Contig 001727:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003J15Sequence601001727 (10)ref|XP_006361420.1|4e-94PREDICTED: uncharacterized protein R102.4 isoform X1 [Solanum tuberosum] ref|XP410011715 (12)ref|XP_009798339.1|1e-19PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF006A17Sequence510001727 (10)ref|XP_009631531.1|5e-56PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi836011715 (12)ref|XP_004236787.1|3e-81PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X2 [Solanum
JMFF009H15Sequence436001727 (10)ref|XP_009631531.1|4e-37PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi797011715 (12)ref|XP_009798339.1|5e-98PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF020D04Sequence435001727 (10)ref|XP_009631531.1|1e-36PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi762011715 (12)ref|XP_009798339.1|1e-96PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF023B04Sequence496001727 (10)ref|XP_009631531.1|1e-52PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi736011715 (12)ref|XP_009798339.1|3e-92PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF023J06Sequence463001727 (10)ref|XP_009631531.1|1e-42PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi788011715 (12)ref|XP_009798339.1|1e-106PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF027L13Sequence615001727 (10)ref|XP_009631531.1|3e-98PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi464011715 (12)ref|XP_009798339.1|2e-30PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF034N12Sequence513001727 (10)ref|XP_009631531.1|5e-56PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi796011715 (12)ref|XP_009798339.1|2e-107PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF042J15Sequence640001727 (10)ref|XP_006361420.1|5e-88PREDICTED: uncharacterized protein R102.4 isoform X1 [Solanum tuberosum] ref|XP644011715 (12)ref|XP_009798339.1|3e-62PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF050M22Sequence586001727 (10)ref|XP_009631531.1|3e-72PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi603011715 (12)ref|XP_009798339.1|3e-59PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF027L13+ CTGAGAGGCATCTACCACCAGAG
JMFF003J15+ CCACCAGAG
                      ____________________________________________________________
consensus CTGAGAGGCATCTACCACCAGAG
 
. : . : . : . : . : . :
JMFF027L13+ TGTGCATTTGAATTTTCCAAGCAGATGAGTCTAGTGGTTGGGAAACATATCTCAAATCTA
JMFF003J15+ TGTGCATTTGAATTTTCCAAGCAGATGAGTCTAGTGGTTGGGAAACATATCTCAAATCTA
JMFF042J15+ CAAGCAGATGAGTCTAGTGGTTGGGAAACATATCTCAAATCTA
                      ____________________________________________________________
consensus TGTGCATTTGAATTTTCCAAGCAGATGAGTCTAGTGGTTGGGAAACATATCTCAAATCTA
 
. : . : . : . : . : . :
JMFF027L13+ GGATCTCGGATTGCAGCTTCAATCTGATCAAGATCCATGGTTCCATCATCGTTGTTCTTG
JMFF003J15+ GGATCTCGGATTGCAGCTTCAATCTGATCAAGATCCATGGTTCCATCATCGTTGTTCTTG
JMFF042J15+ GGATCTCGGATTGCAGCTTCAATCTGATCAAGATCCATGGTTCCATCATCGTTGTTCTTG
JMFF050M22+ AGCTTCAATCTGATCAAGATCCATGGTTCCATCATCGTTGTTCTTG
                      ____________________________________________________________
consensus GGATCTCGGATTGCAGCTTCAATCTGATCAAGATCCATGGTTCCATCATCGTTGTTCTTG
 
. : . : . : . : . : . :
JMFF027L13+ ATTGTCCTCGGATGAACACCTCCAATGGTGGAAATACCTCCGTTTTCATAAATGTGGATA
JMFF003J15+ ATTGTCCTCGGATGAACACCTCCAATGGTGGAAATACCTCCGTTTTCATAAATGTGGATA
JMFF042J15+ ATTGTCCTCGGATGAACACCTCCAATGGTGGAAATACCTCCGTTTTCATAAATGTGGATA
JMFF006A17+ TGGAAATACCTCCGTTTTCATAAATGTGGATA
JMFF023B04+ TTCATAAATGTGGATA
JMFF050M22+ ATNGTCCTCGGATGAACACCTCCAATGGTGGAAATACCTCCGTTNTCATAAATGTGGATA
JMFF034N12+ GTGGAAATACCTCCGTTTTCATAAATGTGGATA
                      ____________________________________________________________
consensus ATTGTCCTCGGATGAACACCTCCAATGGTGGAAATACCTCCGTTTTCATAAATGTGGATA
 
. : . : . : . : . : . :
JMFF027L13+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF003J15+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF042J15+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF006A17+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF023B04+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF023J06+ GATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF020D04+ TGAGTAAGAACGCTA
JMFF009H15+ CAATGAGTAAGAACGCTA
JMFF050M22+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
JMFF034N12+ TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
                      ____________________________________________________________
consensus TGCGAATAATCACCAAGGATGATTTCACTTCCCCTAATTGGACAATGAGTAAGAACGCTA
 
. : . : . : . : . : . :
JMFF027L13+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF003J15+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF042J15+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF006A17+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF023B04+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF023J06+ ATCAGGTTACCCATCGTGCNTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF020D04+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF009H15+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF050M22+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
JMFF034N12+ ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
                      ____________________________________________________________
consensus ATCAGGTTACCCATCGTGCCTGAAGGAACAAAAAGACCAGCTTCTTTGCCCATGATCTTT
 
. : . : . : . : . : . :
JMFF027L13+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF003J15+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF042J15+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF006A17+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF023B04+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF023J06+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF020D04+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF009H15+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF050M22+ GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
JMFF034N12+ GCGATTTCTGCTTCAAGTCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
                      ____________________________________________________________
consensus GCGATTTCTGCTTCAAGGCGTTGGGCTGTTGGGTCAAAACCCAACACGTCATCATCTACT
 
. : . : . : . : . : . :
JMFF027L13+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF003J15+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF042J15+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF006A17+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF023B04+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF023J06+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF020D04+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF009H15+ TCAGCACTTGCCATTGCAGCCCGAATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF050M22+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
JMFF034N12+ TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
                      ____________________________________________________________
consensus TCAGCACTTGCCATTGCAGCCCGCATGGCTTCTGTTGGTTTAGTAACTGTGTCAGAGCGG
 
. : . : . : . : . : . :
JMFF027L13+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF003J15+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF042J15+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF006A17+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF023B04+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF023J06+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF020D04+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF009H15+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF050M22+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
JMFF034N12+ AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
                      ____________________________________________________________
consensus AGATCCACAGTCCTTGTCACCATTTTCCTTCTTGAAAACCAAAGATGAAACTGAGATGAT
 
. : . : . : . : . : . :
JMFF027L13+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF003J15+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF042J15+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF006A17+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF023B04+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF023J06+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF020D04+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF009H15+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF050M22+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
JMFF034N12+ TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
                      ____________________________________________________________
consensus TGTTCTGTGCCCTTCCTAATGAGAAATGCAAAGCTCAAGAACCCTTCACCAGAACTGAAT
 
. : . : . : . : . : . :
JMFF027L13+ CAATTCACTCAGC
JMFF003J15+ CAATTCACTCAGC
JMFF042J15+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF006A17+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF023B04+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF023J06+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF020D04+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF009H15+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF050M22+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
JMFF034N12+ CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
                      ____________________________________________________________
consensus CAATTCACTCAGCTTTTCAGACCACCAAGAACGGTGGTTGGCTACTTGGCTCCTCTTCAA
 
. : . : . : . : . : . :
JMFF042J15+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTT
JMFF006A17+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTG
JMFF023B04+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTGAT
JMFF023J06+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTT
JMFF020D04+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTGAT
JMFF009H15+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTT
JMFF050M22+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTGAT
JMFF034N12+ TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTGAT
                      ____________________________________________________________
consensus TACTTCTCTCTCTCTCTCTCCCTCTCTGCAATTGAGTGTACTCTGCTATCTTTCTTTGAT