Contig 002115:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034A17Sequence507002115 (5)ref|XP_011081744.1|1e-32PREDICTED: receptor-like protein kinase 5 [Sesamum indicum]747006994 (5)ref|XP_006364729.1|3e-82PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum]
JMFF034L24Sequence605002115 (5)ref|XP_011081744.1|4e-50PREDICTED: receptor-like protein kinase 5 [Sesamum indicum]742006994 (5)ref|XP_006364729.1|1e-76PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum]
JMFF049H07Sequence642002115 (5)ref|XP_011081744.1|1e-53PREDICTED: receptor-like protein kinase 5 [Sesamum indicum]641006994 (5)ref|XP_009600836.1|3e-56PREDICTED: receptor-like protein kinase 5 [Nicotiana tomentosiformis]
JMSF009D03Sequence300002115 (5)ref|XP_011081744.1|3e-05PREDICTED: receptor-like protein kinase 5 [Sesamum indicum]791006994 (5)ref|XP_006364729.1|4e-104PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum]
JMSF029A13Sequence596002115 (5)ref|XP_011081744.1|1e-46PREDICTED: receptor-like protein kinase 5 [Sesamum indicum]722006994 (5)ref|XP_006364729.1|3e-97PREDICTED: receptor-like protein kinase 5-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF034L24+ GTTGTAAAAATTTCCTATA
JMFF049H07+ CAAAGAATTCATGGACAAATCTAAGTAGCTAAGGTTGTAAAAATTTCCTATA
                      ____________________________________________________________
consensus CAAAGAATTCATGGACAAATCTAAGTAGCTAAGGTTGTAAAAATTTCCTATA
 
. : . : . : . : . : . :
JMFF034L24+ TCATCTGGTATAGATCCATTCAAATCGTTACTTGAAACATCAAGAGACTCCAAACTATAA
JMFF049H07+ TCATCTGGTATAGATCCATTCAAATCGTTACTTGAAACATCAAGAGACTCCAAACTATAA
JMSF029A13+ ATCTGGTATAGATCCATTCAAATCGTTACTTGAAACATCAAGAGACTCCAAACTATAA
                      ____________________________________________________________
consensus TCATCTGGTATAGATCCATTCAAATCGTTACTTGAAACATCAAGAGACTCCAAACTATAA
 
. : . : . : . : . : . :
JMFF034L24+ GCCACCATGGGTGTCGGTATCTCACCGAACAACATGTTGCCTCGAAGATTTAAACTACGC
JMFF049H07+ GCCACCATGGGTGTCGGTATCTCACCGAACAACATGTTGCCTCGAAGATTTAAACTACGC
JMFF034A17+ CGAACAACATGTTGCCTCGAAGATTTAAACTACGC
JMSF029A13+ GCCACCATGGGTGTCGGTATCTCACCGAACAACATGTTGCCTCGAAGATTTAAACTACGC
                      ____________________________________________________________
consensus GCCACCATGGGTGTCGGTATCTCACCGAACAACATGTTGCCTCGAAGATTTAAACTACGC
 
. : . : . : . : . : . :
JMFF034L24+ AGGGTTTTCATGGAAAAAAACTCACCTGCTATTTTTCCTGTCAAATCATTTATGGATAGA
JMFF049H07+ AGGGTTTTCATGGAAAAAAACTCACCTGCTATTTTTCCTGTCAAATCATTTATGGATAGA
JMFF034A17+ AGGGTTTTCATGGAAAAAAACTCACCTGCTATTTTTCCTGTCAAATCATTTATGGATAGA
JMSF029A13+ AGGGTTTTCATGGAAAAAAACTCACCTGCTATTTTTCCTGTCAAATCATTTATGGATAGA
                      ____________________________________________________________
consensus AGGGTTTTCATGGAAAAAAACTCACCTGCTATTTTTCCTGTCAAATCATTTATGGATAGA
 
. : . : . : . : . : . :
JMFF034L24+ TCTAAGGTTTCAAGCTTTGAGCAGCTGGATAGGTTAGCTGGTATAGTTCCCCAAAGACTA
JMFF049H07+ TCTAAGGTTTCAAGCTTTGAGCAGCTGGATAGGTTAGCTGGTATAGTTCCCCAAAGACTA
JMFF034A17+ TCTAAGGTTTCAAGCTTTGAGCAGCTGGATAGGTTAGCTGGTATAGTTCCCCAAAGACTA
JMSF029A13+ TCTAAGGTTTCAAGCTTTGAGCAGCTGGATAGGTTAGCTGGTATAGTTCCCCAAAGACTA
                      ____________________________________________________________
consensus TCTAAGGTTTCAAGCTTTGAGCAGCTGGATAGGTTAGCTGGTATAGTTCCCCAAAGACTA
 
. : . : . : . : . : . :
JMFF034L24+ TTGGAACTGAAATTGATTGAAACAAGGTTGTTGAGCTGGCATATAATAGCTGAGGCAGGG
JMFF049H07+ TTGGAACTGAAATTGATTGAAACAAGGTTGTTGAGCTGGCATATAATAGCTGAGGCAGGG
JMFF034A17+ TTGGAACTGAAATTGATTGAAACAAGGTTGTTGAGCTGGCATATAATAGCTGAGGCAGGG
JMSF029A13+ TTGGAACTGAAATTGATTGAAACAAGGTTGTTGAGCTGGCATATAATAGCTGAGGCAGGG
                      ____________________________________________________________
consensus TTGGAACTGAAATTGATTGAAACAAGGTTGTTGAGCTGGCATATAATAGCTGAGGCAGGG
 
. : . : . : . : . : . :
JMFF034L24+ AATGATCCTCCCATGATCATTTCGGAGAGAGATATCCGTGTGACACTTCCATTGGAGTTG
JMFF049H07+ AATGATCCTCCCATGATCATTTCGGAGAGAGATATCCGTGTGACACTTCCATTGGAGTTG
JMFF034A17+ AATGATCCTCCCATGATCATTTCGGAGAGAGATATCCGTGTGACACTTCCATTGGAGTTG
JMSF029A13+ AATGATCCTCCCATGATCATTTCGGAGAGAGATATCCGTGTGACACTTCCATTGGAGTTG
                      ____________________________________________________________
consensus AATGATCCTCCCATGATCATTTCGGAGAGAGATATCCGTGTGACACTTCCATTGGAGTTG
 
. : . : . : . : . : . :
JMFF034L24+ CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
JMFF049H07+ CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
JMFF034A17+ CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
JMSF029A13+ CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
JMSF009D03+ CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
                      ____________________________________________________________
consensus CATGAAATTCCAGGCCAGTCACATGGGGAGGAAGTGGAGTTCCACTGCTCAAATAGTGAA
 
. : . : . : . : . : . :
JMFF034L24+ AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
JMFF049H07+ AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
JMFF034A17+ AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
JMSF029A13+ AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
JMSF009D03+ AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
                      ____________________________________________________________
consensus AATGGATACCCCCAGTGTTGTTTTAGGATAAGTAAAATAGCCCTTTCATCCTCCCCATAA
 
. : . : . : . : . : . :
JMFF034L24+ GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
JMFF049H07+ GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
JMFF034A17+ GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
JMSF029A13+ GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
JMSF009D03+ GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
                      ____________________________________________________________
consensus GTGGTTAAAGATTGTGAATAATTTGGGAAGGAGAAAAGGAGGAGCATGAAGAAGAAGAAG
 
. : . : . : . : . : . :
JMFF034L24+ AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAAT
JMFF049H07+ AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAATAATA
JMFF034A17+ AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAATAATA
JMSF029A13+ AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAATAATAAG
JMSF009D03+ AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAATAATAAGATGGTGAG
                      ____________________________________________________________
consensus AAGGCATGATGAATAGGGTGGTGCACCACCATTTTCAGCTAATAATAATAAGATGGTGAG
 
. : . : . : . : . : . :
JMSF009D03+ GATCTTGCTGCTCTCATCTATTATATTATTGTATTGCTTAATGTGAACAACAAAGTTCCC
                      ____________________________________________________________
consensus GATCTTGCTGCTCTCATCTATTATATTATTGTATTGCTTAATGTGAACAACAAAGTTCCC