Contig 002998:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022M13Sequence433002452 (4)721002998 (2)ref|XP_010651244.1|2e-120PREDICTED: uncharacterized protein LOC100260310 isoform X1 [Vitis vinifera]
JMSF048K20Sequence707002452 (4)gb|KDP22086.1|1e-41hypothetical protein JCGZ_25917 [Jatropha curcas]744002998 (2)gb|KJB21895.1|3e-58hypothetical protein B456_004G019700 [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF022M13+ GGTTGGGGAAGACAGAACAATTGTTAGTCCCGTCAGTGGAACTACT
                      ____________________________________________________________
consensus GGTTGGGGAAGACAGAACAATTGTTAGTCCCGTCAGTGGAACTACT
 
. : . : . : . : . : . :
rJMFF022M13+ CGTGATGCAATTGATACAGAGTTTACTGGATCAGATGGACAGAAATATCGTCTCATTGAT
                      ____________________________________________________________
consensus CGTGATGCAATTGATACAGAGTTTACTGGATCAGATGGACAGAAATATCGTCTCATTGAT
 
. : . : . : . : . : . :
rJMFF022M13+ ACTGCAGGAATAAGGAAAAAGGCAACTGTGGCTTCATCTGGTAGCATAACAGAAGCTTTA
                      ____________________________________________________________
consensus ACTGCAGGAATAAGGAAAAAGGCAACTGTGGCTTCATCTGGTAGCATAACAGAAGCTTTA
 
. : . : . : . : . : . :
rJMFF022M13+ TCTGTAAATCAAGCATTCCGTGCAATACGTCGTTCAGATGTTGTGGCTCTTGTAATTGAG
                      ____________________________________________________________
consensus TCTGTAAATCAAGCATTCCGTGCAATACGTCGTTCAGATGTTGTGGCTCTTGTAATTGAG
 
. : . : . : . : . : . :
rJMFF022M13+ GCTATGTCTTGCATCACTGAGCAGGATTGCAAGATTGCAGAAAGGATAGAGAAGGAAGGC
                      ____________________________________________________________
consensus GCTATGTCTTGCATCACTGAGCAGGATTGCAAGATTGCAGAAAGGATAGAGAAGGAAGGC
 
. : . : . : . : . : . :
rJMFF022M13+ AAAGGTTGCCTCGTTGTTGTAAATAAGTGGGACACAATTCCAACAAAAACCAATCAACTG
                      ____________________________________________________________
consensus AAAGGTTGCCTCGTTGTTGTAAATAAGTGGGACACAATTCCAACAAAAACCAATCAACTG
 
. : . : . : . : . : . :
rJMFF022M13+ CAACTTACTATGAGCAAGATGTTAGGGGGAAGCTCCGTGTTCTTGGTTGGGCACCTATTG
                      ____________________________________________________________
consensus CAACTTACTATGAGCAAGATGTTAGGGGGAAGCTCCGTGTTCTTGGTTGGGCACCTATTG
 
. : . : . : . : . : . :
rJMFF022M13+ TGTATTCAACTGCAATAGCAGGGCATAGCGTCGACAAAATTATTGTTACTGCTGCTGCTG
rJMSF048K20+ AAATTATTGTTACTGCTGCTGCTG
                      ____________________________________________________________
consensus TGTATTCAACTGCAATAGCAGGGCATAGCGTCGACAAAATTATTGTTACTGCTGCTGCTG
 
. : . : . : . : . : . :
rJMFF022M13+ TTGAAAAAGAGAGATCAAGAAGATTAACCACGGCAATTCTGAATCAAGTGGTACGGGAGG
rJMSF048K20+ TTGAAAAAGAGAGATCAAGAAGATTAACCACGGCAATTCTGAATCAAGTGGTACGGGAGG
                      ____________________________________________________________
consensus TTGAAAAAGAGAGATCAAGAAGATTAACCACGGCAATTCTGAATCAAGTGGTACGGGAGG
 
. : . : . : . : . : . :
rJMFF022M13+ CAGTGGCGTTCAAATCACCTCCAAGGACTAGAGGTGGGAAGAGGGGTCGTGTATATTATT
rJMSF048K20+ CAGTGGCGTTCAAATCACCTCCAAGGATTAGAGGTGGGAAGAGGGGTCGTGTATATTATT
                      ____________________________________________________________
consensus CAGTGGCGTTCAAATCACCTCCAAGGATTAGAGGTGGGAAGAGGGGTCGTGTATATTATT
 
. : . : . : . : . : . :
rJMFF022M13+ GCACTCAGGCTGCTATTAGACCACCTACCTTTGTCTTCTTTGTCAATGATGCAAAACTTT
rJMSF048K20+ GCACTCAGGCTGCTATTAGACCACCTACCTTTGTCTTCTTTGTCAATGATGCAAAACTTT
                      ____________________________________________________________
consensus GCACTCAGGCTGCTATTAGACCACCTACCTTTGTCTTCTTTGTCAATGATGCAAAACTTT
 
. : . : . : . : . : . :
rJMFF022M13+ TCTCCGAGACATACCGACGGTACATGGAAAAGCAACTGAGATCAAGTGCAGGGTTCTCGG
rJMSF048K20+ TCTCCGAGACATACCGACGGTACATGGAAAAGCAACTGAGATCAAGTGCAGGGTTCTCGG
                      ____________________________________________________________
consensus TCTCCGAGACATACCGACGGTACATGGAAAAGCAACTGAGATCAAGTGCAGGGTTCTCGG
 
. : . : . : . : . : . :
rJMFF022M13+ GCACACCTATTCGGC
rJMSF048K20+ GCACACCTATTCGGCTTCTGTGGCGCAGTAGAAGGAAAATGGAAAAAGATGGCGGCAAGG
                      ____________________________________________________________
consensus GCACACCTATTCGGCTTCTGTGGCGCAGTAGAAGGAAAATGGAAAAAGATGGCGGCAAGG
 
. : . : . : . : . : . :
rJMSF048K20+ TTTCTCGAGAGACCTCTACATCGCTAGAAAGAAGACTGGAAGTCGCAAAATGAGCCAATG
                      ____________________________________________________________
consensus TTTCTCGAGAGACCTCTACATCGCTAGAAAGAAGACTGGAAGTCGCAAAATGAGCCAATG
 
. : . : . : . : . : . :
rJMSF048K20+ CAACATACGACTGCAACTAAGGTATCAATTTGCCATATCTCGGGAAATTTTCTTCTCGGT
                      ____________________________________________________________
consensus CAACATACGACTGCAACTAAGGTATCAATTTGCCATATCTCGGGAAATTTTCTTCTCGGT
 
. : . : . : . : . : . :
rJMSF048K20+ GGAGCAGAAACTAGCTCATGGTTGTAATGAAAAGCAAACGTCGCTTTTTGTTGTCGTGTC
                      ____________________________________________________________
consensus GGAGCAGAAACTAGCTCATGGTTGTAATGAAAAGCAAACGTCGCTTTTTGTTGTCGTGTC
 
. : . : . : . : . : . :
rJMSF048K20+ TCTATAAAGCTCGTCGATCCACCGAGTCTACATTGAGAATGAGATGCAATGATCACTTCC
                      ____________________________________________________________
consensus TCTATAAAGCTCGTCGATCCACCGAGTCTACATTGAGAATGAGATGCAATGATCACTTCC
 
. : . : . : . : . : . :
rJMSF048K20+ ATTTTTATGGGCAACATGATCAGTTGAATCTTGACAAAGGTTGTAAAGTGGTGGGGAGAA
                      ____________________________________________________________
consensus ATTTTTATGGGCAACATGATCAGTTGAATCTTGACAAAGGTTGTAAAGTGGTGGGGAGAA
 
. : . : . : . : . : . :
rJMSF048K20+ TGGTGATACCATGAGGGTTCCTTTTAGAAGTGTATGTACTATGTAGTGTGTACATAAGCA
                      ____________________________________________________________
consensus TGGTGATACCATGAGGGTTCCTTTTAGAAGTGTATGTACTATGTAGTGTGTACATAAGCA
 
. : . : . : . : . : . :
rJMSF048K20+ TATACTCTTGTTGTTTGTTTAAGGAACATTACAAAGGAGTTTATTTACTATGGTCCGTCT
                      ____________________________________________________________
consensus TATACTCTTGTTGTTTGTTTAAGGAACATTACAAAGGAGTTTATTTACTATGGTCCGTCT