Contig 003296:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003K24Sequence338003296 (4)631011204 (3)gb|KDO87040.1|8e-29hypothetical protein CISIN_1g004536mg [Citrus sinensis]
JMFF034I08Sequence516003296 (4)ref|XP_009788474.1|56.2PREDICTED: uncharacterized protein LOC104236281 [Nicotiana sylvestris]716011204 (3)ref|XP_002515304.1|9e-41triacylglycerol lipase, putative [Ricinus communis] gb|EEF47288.1| triacylglycer
JMFF047P04Sequence570003296 (4)ref|XP_009788474.1|56.2PREDICTED: uncharacterized protein LOC104236281 [Nicotiana sylvestris]566011204 (3)gb|KDO87040.1|1e-13hypothetical protein CISIN_1g004536mg [Citrus sinensis]
JMFF050L08Sequence623003296 (4)ref|XP_009788474.1|56.2PREDICTED: uncharacterized protein LOC104236281 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF047P04+                                               CGGCACATACATCGGACTCTTCAC
JMFF050L08+                                                GGCACATACATCGGACTCTTCAC
                      ____________________________________________________________
consensus                                                 CGGCACATACATCGGACTCTTCAC
 
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JMFF034I08+                                         CAGCCTCGGAGTTCCCAAGTCCACAGCTTT
JMFF047P04+           CGGCATCACTAATTCGGCCTTCAATTTTCGCAGCCTCGGAGTTCCCAAGTCCACAGCTTT
JMFF050L08+           CGGCATCACTAATTCGGCCTTCAATTTTCGCAGCCTCGGAGTTCCCAAGTCCACAGCTTT
                      ____________________________________________________________
consensus             CGGCATCACTAATTCGGCCTTCAATTTTCGCAGCCTCGGAGTTCCCAAGTCCACAGCTTT
 
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JMFF034I08+           TATGGCCTCCATTGCGCAGAGATCGCACGCGGAGTATCTTCATAACCCAACTATCTTTCT
JMFF047P04+           TATGGCCTCCATTGCGCAGAGATCGCACGCGGAGTATCTTCATAACCCAACTATCTTTCT
JMFF050L08+           TATGGCCTCCATTGCGCAGAGATCGCACGCGGAGTATCTTCATAACCCAACTATCTTTCT
                      ____________________________________________________________
consensus             TATGGCCTCCATTGCGCAGAGATCGCACGCGGAGTATCTTCATAACCCAACTATCTTTCT
 
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JMFF034I08+           GTTCCGCCGCCCTCCGTTTCACGTTTTCGTCGATCAAAACGACGTCGTCGCCGGCCATGA
JMFF047P04+           GTTCCGCCGCCCTCCGTTTCACGTTTTCGTCGATCAAAACGACGTCGTCGCCGGCCATGA
JMFF050L08+           GTTCCGCCGCCCTCCGTTTCACGTTTTCGTCGATCAAAACGACGTCGTCGCCGGCCATGA
                      ____________________________________________________________
consensus             GTTCCGCCGCCCTCCGTTTCACGTTTTCGTCGATCAAAACGACGTCGTCGCCGGCCATGA
 
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JMFF034I08+           CAACGCACCGCCTTCTACCACCGGGCCACCGATATGTACGGAAAGACAACCGCCGAGGGG
JMFF003K24+                                       CCGATATGTACGGAAAGACANCCGCCGAGGGG
JMFF047P04+           CAACGCACCGCCTTCTACCACCGGGCCACCGATATGTACGGAAAGACAACCGCCGAGGGG
JMFF050L08+           CAACGCACCGCCTTCTACCACCGGGCCACCGATATGTACGGAAAGACAACCGCCGAGGGG
                      ____________________________________________________________
consensus             CAACGCACCGCCTTCTACCACCGGGCCACCGATATGTACGGAAAGACAACCGCCGAGGGG
 
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JMFF034I08+           AAATCCTCTGCGGGATCGACAGTGACGGCTTCTCCACTGAAACCACCGCACAAGACCGCC
JMFF003K24+           AAATCCTCTGCGGGATCGACAGTGACGGCTTCTCCACTGAAACCACCGCACAAGACCGCC
JMFF047P04+           AAATCCTCTGCGGGATCGACAGTGACGGCTTCTCCACTGAAACCACCGCACAAGACCGCC
JMFF050L08+           AAATCCTCTGCGGGATCGACAGTGACGGCTTCTCCACTGAAACCACCGCACAAGACCGCC
                      ____________________________________________________________
consensus             AAATCCTCTGCGGGATCGACAGTGACGGCTTCTCCACTGAAACCACCGCACAAGACCGCC
 
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JMFF034I08+           CAACGGATGAAGCATTAACGTGCGAGGGAAGGGTGGCACGGACATCCAACGCAGCGCCGC
JMFF003K24+           CAACGGATGAAGCATTAACGTGCGAGGGAAGGGTGGCACGGACATCCAACGCAGCGCCGC
JMFF047P04+           CAACGGATGAAGCATTAACGTGCGAGGGAAGGGTGGCACGGACATCCAACGCAGCGCCGC
JMFF050L08+           CAACGGATGAAGCATTAACGTGCGAGGGAAGGGTGGCACGGACATCCAACGCAGCGCCGC
                      ____________________________________________________________
consensus             CAACGGATGAAGCATTAACGTGCGAGGGAAGGGTGGCACGGACATCCAACGCAGCGCCGC
 
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JMFF034I08+           CGCCGCCGCCGCCCACCCCTGCCTTCAAACAAAGAGTGTCCATCTGGTTGGCGTTGGAGG
JMFF003K24+           CGCCGCCGCCGCCCACCCCTGCCTTCAAACAAAGAGTGTCCATCTGGTTGGCGTTGGAGG
JMFF047P04+           CGCCGCCGCCGCCCACCCCTGCCTTCAAACAAAGAGTGTCCATCTGGTTGGCGTTGGAGG
JMFF050L08+           CGCCGCCGCCGCCCACCCCTGCCTTCAAACAAAGAGTGTCCATCTGGTTGGCGTTGGAGG
                      ____________________________________________________________
consensus             CGCCGCCGCCGCCCACCCCTGCCTTCAAACAAAGAGTGTCCATCTGGTTGGCGTTGGAGG
 
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JMFF034I08+           GTGGTGGGGACCCAGACCGAGCCCGGCCAGAGTGGGCTGTGTACTTGTGTAGAACGCGGA
JMFF003K24+           GTGGTGGGGACCCAGACCGAGCCCGGCCAGAGTGGGCTGTGTACTTGTGTAGAACGCGGA
JMFF047P04+           GTGGTGGGGACCCAGACCGAGCCCGGCCAGAGTGGGCTGTGTACTTGTGTAGAACGCGGA
JMFF050L08+           GTGGTGGGGACCCAGACCGAGCCCGGCCAGAGTGGGCTGTGTACTTGTGTAGAACGCGGA
                      ____________________________________________________________
consensus             GTGGTGGGGACCCAGACCGAGCCCGGCCAGAGTGGGCTGTGTACTTGTGTAGAACGCGGA
 
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JMFF034I08+           GCTCTTAGGTTGTACACCAATGTTTGAATTCCTTAGTACTATCGATTGACTTTGTAGAAG
JMFF003K24+           GCTCTTAGGTTGTACACCAATGTTTGAATTCCTTAGTACTATCGATTGACTTTGTAGAAG
JMFF047P04+           GCTCTTAGGTTGTACACCAATGTTTGAATTCCTTAGTACTATCGATTGACTTTGTAGAAG
JMFF050L08+           GCTCTTAGGTTGTACACCAATGTTTGAATTCCTTAGTACTATCGATTGACTTTGTAGAAG
                      ____________________________________________________________
consensus             GCTCTTAGGTTGTACACCAATGTTTGAATTCCTTAGTACTATCGATTGACTTTGTAGAAG
 
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JMFF034I08+           GATCA                                                       
JMFF003K24+           GATCA                                                       
JMFF047P04+           GATCA                                                       
JMFF050L08+           GATCACAAGAGAGGATGAAAGAAAGAACGAAAGCTTCTGTTATAACGACACACAAACACC
                      ____________________________________________________________
consensus             GATCACAAGAGAGGATGAAAGAAAGAACGAAAGCTTCTGTTATAACGACACACAAACACC