Contig 002142:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025L21Sequence521002142 (7)gb|AAV88066.1|2e-05NBS-LRR protein [Ipomoea batatas]765012314 (4)ref|XP_011075746.1|3e-21PREDICTED: putative late blight resistance protein homolog R1A-10 [Sesamum indi
JMFF026N09Sequence481002142 (7)gb|AAV88066.1|2e-05NBS-LRR protein [Ipomoea batatas]756012314 (4)ref|XP_011075746.1|6e-20PREDICTED: putative late blight resistance protein homolog R1A-10 [Sesamum indi
JMSF008O07Sequence236002142 (7)688012314 (4)ref|XP_009618655.1|4e-13PREDICTED: putative late blight resistance protein homolog R1B-16 [Nicotiana to
JMSF009H13Sequence411002142 (7)gb|AAV88066.1|8e-08NBS-LRR protein [Ipomoea batatas]803001470 (3)ref|XP_009764014.1|5e-17PREDICTED: putative late blight resistance protein homolog R1A-3 isoform X2 [Ni
JMSF012G12Sequence436002142 (7)gb|AAV88066.1|1e-07NBS-LRR protein [Ipomoea batatas]681001470 (3)gb|AAF09256.1|AF202179_12e-11disease resistance protein BS2 [Capsicum chacoense]
JMSF045G07Sequence767002142 (7)gb|AAV88066.1|2e-18NBS-LRR protein [Ipomoea batatas]780001470 (3)gb|AAF09256.1|AF202179_14e-18disease resistance protein BS2 [Capsicum chacoense]
JMSF048B16Sequence715002142 (7)gb|AAV88066.1|3e-19NBS-LRR protein [Ipomoea batatas]789012314 (4)ref|XP_011075746.1|6e-22PREDICTED: putative late blight resistance protein homolog R1A-10 [Sesamum indi

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048B16+ ACGCAACAATCCACGCTCGCACATCAAAGTGGGT
                      ____________________________________________________________
consensus ACGCAACAATCCACGCTCGCACATCAAAGTGGGT
 
. : . : . : . : . : . :
JMSF048B16+ AGAAATTGGTGAATCTTCATAGACTNGTCTAGCCAAAGTTGTCTTACCGATTCCTCCCAT
JMSF045G07+ AAAGTTGTCTTACCGATTCCTCCCAT
                      ____________________________________________________________
consensus AGAAATTGGTGAATCTTCATAGACTNGTCTAGCCAAAGTTGTCTTACCGATTCCTCCCAT
 
. : . : . : . : . : . :
JMSF048B16+ ACCTGTAATTGCTATAACCTTTTTTTCCTTAGATCCATGTCCAGTTAGCAGCTTCTTGAT
JMSF045G07+ ACCTATAATTGATACAACTTTTTTTTCCTTAGGTCCAAGTTCAGTTAGCAGCTTCTTGAT
                      ____________________________________________________________
consensus ACCTGTAATTGCTATAACTTTTTTTTCCTTAGGTCCATGTTCAGTTAGCAGCTTCTTGAT
 
. : . : . : . : . : . :
JMFF025L21+ TTGGAGTGTGAAGCATGCTGGAT
JMSF048B16+ TATCTCAAACTCATCTTTTTTTCCGACCATTTCTTCTTTGGAGTGTGAAGCATGCTGGAT
JMSF045G07+ TATCTCAAACTCGTCTTTTTTCCCGATCATTTGTTCCTTGGAGTGTGAAGCACGCTGGGA
                      ____________________________________________________________
consensus TATCTCAAACTCGTCTTTTTTTCCGATCATTTGTTCTTTGGAGTGTGAAGCATGCTGGAT
 
. : . : . : . : . : . :
JMFF025L21+ GGAAAGAACTTGAAACCTTTGTAGAACATCATGGGCTGTCTTTCTTCCTTCTGCCTCGTC
JMFF026N09+ CTTTGTAGAACATCATGGGCTGTCTTTCTTCCTTCTGCCTCGTC
JMSF048B16+ GGAAAGAACTTGAAACCTTTGTAGAACATCATGGGCTGTCTTTCTTCCTTCTGCCTCGTC
JMSF045G07+ GGAAAGAAGTTGAGACCTTTGTAGAACATCATGGGCTGTCTTTCTTCCTT---CATCGTC
                      ____________________________________________________________
consensus GGAAAGAACTTGAAACCTTTGTAGAACATCATGGGCTGTCTTTCTTCCTTCTGCCTCGTC
 
. : . : . : . : . : . :
JMFF025L21+ TATATTCTTGATTTTCACCAACTCTTCCTTGATGGCTTCAATTTCTTCCATTGCACTTTG
JMFF026N09+ TATATTCTTGATTTTCACCAACTCTTCCTTGATGGCTTCAATTTCTTCCATTGCACTTTG
JMSF048B16+ TATATTCTTGATTTTCACCAACTCTTCCTTGATGGCTTCAATTTCTTCCATTGCACTTTG
JMSF045G07+ CATATTCTTGATTTTCACCAACTCTTCCTTGATGGCTTCAATTTCTTCCATTGCACTTTG
                      ____________________________________________________________
consensus TATATTCTTGATTTTCACCAACTCTTCCTTGATGGCTTCAATTTCTTCCATTGCACTTTG
 
. : . : . : . : . : . :
JMFF025L21+ AAAAACTTGATGAAGTTTCACACAATAAGGCTCAGCCTCGTCCCCTTCTGTGTCCCCCTG
JMFF026N09+ AAAAACTTGATGAAGTTTCACACAATAAGGCTCAGCCTCGTCCCCTTCTGTGTCCCCCTG
JMSF048B16+ AAAAACTTGATGAAGTTTCACACAATAAGGCTCAGCCTCGTCCCCTTCTGTGTCCCTCTG
JMSF045G07+ AAAAATTTGATGAAGTTTCACACAATAAGGCTGAGTCTTCTCCCCTTCTGTGTCCCTCTG
                      ____________________________________________________________
consensus AAAAACTTGATGAAGTTTCACACAATAAGGCTCAGCCTCGTCCCCTTCTGTGTCCCTCTG
 
. : . : . : . : . : . :
JMFF025L21+ TGGTTTTTCCTTTTTCAAAACGAAATCTGCTAAAT--------CCCTCATCTTCATGATA
JMFF026N09+ TGGTTTTTCCTTTTTCAAAACGAAATCTGCTAAAT--------CCCTCATCTTCATGATA
JMSF048B16+ TGGTTTTTCCTTTTTCAAAACGAAATCTGCTAAAT--------CCCTCATCTTCATGATA
JMSF045G07+ TGGTTTTTCCTCTTTCAAAACGAGATCTGCTATTTTGACTTTATCTTCCTCTTCATCATA
JMSF009H13+ TCTTCATCATA
JMSF012G12+ TCTTCATCATA
                      ____________________________________________________________
consensus TGGTTTTTCCTTTTTCAAAACGAAATCTGCTAAAT--------CCCTCATCTTCATGATA
 
. : . : . : . : . : . :
JMFF025L21+ AAGGTGTGCTACTAGGATTTCGATTTCATCTTCCACTCTGTAAGCTAAATCCCTGAGCTT
JMFF026N09+ AAGGTGTGCTACTAGGATTTCGATTTCATCTTCCACTCTGTAAGCTAAATCCCTGAGCTT
JMSF008O07+ TTCCACTCTGTAAGCTAAATCGCTGAGCTT
JMSF048B16+ AAGGTGTGCTACTAGGATTTCGATTTCATCTTCCACTCTGTAAGCTAAATCCCTGAGCTT
JMSF045G07+ AAGGTGTGCTACTAGGAATTCGATTTCATCTTCCACTCTGAACGCTAAATCCCTGAGCTT
JMSF009H13+ AAGGTGTGCTACTAGGAATTCGATTTCATCTTCCACTCTGAACGCTAAATCCCTGAGCTT
JMSF012G12+ AAGGTGTGCTACTAGGAATTCGATTTCATCTTCCACTCTGAACGCTAAATCCCTGAGCTT
                      ____________________________________________________________
consensus AAGGTGTGCTACTAGGATTTCGATTTCATCTTCCACTCTGTAAGCTAAATCCCTGAGCTT
 
. : . : . : . : . : . :
JMFF025L21+ GGTTTCCAAGCGTTTAACTGCTTCAACACCATC------GATTCTTTCCTCATCGTGCTG
JMFF026N09+ GGTTTCCAAGCGTTTAACTGCTTCAACACCATC------GATTCTTTCCTCATCGTGCTG
JMSF008O07+ GGTTTCCAAGCGTTTAACTGCTTCAACACCATC------GATTCTTTCCTCATCGTGCTG
JMSF048B16+ GGTTTCCAAGCGTTTAACTGCTTCAATACCATC------GATTCTTTCCTCATCGTGCTG
JMSF045G07+ CGTTTCCAAGTGTTTAACTGCTTCAACACCATCCATATTGATTCTTTTCTGATCGAATTG
JMSF009H13+ CGTTTCCAAGTGTTTAACTGCTTCAACACCATCCATATTGATTCTTTTCTGATCGAATTG
JMSF012G12+ CGTTTCCAAGTGTTTAACTGCTTCAACACCATCCATATTGATTCTTTTCTGATCGAATTG
                      ____________________________________________________________
consensus GGTTTCCAAGCGTTTAACTGCTTCAACACCATC------GATTCTTTCCTCATCGTGCTG
 
. : . : . : . : . : . :
JMFF025L21+ ACTTATGAGAAATCCAAGCTTTTGGTGGAAAGATTGGATCAATTCTTTGTTGAAAGGGAT
JMFF026N09+ ACTTATGAGAAATCCAAGCTTTTGGTGGAAAGATTGGATCAATTCTTTGTTGAAAGGGAT
JMSF008O07+ ACTTATGAGAAATCCAAGCTTTTGGTGGAAAGATTGGATCAATTCTTTGTTGAAAGGGAT
JMSF048B16+ ACTTATGAGAAATCCAAGCTTTTGGTGGAAAGATTGGATCAATTCTTTGTTGAAAGGGAT
JMSF045G07+ GGTTATGAGAAATCCAAGGTTTTGGTGGAAAGATTGGATCAAGTCTTTGTTGGGAGAGAT
JMSF009H13+ GGTTATGAGAAATCCAAGGTTTTGGTGGAAAGATTGGATCAAGTCTTTGTTGGGAGAGAT
JMSF012G12+ GGTTATGAGAAATCCAAGGTTTTGGTGGAAAGATTGGATCAAGTCTTTGTTGGGAGAGAT
                      ____________________________________________________________
consensus ACTTATGAGAAATCCAAGCTTTTGGTGGAAAGATTGGATCAATTCTTTGTTGAAAGGGAT
 
. : . : . : . : . : . :
JMFF025L21+ GAGATGATTGTACTGTACAAGTGGACGAGGGTGATATTGTAAGAACTCAAGCTCTATTGT
JMFF026N09+ GAGATGATTGTACTGTACAAGTGGACGAGGGTGATATTGTAAGAACTCAAGCTCTATTGT
JMSF008O07+ GAGATGATTGTACTGTACAAGTGGACGAGGGTGATATTGTAAGAACTCAAGCTCTATTGT
JMSF048B16+ GAGATGATTGTACTGTACAAGTGGACGAGGGTGATATTGTAAGAACTCAAGCTCTATTGT
JMSF045G07+ GAGATGATAGTGCAGTGCAAGTGGACGAGGCTTATATTGCAAGAATTCAAGCTCTATTGT
JMSF009H13+ GAGATGATAGTGCAGTGCAAGTGGACGAGGCTTATATTGCAAGAATTCAAGCTCTATTGT
JMSF012G12+ GAGATGATAGTGCAGTGCAAGTGGACGAGGCTTATATTGCAAGAATTCAAGCTCTATTGT
                      ____________________________________________________________
consensus GAGATGATTGTACTGTACAAGTGGACGAGGGTGATATTGTAAGAACTCAAGCTCTATTGT
 
. : . : . : . : . : . :
JMFF025L21+ TCTCAGAAGAGAAGCTACAGCTACACA
JMFF026N09+ TCTCAGAAGAGAAGCTACAGCTACACA
JMSF008O07+ TCTCAGAAGAGAAGCTACAGCTACACAAGCC
JMSF048B16+ TCTCAGAAGAGAAGCTACAGCTACACAAGCCAT
JMSF045G07+ TCTGAGAAGAGAAGCTACAGCTACACAAGCCATTCTTCGATCTCTAGATCTGAAACTGCA
JMSF009H13+ TCTGAGAAGAGAAGCTACAGCTACACAAGCCATTCTTCGATCTCTAGATCTGAAACTGCA
JMSF012G12+ TCTGAGAAGAGAAGCTACAGCTACACAAGCCATTCTTCGATCTCTAGATCTGAAACTGCA
                      ____________________________________________________________
consensus TCTCAGAAGAGAAGCTACAGCTACACAAGCCATTCTTCGATCTCTAGATCTGAAACTGCA
 
. : . : . : . : . : . :
JMSF045G07+ ACTTTTTTGATTGATTATTGTGGGTAAGGTTTCACAGAAATGAAGATGCAAGTGGAA
JMSF009H13+ ACTTTTTTGATTGATTATTGTGGGTAAGGTTTCACAGAAATGAAGATGCAAGTGGAA
JMSF012G12+ ACTTTTTTGATTGATTATTGTGGGTAAGGTTTCACAGAAATGAAGATGCAAGTGGAATTC
                      ____________________________________________________________
consensus ACTTTTTTGATTGATTATTGTGGGTAAGGTTTCACAGAAATGAAGATGCAAGTGGAATTC