Contig 004080:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011A01Sequence475005973 (7)ref|XP_007205270.1|6e-58hypothetical protein PRUPE_ppa006473mg [Prunus persica] ref|XP_007205271.1| hypo770004080 (7)emb|CDP15204.1|4e-113unnamed protein product [Coffea canephora]
JMFF017P10Sequence229004080 (7)gb|KDO66110.1|6e-44hypothetical protein CISIN_1g0141743mg, partial [Citrus sinensis]
JMFF024N14Sequence496005973 (7)ref|XP_007205270.1|2e-59hypothetical protein PRUPE_ppa006473mg [Prunus persica] ref|XP_007205271.1| hypo743004080 (7)emb|CDP15204.1|6e-105unnamed protein product [Coffea canephora]
JMFF027E11Sequence573005973 (7)gb|KDO45354.1|3e-89hypothetical protein CISIN_1g015298mg [Citrus sinensis]716004080 (7)emb|CDP15204.1|1e-99unnamed protein product [Coffea canephora]
JMFF030B08Sequence346005973 (7)gb|KDO45355.1|4e-23hypothetical protein CISIN_1g015298mg [Citrus sinensis]684004080 (7)emb|CDP15204.1|1e-97unnamed protein product [Coffea canephora]
JMFF038C23Sequence616005973 (7)gb|KDO45354.1|6e-96hypothetical protein CISIN_1g015298mg [Citrus sinensis]697004080 (7)gb|AAW80932.1|4e-87putative protein kinase, partial [Astragalus membranaceus]
JMSF044E20Sequence785021168ref|XP_009629200.1|4e-119PREDICTED: shaggy-related protein kinase NtK-1-like [Nicotiana tomentosiformis]767004080 (7)emb|CDP15204.1|1e-116unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF044E20+ CTCTAGGTATTATAGAGCTC
rJMFF011A01+ TATAGAGCTC
                      ____________________________________________________________
consensus CTCTAGGTATTATAGAGCTC
 
. : . : . : . : . : . :
rJMSF044E20+ CAGAGCTTATTTTTGGAGCGACAGAGTACACTACCGCCATTGATGTCTGGTCTGCAGGTT
rJMFF024N14+ ACAGAGTACACTACCGCCATTGATGTCTGGTCTGCAGGTT
rJMFF011A01+ CAGAGCTTATTTTTGGAGCGACAGAGTACACTACCGCCATTGATGTCTGGTCTGCAGGTT
rJMFF030B08+ TCTGCAGGTT
rJMFF027E11+ GTCTGGTCTGCAGGTT
                      ____________________________________________________________
consensus CAGAGCTTATTTTTGGAGCGACAGAGTACACTACCGCCATTGATGTCTGGTCTGCAGGTT
 
. : . : . : . : . : . :
rJMSF044E20+ GTGTCCTTGCTGAACTGCTTCTAGGACAGACACTATTTCCTGGTGAAAGTGGAGTTGACC
rJMFF017P10+ GGACAGACANTATTTCNTGGTGAAAGTGGAGTTGACC
rJMFF024N14+ GTGTCCTTGCTGAACTGCTTCTAGGACAGACACTATTTCNTGGTGAAAGTGGAGTTGACC
rJMFF011A01+ GTGTCCTTGCTGAACTGCTTCTAGGACAGACACTATTTCCTGGTGAAAGTGGAGTTGACC
rJMFF030B08+ GTGTCCTTGCTGAACTGCTTTTAGGACAGACACTATTTCCTGGTGAAAGTGGAGTTGACC
rJMFF027E11+ GTGTCCTTGCTGAACTGCTTTTAGGACAGACACTATTTCCTGGTGAAAGTGGAGTTGACC
rJMFF038C23+ CTAGGACAGACACTATTTCNTGGTGAAAGTGGAGTTGACC
                      ____________________________________________________________
consensus GTGTCCTTGCTGAACTGCTTCTAGGACAGACACTATTTCCTGGTGAAAGTGGAGTTGACC
 
. : . : . : . : . : . :
rJMSF044E20+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
rJMFF017P10+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCNTACCAGGGAAGAAATTAAATGCATGA
rJMFF024N14+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
rJMFF011A01+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
rJMFF030B08+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
rJMFF027E11+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
rJMFF038C23+ AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
                      ____________________________________________________________
consensus AGCTTGTAGAGATCATTAAGGTCTTGGGTACTCCTACCAGGGAAGAAATTAAATGCATGA
 
. : . : . : . : . : . :
rJMSF044E20+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF017P10+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF024N14+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF011A01+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF030B08+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF027E11+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
rJMFF038C23+ ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
                      ____________________________________________________________
consensus ATCCAAACTATACAGAGTTCAAATTCCCGCAAATTAAAGCTCATCCATGGCACAAGATAT
 
. : . : . : . : . : . :
rJMSF044E20+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
rJMFF017P10+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTGTAGGCTTCTGCAGTACTCTC
rJMFF024N14+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
rJMFF011A01+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
rJMFF030B08+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
rJMFF027E11+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
rJMFF038C23+ TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
                      ____________________________________________________________
consensus TTCATAAGCGTATGCCACCAGAAGCAGTTGACCTGGTTTCTAGGCTTCTGCAGTACTCTC
 
. : . : . : . : . : . :
rJMSF044E20+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
rJMFF017P10+ CAAATTTACG
rJMFF024N14+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
rJMFF011A01+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
rJMFF030B08+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
rJMFF027E11+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
rJMFF038C23+ CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
                      ____________________________________________________________
consensus CAAATTTACGCTGCTCTGCTTTGGATGCCTTGACCCATCCTTTCTTCGATGAGCTACGTG
 
. : . : . : . : . : . :
rJMSF044E20+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
rJMFF024N14+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
rJMFF011A01+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
rJMFF030B08+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
rJMFF027E11+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
rJMFF038C23+ ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
                      ____________________________________________________________
consensus ACCCCAGCATTCGCCTCCCAAATGGACGCTTTGTTCCACCGCTGTTCAACTTTAAGCCAC
 
. : . : . : . : . : . :
rJMSF044E20+ ACGAGTTGAAGGGTGTGCCAACGGAAACCATAATGAAATTGGTTCCTGAGCACGCGAGAA
rJMFF024N14+ ACGAGTTGAAGGGTGTGCCAACGGAAACCATAATGAAATTGGTTCCTGAGCACGCGAGAA
rJMFF011A01+ ACGAGTTGAAGGGTGTGCCAACGGAAACCA---TGAAATTGGTTCCTGAGCACGCGAGAA
rJMFF030B08+ ACGAGTTGAAGGGTGTGCCAACGGAAACCATAATGAAATTGGTTCCTGAGCACGCGAGAA
rJMFF027E11+ ACGAGTTGAAGGGTGTGCCAACGGAAACCATAATGAAATTGGTTCCTGAGCACGCGAGAA
rJMFF038C23+ ACGAGTTGAAGGGTGTGCCAACGGAAACCA---TGAAATTGGTTCCTGAGCACGCGAGAA
                      ____________________________________________________________
consensus ACGAGTTGAAGGGTGTGCCAACGGAAACCATAATGAAATTGGTTCCTGAGCACGCGAGAA
 
. : . : . : . : . : . :
rJMSF044E20+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGC---ACAGATAAATGATGAATCA
rJMFF024N14+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
rJMFF011A01+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
rJMFF030B08+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
rJMFF027E11+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
rJMFF038C23+ AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
                      ____________________________________________________________
consensus AACAATGCCCCTTCCTGGGATTGTGATTCCTGAAGAGCACGACAGATAAATGATGAATCA
 
. : . : . : . : . : . :
rJMSF044E20+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
rJMFF024N14+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
rJMFF011A01+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
rJMFF030B08+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
rJMFF027E11+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
rJMFF038C23+ AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
                      ____________________________________________________________
consensus AGCGTTCCTTTCGAAGCTCTTTTTCTCCTGTCTGTAACCATTATTTTCGTATGTATCTTT
 
. : . : . : . : . : . :
rJMSF044E20+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
rJMFF024N14+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
rJMFF011A01+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
rJMFF030B08+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
rJMFF027E11+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
rJMFF038C23+ GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
                      ____________________________________________________________
consensus GTATTGCCTTGTCTCGAAAAAGCGCAGATGTAAGGAAATGCGTTCAACAATCGCCTCGGC
 
. : . : . : . : . : . :
rJMSF044E20+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
rJMFF024N14+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
rJMFF011A01+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
rJMFF030B08+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
rJMFF027E11+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
rJMFF038C23+ TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
                      ____________________________________________________________
consensus TTCAACTTGTGGTGTACCATGTATCCTGTCTTTGTATGACCTGTAGTTGTAACATCATGT
 
. : . : . : . : . : . :
rJMSF044E20+ GGTTTAAGGAATTTGAATGTACTGT
rJMFF024N14+ GGTTTAAGGAATTTGAATGTACTGTTGAGATTGAA
rJMFF011A01+ GGTTTAAGGAATTTGAATGTACTATTGAGATTGAATGTCA
rJMFF030B08+ GGTTTAAGGAATT
rJMFF027E11+ GGTTTAAGGAATTTGAATGTACTGTTGAGATTGAATGTCA
rJMFF038C23+ GGTTTAAGGAATTTGAATGTACTATTGAGATTGAATGTCAAATGGTGGAATTNNAAACAA
                      ____________________________________________________________
consensus GGTTTAAGGAATTTGAATGTACTGTTGAGATTGAATGTCAAATGGTGGAATTNNAAACAA