Contig 004303:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008P08Sequence534002075 (8)gb|ACF17669.1|5e-39putative pyruvate dehydrogenase E1 alpha subunit [Capsicum annuum]756004303 (4)gb|ACF17669.1|1e-71putative pyruvate dehydrogenase E1 alpha subunit [Capsicum annuum]
JMFF011M04Sequence599002075 (8)gb|ACF17669.1|3e-54putative pyruvate dehydrogenase E1 alpha subunit [Capsicum annuum]708004303 (4)ref|XP_009793937.1|3e-55PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-l
JMFF047I24Sequence424002075 (8)gb|ACF17669.1|7e-15putative pyruvate dehydrogenase E1 alpha subunit [Capsicum annuum]388004303 (4)ref|XP_011101308.1|1e-32PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic [
JMSF032F06Sequence693002075 (8)gb|ACF17669.1|6e-78putative pyruvate dehydrogenase E1 alpha subunit [Capsicum annuum]762004303 (4)gb|KJB49643.1|1e-44hypothetical protein B456_008G131200 [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF008P08+ AAAAAGGGTCCTGCTTTTGGTATGCCTGGTGTACATGTTGATGGAATGGATGT
                      ____________________________________________________________
consensus AAAAAGGGTCCTGCTTTTGGTATGCCTGGTGTACATGTTGATGGAATGGATGT
 
. : . : . : . : . : . :
rJMFF008P08+ CTTGAAGGTTCGGGAAGTAGCTCAGGAGGCTATTGGCAGAGCTAGGAGAGGGGAAGGCCC
rJMFF011M04+ GGAAGTAGCTCAGGAGGCTATTGGCAGAGCTAGGAGAGGGGAAGGCCC
                      ____________________________________________________________
consensus CTTGAAGGTTCGGGAAGTAGCTCAGGAGGCTATTGGCAGAGCTAGGAGAGGGGAAGGCCC
 
. : . : . : . : . : . :
rJMFF008P08+ GACTTTGGTTGAATGCGAGACTTACAGGTTCCAGAGGACACTCTTTGGCCGATCCAGATG
rJMFF011M04+ GACTTTGGTTGAATGCGAGACTTACAGGTTCCAGAGGACACTCTTTGGCCGATCCAGATG
                      ____________________________________________________________
consensus GACTTTGGTTGAATGCGAGACTTACAGGTTCCAGAGGACACTCTTTGGCCGATCCAGATG
 
. : . : . : . : . : . :
rJMFF008P08+ AGCTTCGTGACCCTTCTGAGAAGAGTCACTATGCAGCTCGTGATCCCATCGCTGCATTGA
rJMFF011M04+ AGCTTCGTGACCCTTCTGAGAAGAGTCACTATGCAGCTCGTGATCCCATCGCTGCATTGA
rJMSF032F06+ AGAAGAGTCACTATGCAGCTCGTGATCCCATCGCTGCATTGA
                      ____________________________________________________________
consensus AGCTTCGTGACCCTTCTGAGAAGAGTCACTATGCAGCTCGTGATCCCATCGCTGCATTGA
 
. : . : . : . : . : . :
rJMFF008P08+ AAAAGTACTTATTTGATAACAAGCTTGCAACTGAAGAGGAATTGAAGGCTATTGAGAAAA
rJMFF011M04+ AAAAGTACTTATTTGATAACAAGCTTGCAACTGAAGAGGAATTGAAGGCTATTGAGAAAA
rJMFF047I24+ GCTTGCAACTGAAGAGGAATGAAGGGCTATTGAGAAAA
rJMSF032F06+ AAAAGTACTTATTTGATANCAAGCTTGCAACTGAAGAGGAATTGAAGGCTATTGAGAAAA
                      ____________________________________________________________
consensus AAAAGTACTTATTTGATAACAAGCTTGCAACTGAAGAGGAATTGAAGGCTATTGAGAAAA
 
. : . : . : . : . : . :
rJMFF008P08+ AAATTGACGAGATAGTTGAAGAGTCTGTTGAGTTTGCTGATGAAAGCCCTGTTCCTGCTC
rJMFF011M04+ AAATTGACGAGATAGTTGAAGAGTCTGTTGAGTTTGCTGATGAAAGCCCTGTTCCTGCTC
rJMFF047I24+ AAATTGACGAGATAGTTGAAGAGTCTGTTGAGTTTGCTGATGAAAGCCCTGTTCCTGCTC
rJMSF032F06+ AAATTGACGAGATAGTTGAAGAGTCTGTTGAGTTTGCTGATGAAAGCCCTGTTCCTGCTC
                      ____________________________________________________________
consensus AAATTGACGAGATAGTTGAAGAGTCTGTTGAGTTTGCTGATGAAAGCCCTGTTCCTGCTC
 
. : . : . : . : . : . :
rJMFF008P08+ GAACTCAGCTTCTAGAAAACGTATTTGCTGATCCAAGGGGCTTTGGAATTGGACCTGATG
rJMFF011M04+ GAACTCAGCTTCTAGAAAACGTATTTGCTGATCCAAGGGGCTTTGGAATTGGACCTGATG
rJMFF047I24+ GAACTCAGCTTCTAGAAAACGTATTTGCTGATCCAAGGGGCTTTGGAATTGGACCTGATG
rJMSF032F06+ GAACTCAGCTTCTAGAAAACGTATTTGCTGATCCAAGGGGCTTTGGAATTGGACCTGATG
                      ____________________________________________________________
consensus GAACTCAGCTTCTAGAAAACGTATTTGCTGATCCAAGGGGCTTTGGAATTGGACCTGATG
 
. : . : . : . : . : . :
rJMFF008P08+ GGAGGTACCGATGTGAGGATCCTAAGTTCACCGAGGGCACTGCACAAGTTTAACTCTCGC
rJMFF011M04+ GGAGGTACCGATGTGAGGATCCTAAGTTCACCGA-GGCACTGCACAAGTTTAACTCTCGC
rJMFF047I24+ GGAGGTACCGATGTGAGGATCCTAAGTTCACCGAGGGCACTGCACAAGTTTAACTCTCGC
rJMSF032F06+ GGAGGTACCGATGTGAGGATCCTAAGTTCACCGAGGGCACTGCACAAGTTTAACTCTCGC
                      ____________________________________________________________
consensus GGAGGTACCGATGTGAGGATCCTAAGTTCACCGAGGGCACTGCACAAGTTTAACTCTCGC
 
. : . : . : . : . : . :
rJMFF008P08+ TGCTTGCTGCTTCTCTCTTAATCTAGATAACATTGCCTTGGGTATTTATATCTAGTTGCT
rJMFF011M04+ TGCTTGCTGCTTCTCTCTTAATCTAGATAACATTGCCTTGGGTATTTATATCTAGTTGCT
rJMFF047I24+ TGCTTGCTGCTTCTCTCTTAATCTAGATAACATTGCCTTGGGTATTTATATCTAGTTGCT
rJMSF032F06+ TGCTTGCTGCTTCTCTCTTAATCTAGATAACATTGCCTTGGGTATTTATATCTAGTTGCT
                      ____________________________________________________________
consensus TGCTTGCTGCTTCTCTCTTAATCTAGATAACATTGCCTTGGGTATTTATATCTAGTTGCT
 
. : . : . : . : . : . :
rJMFF008P08+ GATAATAGAGAGCTTCATATGCATTATTCAGTTTATATCAGAAGAATTTATTATCTTATG
rJMFF011M04+ GATAATAGAGAGCTTCATATGCATTATTCAGTTTATATCAGAAGAATTTATTATCTTATG
rJMFF047I24+ GATAATAGAGAGCTTCATATGCATTATTCAGTTTATATCAGAAGAATTTATTATCTTATG
rJMSF032F06+ GATAATAGAGAGCTTCATATGCATTATTCAGTTTATATCAGAAGAATTTATTATCTTATG
                      ____________________________________________________________
consensus GATAATAGAGAGCTTCATATGCATTATTCAGTTTATATCAGAAGAATTTATTATCTTATG
 
. : . : . : . : . : . :
rJMFF008P08+ TATTGTGAGTTATTATTATTATTATTTTTGCTTGTGCACATTTTGTTTACAGATTTTGTT
rJMFF011M04+ TATTGTGAGTTATTATTATTATTATTTTTGCTTGTGCACATTTTGTTTACAGATTTTGTT
rJMFF047I24+ TATTGTGAGTTATTATTATTATTATTTTTGCTTGTGCAC
rJMSF032F06+ TATTGTGAGTTATTATTATTATTATTTTTGCTTGTGCACATTTTGTTTACAGATTTTGTT
                      ____________________________________________________________
consensus TATTGTGAGTTATTATTATTATTATTTTTGCTTGTGCACATTTTGTTTACAGATTTTGTT
 
. : . : . : . : . : . :
rJMFF008P08+ GTTCTTTCCTCCTGCTGTTGCTGCTGCTGCATTATTTGGATGAATGGGTAATCCTGAAGG
rJMFF011M04+ GTTCTTTCCTCCTGCTGTTGCTGCTGCTGCATTATTTGGATGAATGGGTAATCCTGAAGG
rJMSF032F06+ GTTCTTTCCTCCTGCTGTTGCTGCTGCTGCATTATTTGGATGAATGGGTAATCCTGAAGG
                      ____________________________________________________________
consensus GTTCTTTCCTCCTGCTGTTGCTGCTGCTGCATTATTTGGATGAATGGGTAATCCTGAAGG
 
. : . : . : . : . : . :
rJMFF008P08+ GGTTTGCTTTTCCTGTATTTGTTAGTTGAGGCAATAT
rJMFF011M04+ GGTTTGCTTTTCCTGTATTTGTTAGTTGAGGCAATATTAAAAGATTGTTGAAGGTTAAAT
rJMSF032F06+ GGTTTGCTTTTCCTGTATTTGTTAGTTGAGGCAATATTAAAAGATTGTTGAAGGTTAAAT
                      ____________________________________________________________
consensus GGTTTGCTTTTCCTGTATTTGTTAGTTGAGGCAATATTAAAAGATTGTTGAAGGTTAAAT
 
. : . : . : . : . : . :
rJMSF032F06+ TGAGTATGAGGTCAGGTGAACTATATTTTGGTTTTGGTTTTGGTTTTGGTTTTGGTTTTG
                      ____________________________________________________________
consensus TGAGTATGAGGTCAGGTGAACTATATTTTGGTTTTGGTTTTGGTTTTGGTTTTGGTTTTG
 
. : . : . : . : . : . :
rJMSF032F06+ GTTAATTGGTGTTGTTGAGAAGCAGGCACAAATTGACCAAAGGTGCTAATTCTTCAAAAC
                      ____________________________________________________________
consensus GTTAATTGGTGTTGTTGAGAAGCAGGCACAAATTGACCAAAGGTGCTAATTCTTCAAAAC
 
. : . : . : . : . : . :
rJMSF032F06+ TCAAAACTACTACAGTATTATGTACAAGACCAATCAAGTGTGCTTCACCAAAATGGCTTG
                      ____________________________________________________________
consensus TCAAAACTACTACAGTATTATGTACAAGACCAATCAAGTGTGCTTCACCAAAATGGCTTG