Contig 000192:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034A18Sequence483000192 (6)gb|KDO47061.1|1e-59hypothetical protein CISIN_1g014714mg [Citrus sinensis]758001162 (6)ref|XP_009630346.1|2e-81PREDICTED: diphosphomevalonate decarboxylase-like [Nicotiana tomentosiformis]
JMFF037M24Sequence585000192 (6)ref|XP_002521172.1|5e-80diphosphomevalonate decarboxylase, putative [Ricinus communis] gb|EEF41203.1| di722001162 (6)ref|XP_009630346.1|1e-81PREDICTED: diphosphomevalonate decarboxylase-like [Nicotiana tomentosiformis]
JMSF013F18Sequence504000192 (6)ref|XP_002521172.1|3e-77diphosphomevalonate decarboxylase, putative [Ricinus communis] gb|EEF41203.1| di777001162 (6)emb|CDO99902.1|9e-60unnamed protein product [Coffea canephora]
JMSF014D03Sequence316000192 (6)gb|KJB78631.1|3e-42hypothetical protein B456_013G012400 [Gossypium raimondii]787001162 (6)ref|XP_006361468.1|2e-115PREDICTED: diphosphomevalonate decarboxylase-like [Solanum tuberosum]
JMSF026F24Sequence636000192 (6)ref|XP_006367129.1|6e-74PREDICTED: diphosphomevalonate decarboxylase-like [Solanum tuberosum]749001162 (6)ref|XP_009630346.1|2e-67PREDICTED: diphosphomevalonate decarboxylase-like [Nicotiana tomentosiformis]
JMSF048J08Sequence378000192 (6)ref|XP_002315441.1|3e-64mevalonate disphosphate decarboxylase family protein [Populus trichocarpa] gb|E787001162 (6)emb|CDO99902.1|4e-58unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048J08+ CGTCCACTAGTTGAACAGCAAGACTATCACTTCC
                      ____________________________________________________________
consensus CGTCCACTAGTTGAACAGCAAGACTATCACTTCC
 
. : . : . : . : . : . :
JMSF048J08+ ATCCTCTTCTTTTCCCATGATCCACTTAACAAATCCTCCAAATAGACTTCGGCAAGCACT
                      ____________________________________________________________
consensus ATCCTCTTCTTTTCCCATGATCCACTTAACAAATCCTCCAAATAGACTTCGGCAAGCACT
 
. : . : . : . : . : . :
JMSF048J08+ GCCTGAACCTTGCCTTGCTATAGCAGAGAGTTGGCTATTATCTTCTTTCACATTCATTAG
                      ____________________________________________________________
consensus GCCTGAACCTTGCCTTGCTATAGCAGAGAGTTGGCTATTATCTTCTTTCACATTCATTAG
 
. : . : . : . : . : . :
JMSF048J08+ CTTTCCAAGGGCAAATACAAGGCAGGCAAAACCAGCAGCTGAAGAAGCCAAGCCTGCAGC
JMSF026F24+ CAAGGCAGGCAAAACCAGCAGCTGAAGAAGCCAAGCCTGCAGC
JMSF013F18+ CAAGGCAGGCAAAACCAGCAGCTGAAGAAGCCAAGCCTGCAGC
JMFF037M24+ CAAGGCAGGCAAAACCAGCAGCTGAAGAAGCCAAGCCTGCAGC
                      ____________________________________________________________
consensus CTTTCCAAGGGCAAATACAAGGCAGGCAAAACCAGCAGCTGAAGAAGCCAAGCCTGCAGC
 
. : . : . : . : . : . :
JMSF048J08+ AGTAGGGAAATTATTGTAAGAAGCGATATGCACATGCAGGTTCTCCCAATCCTTCTTTGT
JMSF026F24+ AGTAGGGAAATTATTGTAAGAAGCGATATGCACATGCAGGTTCTCCCAATCCTTCTTTGT
JMSF013F18+ AGTAGGGAAATTATTGTAAGAAGCGATATGCACATGCAGGTTCTCCCAATCCTTCTTTGT
JMFF037M24+ AGTAGGGAAATTATTGTAAGAAGCGATATGCACATGCAGGTTCTCCCAATCCTTCTTTGT
JMFF034A18+ TGT
                      ____________________________________________________________
consensus AGTAGGGAAATTATTGTAAGAAGCGATATGCACATGCAGGTTCTCCCAATCCTTCTTTGT
 
. : . : . : . : . : . :
JMSF048J08+ TATCTTGATACCCTTCTTCTCATCCTCAACATCACAAGCACGGGCTCGAATTTCTTTTAG
JMSF026F24+ TATCTTGATACCCTTCTTCTCATCCTCAACATCACAAGCACGGGCTCGAATTTCTTTTAG
JMSF013F18+ TATCTTGATACCCTTCTTCTCATCCTCAACATCACAAGCACGGGCTCGAATTTCTTTTAG
JMFF037M24+ TATCTTGATACCCTTCTTCTCATCCTCAACATCACAAGCACGGGCTCGAATTTCTTTTAG
JMFF034A18+ TATCTTGATACCCTTCTTCTCATCCTCAACATCACAAGCACGGGCTCGAATTTCTTTTAG
                      ____________________________________________________________
consensus TATCTTGATACCCTTCTTCTCATCCTCAACATCACAAGCACGGGCTCGAATTTCTTTTAG
 
. : . : . : . : . : . :
JMSF048J08+ ACAATTTTGGTATCTCACCCCAGAAAGTGACATTTCCTTCCCGT
JMSF026F24+ ACAATTTTGGTATCTCACCCCAGAAAGTGACATTTCCTTCCCGTTGAGCCACATGCGATC
JMSF013F18+ ACAATTTTGGTATCTCACCCCAGAAAGTGACATTTCCTTCCCGTTGAGCCACATGCGATC
JMFF037M24+ ACAATTTTGGTATCTCACCCCAGAAAGTGACATTTCCTTCCCGTTGAGCCACATGCGATC
JMSF014D03+ CTCACCCCAGAAAGTGACATTTCCTTCCCGTTGAGCCACATGCGATC
JMFF034A18+ ACAATTTTGGTATCTCACCCCAGAAAGTGACATTTCCTTCCCGTTGAGCCACATGCGATC
                      ____________________________________________________________
consensus ACAATTTTGGTATCTCACCCCAGAAAGTGACATTTCCTTCCCGTTGAGCCACATGCGATC
 
. : . : . : . : . : . :
JMSF026F24+ TTGGTCGAAAGCGGGGCTGACGGCGACGGTGGTGGTGGTGCAGAGGTGGGCAGGGTCAAG
JMSF013F18+ TTGGTCGAAAGCGGGGCTGACGGCGACGGTGGTGGTGGTGCAGAGGTGGGCAGGGTCAAG
JMFF037M24+ TTGGTCGAAAGCGGGGCTGACGGCGACGGTGGTGGTGGTGCAGAGGTGGGCAGGGTCAAG
JMSF014D03+ TTGGTCGAAAGCGGGGCTGACGGCGACGGTGGTGGTGGTGCAGAGGTGGGCAGGGTCAAG
JMFF034A18+ TTGGTCGAAAGCGGGGCTGACGGCGACGGTGGTGGTGGTGCAGAGGTGGGCAGGGTCAAG
                      ____________________________________________________________
consensus TTGGTCGAAAGCGGGGCTGACGGCGACGGTGGTGGTGGTGCAGAGGTGGGCAGGGTCAAG
 
. : . : . : . : . : . :
JMSF026F24+ GGTGACGCTGATGCTGTCATTGATGGGGAGGATGAGGGTCTCGTCCCTCTTCCCCCAGTA
JMSF013F18+ GGTGACGCTGATGCTGTCATTGATGGGGAGGATGAGGGTCTCGTCCCTCTTCCCCCAGTA
JMFF037M24+ GGTGACGCTGATGCTGTCATTGATGGGGAGGATGAGGGTCTCGTCCCTCTTCCCCCAGTA
JMSF014D03+ GGTGACGCTGATGCTGTCATTGATGGGGAGGATGAGGGTCTCGTCCCTCTTCCCCCAGTA
JMFF034A18+ GGTGACGCTGATGCTGTCATTGATGGGGAGGATGAGGGTCTCGTCCCTCTTCCCCCAGTA
                      ____________________________________________________________
consensus GGTGACGCTGATGCTGTCATTGATGGGGAGGATGAGGGTCTCGTCCCTCTTCCCCCAGTA
 
. : . : . : . : . : . :
JMSF026F24+ CTTTATCACCGCTATGTTCGTCGGCGTCTGCGCCGTCACCATTAGCACCCATTTCTCCGC
JMSF013F18+ CTTTATCACCGCTATGTTCGTCGGCGTCTGCGCCGTCACCATTAGCACCCATTTCTCCGC
JMFF037M24+ CTTTATCACCGCTATGTTCGTCGGCGTCTGCGCCGTCACCATTAGCACCCATTTCTCCGC
JMSF014D03+ CTTTATCACCGCTATGTTCGTCGGCGTCTGCGCCGTCACCATTAGCACCCATTTCTCCGC
JMFF034A18+ CTTTATCACCGCTATGTTCGTCGGCGTCTGCGCCGTCACCATTAGCACCCATTTCTCCGC
                      ____________________________________________________________
consensus CTTTATCACCGCTATGTTCGTCGGCGTCTGCGCCGTCACCATTAGCACCCATTTCTCCGC
 
. : . : . : . : . : . :
JMSF026F24+ CATGGTCCCCGGAAAAGGAAAAGAAAAGAAAAGCAGGCGTTGTTGACTGCAAAGACTATT
JMSF013F18+ CATGGTCCCCGGAAAAGGAAAAGAAAAGAAAAGCAGGCGTTGTTGACTGCAAAGACTATT
JMFF037M24+ CATGGTCCCCGGAAAAGGAAAAGAAAAGAAAAGCAGGCGTTGTTGACTGCAAAGACTATT
JMSF014D03+ CATGGTCCCCGGAAAAGGAAAAGAAAAGAAAAGCAGGCGTTGTTGACTGCAAAGACTATT
JMFF034A18+ CATGGTCCCCGGAAAAGGAAAAGAAAAGAAAAGCAGGCGTTGTTGACTGCAAAGACTATT
                      ____________________________________________________________
consensus CATGGTCCCCGGAAAAGGAAAAGAAAAGAAAAGCAGGCGTTGTTGACTGCAAAGACTATT
 
. : . : . : . : . : . :
JMSF026F24+ GATGGAAACAGGGAGCGAGCGTG
JMSF013F18+ GATGGAAACAGGGAGCGAGCGTGAGTGT
JMFF037M24+ GATGGAAACAGGGAGCGAGCGTGAGTGTACAAGTGAGATCAGATCTTTACAGTTATATAA
JMSF014D03+ GATGGAAACAGGGAGCGAGCGTGAGTGT
JMFF034A18+ GATGGAAACAGGGAGCGAGCGTGAGTGTACAAGTGAGATCAGATCTTTACAGTTATATAA
                      ____________________________________________________________
consensus GATGGAAACAGGGAGCGAGCGTGAGTGTACAAGTGAGATCAGATCTTTACAGTTATATAA
 
. : . : . : . : . : . :
JMFF037M24+ GCATTTTTTGCGTGCGTCTGCTGAATGTAAC
JMFF034A18+ GCATTTTTTGCGTGCGTCTGCTGAATGTAACAACTATGCGATGGCGGCTAGTATTATTAT
                      ____________________________________________________________
consensus GCATTTTTTGCGTGCGTCTGCTGAATGTAACAACTATGCGATGGCGGCTAGTATTATTAT