACCTTTGAATAAGACAATTATAAGTGGTGGTGAAGATTCT
JMSF043J04-           ATCAATAGAGCTGTTTGGGGACCTTTGAATAAGACAATTATAAGTGGTGGTGAAGATTCT
rJMSF043J04+          ATCAATAGAGCTGTTTGGGGACCTTTGAATAAGACAATTATAAGTGGTGGTGAAGATTCT
rJMSF034O13+                                      ATAAGACAATTATAAGTGGTGGTGAAGATTCT
                      ____________________________________________________________
consensus             ATCAATAGAGCTGTTTGGGGACCTTTGAATAAGACAATTATAAGTGGTGGTGAAGATTCT
 
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JMSF034O13-           GTTCTTCGCATCTGGGATGCTGAGACTGGAAAACTACTTAAGGAGTCTGACCAGGAATCT
JMSF044P14-           GTTCTTCGCATCTGGGATGCTGAGACTGGAAAACTACTTAAGGAGTCTGACCAGGAATCT
JMSF043J04-           GTTCTTCGCATCTGGGATGCTGAGACTGGAAAACTACTTAAGGAGTCTGACCAGGAATCT
rJMSF043J04+          GTTCTTCGCATCTGGGATGCTGAGACTGGAAAACTACTTAAGGAGTCTGACCAGGAATCT
rJMSF034O13+          GTTCTTCGCATCTGGGATGCTGAGACTGGAAAACTACTTAAGGAGTCTGACCAGGAATCT
rJMSF044P14+            TCTTCGCATCTGGGATGCTGAGACTGGAAAACTACTTAAGGAGTCTGACCAGGAATCT
                      ____________________________________________________________
consensus             GTTCTTCGCATCTGGGATGCTGAGACTGGAAAACTACTTAAGGAGTCTGACCAGGAATCT
 
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JMSF034O13-           GGTC                                                        
JMSF044P14-           GGTCACAAGAAGGGGATTACTTCTCTGGCAAAATCAATAGATGGATCACATTTTATAACA
JMSF043J04-           GGTCACAAGAAGGGGATTACTTCTCTGGCAAAATCAATAGATGGATCACATTTTATAACA
rJMSF043J04+          GGTCACAAGAAGGGGATTACTTCTCTGGCAAAATCAATAGATGGATCACATTTTATAACA
rJMSF034O13+          GGTCACAAGAAGGGGATTACTTCTCTGGCAAAATCAATAGATGGATCACATTTTATAACA
rJMSF044P14+          GGTCACAAGAAGGGGATTACTTCTCTGGCAAAATCAATAGATGGATCACATTTTATAACA
                      ____________________________________________________________
consensus             GGTCACAAGAAGGGGATTACTTCTCTGGCAAAATCAATAGATGGATCACATTTTATAACA
 
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JMSF044P14-           GGTTCTTTGGAT                                                
JMSF043J04-           GGTTCTTTGGATAA                                              
rJMSF043J04+          GGTTCTTTGGATAAATCAGCAAAGCTCTGGGATATCAGAACCTTGACACTTCTTAAGACC
rJMSF034O13+          GGTTCTTTGGATAAATCAGCAAAGCTCTGGGATATCAGAACCTTGACACTTCTTAAGACC
rJMSF044P14+          GGTTCTTTGGATAAATCAGCAAAGCTCTGGGATATCAGAACCTTGACACTTCTTAAGACC
                      ____________________________________________________________
consensus             GGTTCTTTGGATAAATCAGCAAAGCTCTGGGATATCAGAACCTTGACACTTCTTAAGACC
 
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rJMSF043J04+          TATGTGACTGAGCGCCCAGTGAATGCAGTTACAATGTCACCACTGCTGGATCATATTGTG
rJMSF034O13+          TATGTGACTGAGCGCCCAGTGAATGCAGTTACAATGTCACCACTGCTGGATCATATTGTG
rJMSF044P14+          TATGTGACTGAGCGCCCAGTGAATGCAGTTACAATGTCACCACTGCTGGATCATATTGTG
                      ____________________________________________________________
consensus             TATGTGACTGAGCGCCCAGTGAATGCAGTTACAATGTCACCACTGCTGGATCATATTGTG
 
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rJMSF043J04+          CTTGGAGGTGGTCAAGATGCATCTGCTGTAACAACCACTGACCATCGTGCTGGGAAGTTT
rJMSF034O13+          CTTGGAGGTGGTCAAGATGCATCTGCTGTAACAACCACTGACCATCGTGCTGGGAAGTTT
rJMSF044P14+          CTTGGAGGTGGTCAAGATGCATCTGCTGTAACAACCATTGACCATCGTGCTGGGAAGTTT
                      ____________________________________________________________
consensus             CTTGGAGGTGGTCAAGATGCATCTGCTGTAACAACCACTGACCATCGTGCTGGGAAGTTT
 
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rJMSF043J04+          GAGGCTAAATTCTATGATAAGATTCTTCAAGAAGAAATCGGTGGCGTCAAAGGGCACTTT
rJMSF034O13+          GAGGCTAAATTCTATGATAAGATTCTTCAAGAAGAAATCGGTGGCGTCAAAGGGCACTTT
rJMSF044P14+          GAGGCTAAATTCTATGATAAGATTCTTCAAGAAGAAATCGGTGGCGTCAAAGGGCACTTT
                      ____________________________________________________________
consensus             GAGGCTAAATTCTATGATAAGATTCTTCAAGAAGAAATCGGTGGCGTCAAAGGGCACTTT
 
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rJMSF043J04+          GGACCAATTAATGCTTTGGCTTTCAACCCTGACGGGAAAAGTTTTGCGAGTGGTGGTGAA
rJMSF034O13+          GGACCAATTAATGCTTTGGCTTTCAACCCTGACGGGAAAAGTTTTGCGAGTGGTGGTGAA
rJMSF044P14+          GGACCAATTAATGCTTTGGCTTTCAACCCTGACGGGAAAAGTTTTGCGAGTGGTGGTGAA
                      ____________________________________________________________
consensus             GGACCAATTAATGCTTTGGCTTTCAACCCTGACGGGAAAAGTTTTGCGAGTGGTGGTGAA
 
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rJMSF043J04+          GATGGGTATGTGAGATTACATCATTTCGACGCTGATTACTTCCATATCAAGATTTAAGGT
rJMSF034O13+          GATGGGTATGTGAGATTACATCATTTCGACGCTGATTACTTCCATATCAAGATTTAAGGT
rJMSF044P14+          GATGGGTATGTGAGATTACATCATTTCGACGCTGATTACTTCCATATCAAGATTTAAGGT
                      ____________________________________________________________
consensus             GATGGGTATGTGAGATTACATCATTTCGACGCTGATTACTTCCATATCAAGATTTAAGGT
 
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rJMSF043J04+          TAAAGTGCAGCAGCTTCTCAAATTGAAAGACAATCACAATCTCCCCCGCTTTCGTTCTTC
rJMSF034O13+          TAAAGTGCAGCAGCTTCTCAAATTGAAAGACAATCACAATCTCCCCCGCTTTCGTTCTTC
rJMSF044P14+          TAAAGTGCAGCAGCTTCTCAAATTGAAAGACAATCACAATCTCCCCCGCTTTCGTTCTTC
                      ____________________________________________________________
consensus             TAAAGTGCAGCAGCTTCTCAAATTGAAAGACAATCACAATCTCCCCCGCTTTCGTTCTTC
 
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rJMSF043J04+          CTGGTTGAGCAAAATTTTTGTAGAGGATAGCTTGTTAAGGCTTGAAAAACTTCAGAAAGC
rJMSF034O13+          CTGGTTGAGCAAAATTTTTGTAGAGGATAGCTTGTTAAGGCTTGAAAAACTTCAGAAAGC
rJMSF044P14+          CTGGTTGAGCAAAATTTTTGTAGAGGATAGCTTGTTAAGGCTTGAAAAACTTCAGAAAGC
                      ____________________________________________________________
consensus             CTGGTTGAGCAAAATTTTTGTAGAGGATAGCTTGTTAAGGCTTGAAAAACTTCAGAAAGC
 
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rJMSF043J04+          AAATAGTGTGTTTAGTGTTGCTTCTGTTTAATGT                          
rJMSF034O13+          AAATAGTGTGTTTAGTGTTGCTTCTGTTTAATGTTAAATGGATTCTTTACTTAAATTTA 
rJMSF044P14+          AAATAGTGTGTTTAGTGTTGCTTCTGTTTAATGTTAAATGGATTCTTTACTTAAATTTAT
                      ____________________________________________________________
consensus             AAATAGTGTGTTTAGTGTTGCTTCTGTTTAATGTTAAATGGATTCTTTACTTAAATTTAT