Contig 002366:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037J22Sequence692002366 (2)ref|XP_010255617.1|359PREDICTED: uncharacterized protein LOC104596236 [Nelumbo nucifera] ref|XP_010255612010039 (2)ref|XP_002309914.2|8e-55SWIM zinc finger family protein [Populus trichocarpa] gb|EEE90364.2| SWIM zinc f
JMSF043C15Sequence761002366 (2)ref|XP_010255617.1|405PREDICTED: uncharacterized protein LOC104596236 [Nelumbo nucifera] ref|XP_010255783010039 (2)ref|XP_009613006.1|283PREDICTED: uncharacterized protein LOC104106214 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF043C15+ TCAATGTGCTTCTCTAAAACATTTTCCTCAGGAATGCCAAGAT
                      ____________________________________________________________
consensus TCAATGTGCTTCTCTAAAACATTTTCCTCAGGAATGCCAAGAT
 
. : . : . : . : . : . :
JMSF043C15+ AGATCATAGACATAGTTTGCTGTTGAATCTCATTGCAAATATATGGGATCTTTTTAGCAC
JMSF037J22+ CTCATTGCAAATATATGGGATCTTTTTAGCAC
                      ____________________________________________________________
consensus AGATCATAGACATAGTTTGCTGTTGAATCTCATTGCAAATATATGGGATCTTTTTAGCAC
 
. : . : . : . : . : . :
JMSF043C15+ CAGGTCCAATAGCATCTCTATCAAGTGGTCCATGGCACACAAAGCCAGACTTGTTGACAT
JMSF037J22+ CAGGTCCAATAGCATCTCTATCAAGTGGTCCATGGCACACAAAGCCAGACTTGTTGACAT
                      ____________________________________________________________
consensus CAGGTCCAATAGCATCTCTATCAAGTGGTCCATGGCACACAAAGCCAGACTTGTTGACAT
 
. : . : . : . : . : . :
JMSF043C15+ GACGCCTATTGTTAAATATTAGGAGTGCAAGGGACGGGCAGGCATACAAACGCTTCACCA
JMSF037J22+ GACGCCTATTGTTAAATATTAGGAGTGCAAGGGACGGGCAGGCATACAAACGCTTCACCA
                      ____________________________________________________________
consensus GACGCCTATTGTTAAATATTAGGAGTGCAAGGGACGGGCAGGCATACAAACGCTTCACCA
 
. : . : . : . : . : . :
JMSF043C15+ CGAAATGGCATGTACATCCCCTCATAGATTGGGGTCGAGCAGCGCGGTTTCGAGTGTTGA
JMSF037J22+ CGAAATGGCATGTACATCCCCTCATAGATTGGGGTCGAGCAGCGCGGTTTCGAGTGTTGA
                      ____________________________________________________________
consensus CGAAATGGCATGTACATCCCCTCATAGATTGGGGTCGAGCAGCGCGGTTTCGAGTGTTGA
 
. : . : . : . : . : . :
JMSF043C15+ GTCGATACCTTCGGCTTGGTAATATACCTCCTCCTTCTCCATAGTTTTCAGGGCCAAATG
JMSF037J22+ GTCGATACCTTCGGCTTGGTAATATACCTCCTCCTTCTCCATAGTTTTCAGGGCCAAATG
                      ____________________________________________________________
consensus GTCGATACCTTCGGCTTGGTAATATACCTCCTCCTTCTCCATAGTTTTCAGGGCCAAATG
 
. : . : . : . : . : . :
JMSF043C15+ AACACCAATACATCCTGTACTCCAAGTATTCATCAGGCCTATATTCTTTTAAACTCCCTT
JMSF037J22+ AACACCAATACATCCTGTACTCCAAGTATTCATCAGGCCTATATTCTTTTAAACTCCCTT
                      ____________________________________________________________
consensus AACACCAATACATCCTGTACTCCAAGTATTCATCAGGCCTATATTCTTTTAAACTCCCTT
 
. : . : . : . : . : . :
JMSF043C15+ CAACTCGTTTCCTCCCCCTCTCAATGTGGAATCTTGTTGGGCATTCCACATTCGAACATT
JMSF037J22+ CAACTCGTTTCCTCCCCCTCTCAATGTGGAATCTTGTTGGGCATTCCACATTCGAACATT
                      ____________________________________________________________
consensus CAACTCGTTTCCTCCCCCTCTCAATGTGGAATCTTGTTGGGCATTCCACATTCGAACATT
 
. : . : . : . : . : . :
JMSF043C15+ CTCCGATAATGAAAGCATCAACACGGTCATAAGGAATAAGGGCAACCTCATCTTGGTGCT
JMSF037J22+ CTCCGATAATGAAAGCATCAACACGGTCATAAGGAATAAGGGCAACCTCATCTTGGTGCT
                      ____________________________________________________________
consensus CTCCGATAATGAAAGCATCAACACGGTCATAAGGAATAAGGGCAACCTCATCTTGGTGCT
 
. : . : . : . : . : . :
JMSF043C15+ CTGCACTCCCAAACTTGGTCCAATTCAAATCAGCAGATGAGAAGTCTTCCCCTGGCGGGT
JMSF037J22+ CTGCACTCCCAAACTTGGTCCAATTCAAATCAGCAGATGAGAAGTCTTCCCCTGGCGGGT
                      ____________________________________________________________
consensus CTGCACTCCCAAACTTGGTCCAATTCAAATCAGCAGATGAGAAGTCTTCCCCTGGCGGGT
 
. : . : . : . : . : . :
JMSF043C15+ TTTGCACAACAAGACTTTGAATGGACTCAACTATATCCATCCCTGAAAAGCTTCGGCCGG
JMSF037J22+ TTTGCACAACAAGACTTTGAATGGACTCAACTATATCCATCCCTGAAAAGCTTCGGCCGG
                      ____________________________________________________________
consensus TTTGCACAACAAGACTTTGAATGGACTCAACTATATCCATCCCTGAAAAGCTTCGGCCGG
 
. : . : . : . : . : . :
JMSF043C15+ ATAAGAGAGAAGCCGAGACACGCCGGAAGTGGCAACGGAGATGAGTGGAGTGTATTTCTT
JMSF037J22+ ATAAGAGAGAAGCCGAGACACGCCGGAAGTGGCAACGGAGATGAGTGGAGTGTATTTCTT
                      ____________________________________________________________
consensus ATAAGAGAGAAGCCGAGACACGCCGGAAGTGGCAACGGAGATGAGTGGAGTGTATTTCTT
 
. : . : . : . : . : . :
JMSF043C15+ TCTTTTCGACGGCGGGGAATTTACAGGGCCGACTTTTCAAGGTATGCTTCAATCACC
JMSF037J22+ TCTTTTCGACGGCGGGGAATTTACAGGGCCGACTTTTCAAGGTATGCTTCAATCACCGGC
                      ____________________________________________________________
consensus TCTTTTCGACGGCGGGGAATTTACAGGGCCGACTTTTCAAGGTATGCTTCAATCACCGGC