Contig 000812:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF031B17+                                                                      T
                      ____________________________________________________________
consensus                                                                        T
 
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JMFF031B17+           GGAGTTTTAGGCAANGAAAGCATTTCATTGGTAACCTTGCCAGCATGGTAGNGAAGAAAC
JMSF030B21+                                                                      C
                      ____________________________________________________________
consensus             GGAGTTTTAGGCAANGAAAGCATTTCATTGGTAACCTTGCCAGCATGGTAGNGAAGAAAC
 
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JMFF031B17+           AGGATAGAAGAGTATNCAATCACATNCCCGAACGTGGCGAGNTGAGCCAAGAAGAAGGGA
JMSF030B21+           AGGATAGAAGAGTATACAATCACATACCCGAACGTGGCGAGCTGAGCCAAGAAGAAGGGA
                      ____________________________________________________________
consensus             AGGATAGAAGAGTATACAATCACATACCCGAACGTGGCGAGCTGAGCCAAGAAGAAGGGA
 
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JMFF031B17+           TATTGTTTGAGTGGGACAAGAGCGAGCTTGTAGAGGACCCGATTACCAACGCCCAGGACC
JMSF030B21+           TATTGTTTGAGTGGGACAAGAGCGAGCTTGTAGAGGACCCGATTACCAACGCCCAGGACC
                      ____________________________________________________________
consensus             TATTGTTTGAGTGGGACAAGAGCGAGCTTGTAGAGGACCCGATTACCAACGCCCAGGACC
 
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JMFF031B17+           ACCGTAGCCGTTGCTGCGACCAAAACTTCCGCCNTTACGATTCCCACCGCCTTTCCCGCA
JMSF030B21+           ACCGTAGCCGTTGCTGCGACCAAAACTTCCGCC-CTACGATTCCCACCGCCTTTCCCGCA
                      ____________________________________________________________
consensus             ACCGTAGCCGTTGCTGCGACCAAAACTTCCGCCNTTACGATTCCCACCGCCTTTCCCGCA
 
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JMFF031B17+           ACTCTCAACCGAATCCTCCACTCCTTGGAGATCTCCAACCGCACACCAGCAACGCCTCTT
JMSF030B21+           ACTCTCAACCGAATCCTCCACTCCTTGGAGATCTCCAACCGCACACCAGGAACGCCTCTT
                      ____________________________________________________________
consensus             ACTCTCAACCGAATCCTCCACTCCTTGGAGATCTCCAACCGCACACCAGGAACGCCTCTT
 
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JMFF031B17+           ACGACTCCTCCTCACCTCTCCGAACTTCCCGTTCGCTCCCGCCGGCGTCGCGGCGGCCTC
JMSF030B21+           ACGACTCCTCCTCACCTCTCCGAACTTCCCGTTCGCTCCCGCCGGCGTCGCGGCGGCCTC
                      ____________________________________________________________
consensus             ACGACTCCTCCTCACCTCTCCGAACTTCCCGTTCGCTCCCGCCGGCGTCGCGGCGGCCTC
 
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JMFF031B17+           CACCGCCCATTGCCTCGTCGCCGTCGCTCTCAGAACGATTTCCGGCCGCCGCCGCCGCCC
JMSF030B21+           CACCGCCCATTGCCTCGTCGCCGTCGCTCTCAGAACGATTTCCGGCCGCCGCCGCCGCCC
                      ____________________________________________________________
consensus             CACCGCCCATTGCCTCGTCGCCGTCGCTCTCAGAACGATTTCCGGCCGCCGCCGCCGCCC
 
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JMFF031B17+           CTGCAGCAGCCACGGCGAGATAACGTGCTGGAATTCTGCTCCCCGCCTGCGTAGATGCAA
JMSF019L21+                                                          TGCGTAGATGCAA
JMSF030B21+           CTGCAGCAGCCACGGCGAGATAACGTGCTGGAATTCTGCTCCCCGCCTGCGTAGATGCAA
                      ____________________________________________________________
consensus             CTGCAGCAGCCACGGCGAGATAACGTGCTGGAATTCTGCTCCCCGCCTGCGTAGATGCAA
 
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JMFF031B17+           ATGACGGCTCCCTTCCGGCCCCGCCTGGGTTCCGATTGAGCCGCCGGTTATTGGGCGACT
JMSF019L21+           ATGACGGCTCCCTTCCGGCCCCGCCTGGGTTCCGATTGAGCCGCCGGTTATTGGGCGACT
JMSF030B21+           ATGACGGCTCCCTTCCGGCCCCGCCTGGGTTCCGATTGAGCCGCCGGTTATTGGGCGACT
                      ____________________________________________________________
consensus             ATGACGGCTCCCTTCCGGCCCCGCCTGGGTTCCGATTGAGCCGCCGGTTATTGGGCGACT
 
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JMFF031B17+           CCAAACCGTCATGTTTGCTCCTCCCCCCTCACTTTTGATCCTTAATTATTTCTACAAATA
JMSF019L21+           CCAAACCGTCATGTTTGCTCCTCCCCCCTCACTTTTGATCCTTAATTATTTCTACAAATA
JMSF030B21+           CCAAACCGTCATGTTTGCTCCTCCCCCCTCACTTTTGATCCTTAATTATTTCTACAAATA
                      ____________________________________________________________
consensus             CCAAACCGTCATGTTTGCTCCTCCCCCCTCACTTTTGATCCTTAATTATTTCTACAAATA
 
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JMFF031B17+           CTTCTGAACAAATTTCTGTCTAAGCTTCAAAATTGGAAGACGAT                
JMSF019L21+           CTTCTGAACAAATTTCTGTCTAAGCTTCAAAATTGGAAGACGATGAAAGTTGAAGAGGAT
JMSF030B21+           CTTCTGAACAAATTTCTGTCTAAGCTTCAAAATTGGAAGACGATGAAAGTTGAAGAGGAT
                      ____________________________________________________________
consensus             CTTCTGAACAAATTTCTGTCTAAGCTTCAAAATTGGAAGACGATGAAAGTTGAAGAGGAT
 
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JMSF019L21+           CGAACAGAGATATATAGTACTATACTACTATGTAGAGTGGGAGAGAGCAATTA       
JMSF030B21+           CGAACAGAGATATATAGTACTATACTACTATGTAGAGTGGGAGAGAGCAATTATGCTTTC
                      ____________________________________________________________
consensus             CGAACAGAGATATATAGTACTATACTACTATGTAGAGTGGGAGAGAGCAATTATGCTTTC