Contig 002800:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN013E16Sequence616002800 (5)emb|CDP07185.1|4e-102unnamed protein product [Coffea canephora]
JMSF014A22Sequence472003730 (5)ref|XP_009802424.1|3e-38PREDICTED: ABC transporter G family member 14-like [Nicotiana sylvestris]755002800 (5)emb|CDP07185.1|1e-98unnamed protein product [Coffea canephora]
JMSF026D18Sequence656003730 (5)ref|XP_009802424.1|5e-78PREDICTED: ABC transporter G family member 14-like [Nicotiana sylvestris]634002800 (5)emb|CDP07185.1|7e-72unnamed protein product [Coffea canephora]
JMSF030H13Sequence661003730 (5)ref|XP_009802424.1|4e-77PREDICTED: ABC transporter G family member 14-like [Nicotiana sylvestris]647002800 (5)emb|CDP07185.1|8e-83unnamed protein product [Coffea canephora]
JMSF048H02Sequence656003730 (5)ref|XP_009802424.1|6e-77PREDICTED: ABC transporter G family member 14-like [Nicotiana sylvestris]725002800 (5)emb|CDP07185.1|8e-101unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN013E16-                                                                   TTTC
rJMSF048H02+                                                                  TTTC
rJMSF014A22+                                   TTNGGGGGTTCTACCCACTNTACAATGCGGTTTTC
                      ____________________________________________________________
consensus                                      TTNGGGGGTTCTACCCACTNTACAATGCGGTTTTC
 
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JMFN013E16-           ACGTTCCCTCAGGAAAGAAGAATGCTAATCAAAGAAAGATCATCGGGAATGTACCGCCTC
rJMSF048H02+          ACGTTCCNTCAGGAAAGAAGAATGCTAATCAAAGAAAGATCATCGGGAATGTACCGCCTC
rJMSF014A22+          ACGTTCCCTCAGGAAAGAAGAATGCTAATCAAAGAAAGATCATCGGGAATGTACCGCCTC
                      ____________________________________________________________
consensus             ACGTTCCCTCAGGAAAGAAGAATGCTAATCAAAGAAAGATCATCGGGAATGTACCGCCTC
 
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JMFN013E16-           TCGTCCTACTTTCTGGCGAAAACAGTGGGAGATTTGCCACTGGAACTAGCATTACCAACC
rJMSF048H02+          TCGTCCTACTTTCTGGCGAAAACAGTGGGAGATTTGCCACTGGAACTAGCATTACCAACC
rJMSF030H13+                     TCTGGCGAAAACAGTGGGAGATNTGCCACTGGAACTAGCATTACCAACC
rJMSF026D18+                                   TGGGAGATTTNNCACTGGANCTAGCATTACCAACC
rJMSF014A22+          TCGTCCTACTTTCTGGCGAAAACAGTGGGAGATTTGCCACTGGAACTAGCATTACCAACC
                      ____________________________________________________________
consensus             TCGTCCTACTTTCTGGCGAAAACAGTGGGAGATTTGCCACTGGAACTAGCATTACCAACC
 
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JMFN013E16-           GCATTCACCTTCATCCTTTACTGGATGGGAGGGCTCAAACCCGAGCCTCTCACCTTCACC
rJMSF048H02+          GCATTCACCTTCATCCTTTACTGGATGGGAGGGCTCAAACCCGAGCCTCTCACCTTCACC
rJMSF030H13+          GCATTCACCTTCATCCTTTACTGGATGGGAGGGCTCAAACCCGAGCCTCTCACCTTCACC
rJMSF026D18+          GCANTCACCTTCATCCNTTNCTGGATGGGAGGGCTCAAACCCGAGCCTNTCACGTTCACC
rJMSF014A22+          GCATTCACCTTCATCCTTTACTGGATGGGAGGGCTCAAACCCGAGCCTCTCACCTTCACC
                      ____________________________________________________________
consensus             GCATTCACCTTCATCCTTTACTGGATGGGAGGGCTCAAACCCGAGCCTCTCACCTTCACC
 
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JMFN013E16-           CTCTCCCTTCTCATAGTCCTCTTCAGCGTCCTCGTTTCCCAAAGCCTGGGACTCACGTTT
rJMSF048H02+          CTCTCCCTTCTCATAGTCCTCTTCAGCGTCCTCGTTTCCCAAAGCCTGGGACTCGCGTTT
rJMSF030H13+          CTCTCCCTTCTCATAGTCCTCTTCAGCGTCCTCGTTTCCCAAAGCCTGGGACTCGCGTTT
rJMSF026D18+          NTNTNCCTTCTCATAGTCCTATTCAGCGTCTTCGTTTCCCAAAGCNTGGGACTCGCGTTT
rJMSF014A22+          CTCTCCCTTCTCATAGTCCTCTTCAGCGTCCTCGTTTCCCAAAGCCTGGGACTCGCGTTT
                      ____________________________________________________________
consensus             CTCTCCCTTCTCATAGTCCTCTTCAGCGTCCTCGTTTCCCAAAGCCTGGGACTCGCGTTT
 
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JMFN013E16-           GGCGCGATACTCATGGATGTAAAACAAGCCACGACACTAGCATCAGTCACAACGCTAGTC
rJMSF048H02+          GGCGCGATACTCATGGATGTAAAACAAGCCACGACACTAGCATCAGTCACAACGCTAGTC
rJMSF030H13+          GGCGCGATACTCATGGATGTAAAACAAGCCACGACACTAGCATCAGTCACAACGCTAGTC
rJMSF026D18+          GGCGCGATACTCATGGATGTAAAACAAGCCNCGACNCTAGCATCAGTCACAACGNTAGTC
rJMSF014A22+          GGCGCGATACTCATGGATGTAAAACAAGCCACGACACTAGCATCAGTCACAACGCTAGTC
                      ____________________________________________________________
consensus             GGCGCGATACTCATGGATGTAAAACAAGCCACGACACTAGCATCAGTCACAACGCTAGTC
 
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JMFN013E16-           TTCTTAATAGCGGGCGGATACTATGTTCAGCAAATCCCCCCATTCATTCTTTGGCTCAAA
rJMSF048H02+          TTCTTAATAGCGGGCGGATACTATGTTCAGCAAATCCCCCCATTCATTCTTTGGCTCAAA
rJMSF030H13+          TTCTTAATAGCGGGCGGATACTATGTTCAGCAAATCCCCCCATTCATTCTTTGGCTCAAA
rJMSF026D18+          TTCTTAATAGCGGGCGGATACTATGTTCAGCAAATCCCCCCATTCATTNTTTGGCTCAAA
rJMSF014A22+          TTNTTAATAGCGGGCGGATACTATGTTCAGCAAATCCCCCCATTCATTCTTTGGCTCAAA
                      ____________________________________________________________
consensus             TTCTTAATAGCGGGCGGATACTATGTTCAGCAAATCCCCCCATTCATTCTTTGGCTCAAA
 
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JMFN013E16-           TACTTGAGCTACAGCTTCTACTGCTTCAAGCTTCTTCTCGGGGTTCAGTACAACGATAAC
rJMSF048H02+          TACTTGAGCTACAGCTTCTACTGCTTCAAGCTTCTTCTCGGGGTTCAGTACAACGATAAC
rJMSF030H13+          TACTTGAGCTACAGCTTCTACTGCTTCAAGCTTCTTCTCGGGGTTCAGTACAACGATAAC
rJMSF026D18+          TACTTGAGNTACAGNTTNTNCTGCTTCAAGCTTCTTNTCGGGGTTCAGTACAACGATAAC
rJMSF014A22+          TACTTGAGCTACAGCTTCTACTGCTTCAAGCTTCTTCTCGGGGTTCAGTACAACGATAAC
                      ____________________________________________________________
consensus             TACTTGAGCTACAGCTTCTACTGCTTCAAGCTTCTTCTCGGGGTTCAGTACAACGATAAC
 
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JMFN013E16-           GACTACTACGAGTGCTCAAAAGGACACTACTGTCGCGTTGCAGACTTCCCCGGTGTCAAA
rJMSF048H02+          GACTACTACGAGTGCTCAAAAGGACACTACTGTCGCGTTGCAGACTTCCCCGGTGTCAAA
rJMSF030H13+          GACTACTACGAGTGCTCAAAAGGACACTACTGTCGCGTTGCAGACTTCCCCGGTGTCAAA
rJMSF026D18+          GACTNCTACGAGTGCTCAAAAGGACACTACTGTCGCGTTGCAGACTTCCCCGGTGTCAAA
rJMSF014A22+          GACTACTACGAGTGCTCAAAAGGACACTACTGTCGCGTTGCAGACTTCCCCGGTGTCAAA
                      ____________________________________________________________
consensus             GACTACTACGAGTGCTCAAAAGGACACTACTGTCGCGTTGCAGACTTCCCCGGTGTCAAA
 
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JMFN013E16-           GCTGTGGGCTTTAACCATATGTGGGTGGACGTGTCCGTTATGGCAATGATGCTCGTGGGC
rJMSF048H02+          GCTGTGGGCTTTAACCATATGTGGGTGGACGTGTCCGTTATGGCAATGATGCTCGTGGGC
rJMSF030H13+          GCTGTGGGCTTTAACCATATGTGGGTGGACGTGTCCGTTATGGCAATGATGCTCGTGGGC
rJMSF026D18+          GCTGTGGGCTTTAACCATATGTGGGTGGACGTGTCCGTTATGGCAATGATGCTCGTGGGC
rJMSF014A22+          GCTGTGGGCTTTAACCATATGTGGGTGGACGTGTCCGTTATGGCAATGATGCTCGTGGGC
                      ____________________________________________________________
consensus             GCTGTGGGCTTTAACCATATGTGGGTGGACGTGTCCGTTATGGCAATGATGCTCGTGGGC
 
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JMFN013E16-           TACCGGTTTATCGCCTACCTAGCACTCCACCGTGTTCGATGAAGCTCATCACCAGCATAA
rJMSF048H02+          TACCGGTTTATCGCCTACCTAGCACTCCACCGTGTTCGATGAAGCTCATCACCAGCATAA
rJMSF030H13+          TACCGGTTTATCGCCTACCTAGCACTCCACCGTGTTCGATGAAGCTCATCACCAGCATAA
rJMSF026D18+          TACCGGTTTATCGCCTACNTAGCACTCCACCGTGTTCGATGAAGCTCATCACCAGCATAA
rJMSF014A22+          TACCGGTTTATCGCCTACCTAGCACTCCACCGTGTTCGATGAAGCTCATCACCAGCATAA
                      ____________________________________________________________
consensus             TACCGGTTTATCGCCTACCTAGCACTCCACCGTGTTCGATGAAGCTCATCACCAGCATAA
 
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JMFN013E16-           AAGACAATAAC                                                 
rJMSF048H02+          AAGACAATAACCACACTCTCGAGTCTCAACAAAGAAGCCAGTTAGAAGACGAGTTTTACA
rJMSF030H13+          AAGACAATAACCACACTCTCGAGTCTCAACAAAGAAGCCAGTTAGAAGACGAGTTTTACA
rJMSF026D18+          AAGNCAATAACCACACTCTCGAGTCTCAACAAAGAAGCCAGTTAGAAGACGAGTTTTACA
rJMSF014A22+          AAGACAATAACCACACTCTCGAGTCTCAACAAAGAAGCCAGTTAGAAGACGAGTTTTACA
                      ____________________________________________________________
consensus             AAGACAATAACCACACTCTCGAGTCTCAACAAAGAAGCCAGTTAGAAGACGAGTTTTACA
 
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rJMSF048H02+          TCCCTTCAAACTGATCAGTAATAATGTAGAACTTAGGTTATAATCCCCCCAT        
rJMSF030H13+          TCCCTTCAAACTGATCAGTAATAATGTAGAACTTAGGTTATAATCCCCCCAT        
rJMSF026D18+          TCCCTTCAAANGGATCAGTAATAANGTAGAACTTAGGTNATAATCCCCCCAT        
rJMSF014A22+          TCCCTTCAAACTGATCAGTAATAATGTAGAACTTAGGTTATAATCCCCCCATTTGCCAGA
                      ____________________________________________________________
consensus             TCCCTTCAAACTGATCAGTAATAATGTAGAACTTAGGTTATAATCCCCCCATTTGCCAGA