List of clones in pair P018684.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009J03Sequence604000579 (55)emb|CDP16234.1|2e-84unnamed protein product [Coffea canephora]572000579 (55)gb|AAZ39884.1|5e-75fatty acid hydroperoxide lyase [Nicotiana tabacum]
JMFF012P10Sequence481000579 (55)ref|NP_001234420.1|2e-71fatty acid hydroperoxide lyase [Solanum lycopersicum] gb|AAF67142.1|AF230372_1 f790000579 (55)gb|AAZ39884.1|2e-131fatty acid hydroperoxide lyase [Nicotiana tabacum]
JMFF012P21Sequence477000579 (55)ref|NP_001234420.1|1e-69fatty acid hydroperoxide lyase [Solanum lycopersicum] gb|AAF67142.1|AF230372_1 f564000579 (55)gb|AAZ39884.1|9e-95fatty acid hydroperoxide lyase [Nicotiana tabacum]
JMFF013I23Sequence492000579 (55)emb|CDP16234.1|5e-65unnamed protein product [Coffea canephora]735000579 (55)gb|AAZ39884.1|3e-112fatty acid hydroperoxide lyase [Nicotiana tabacum]
JMFF019M21Sequence568000579 (55)ref|XP_009793535.1|1e-78PREDICTED: allene oxide synthase-like [Nicotiana sylvestris]690000579 (55)gb|AAZ39884.1|1e-105fatty acid hydroperoxide lyase [Nicotiana tabacum]
JMFF019P10Sequence583000579 (55)emb|CDP16234.1|3e-75unnamed protein product [Coffea canephora]
JMFF024M09Sequence568000579 (55)ref|XP_009793535.1|1e-78PREDICTED: allene oxide synthase-like [Nicotiana sylvestris]807000579 (55)ref|NP_001234420.1|1e-127fatty acid hydroperoxide lyase [Solanum lycopersicum] gb|AAF67142.1|AF230372_1 f
JMFF029M20Sequence499000579 (55)emb|CDP16234.1|2e-66unnamed protein product [Coffea canephora]756000579 (55)ref|NP_001234420.1|7e-128fatty acid hydroperoxide lyase [Solanum lycopersicum] gb|AAF67142.1|AF230372_1 f
JMFF033M16Sequence560000579 (55)ref|XP_009619723.1|9e-78PREDICTED: allene oxide synthase [Nicotiana tomentosiformis]682000579 (55)ref|XP_009619723.1|2e-105PREDICTED: allene oxide synthase [Nicotiana tomentosiformis]
JMFF034G08Sequence612000579 (55)emb|CDP16234.1|8e-86unnamed protein product [Coffea canephora]752000579 (55)ref|NP_001234420.1|7e-128fatty acid hydroperoxide lyase [Solanum lycopersicum] gb|AAF67142.1|AF230372_1 f
JMFF037F15Sequence585000579 (55)emb|CDP16234.1|4e-62unnamed protein product [Coffea canephora]792000579 (55)ref|XP_009619723.1|3e-125PREDICTED: allene oxide synthase [Nicotiana tomentosiformis]
JMFF038O24Sequence534000579 (55)ref|NP_001234420.1|2e-88fatty acid hydroperoxide lyase [Solanum lycopersicum] gb|AAF67142.1|AF230372_1 f747000579 (55)ref|NP_001234420.1|6e-110fatty acid hydroperoxide lyase [Solanum lycopersicum] gb|AAF67142.1|AF230372_1 f
JMFF045L10Sequence647000579 (55)emb|CDP16234.1|3e-84unnamed protein product [Coffea canephora]603000579 (55)ref|XP_009619723.1|8e-74PREDICTED: allene oxide synthase [Nicotiana tomentosiformis]
JMFF047O19Sequence525000579 (55)emb|CDP16234.1|1e-70unnamed protein product [Coffea canephora]404000579 (55)gb|AAZ39884.1|5e-39fatty acid hydroperoxide lyase [Nicotiana tabacum]
JMFF049B11Sequence634000579 (55)emb|CDP16234.1|2e-84unnamed protein product [Coffea canephora]646000579 (55)ref|XP_009619723.1|7e-85PREDICTED: allene oxide synthase [Nicotiana tomentosiformis]
JMFS063D01Sequence611000579 (55)gb|AAZ39884.1|7e-120fatty acid hydroperoxide lyase [Nicotiana tabacum]
JMFS067H10Sequence269000579 (55)gb|AAZ39884.1|4e-18fatty acid hydroperoxide lyase [Nicotiana tabacum]
JMFS074E08Sequence609000579 (55)ref|XP_009619723.1|4e-93PREDICTED: allene oxide synthase [Nicotiana tomentosiformis]
JMSF002N14Sequence356000579 (55)emb|CDP16234.1|8e-35unnamed protein product [Coffea canephora]720000579 (55)ref|XP_009619723.1|2e-123PREDICTED: allene oxide synthase [Nicotiana tomentosiformis]
JMSF004H13Sequence443000579 (55)gb|KDO39714.1|9e-53hypothetical protein CISIN_1g0437041mg, partial [Citrus sinensis]549000579 (55)gb|AAZ39884.1|1e-93fatty acid hydroperoxide lyase [Nicotiana tabacum]
JMSF026H17Sequence662000579 (55)emb|CDP16234.1|1e-93unnamed protein product [Coffea canephora]735000579 (55)ref|NP_001234420.1|1e-127fatty acid hydroperoxide lyase [Solanum lycopersicum] gb|AAF67142.1|AF230372_1 f
JMSF029P05Sequence620000579 (55)gb|AIL29216.1|6e-96fatty acid hydroperoxide lyase [Camellia oleifera]716000579 (55)ref|NP_001234420.1|8e-118fatty acid hydroperoxide lyase [Solanum lycopersicum] gb|AAF67142.1|AF230372_1 f
JMSF038P04Sequence682000579 (55)gb|AIL29216.1|3e-95fatty acid hydroperoxide lyase [Camellia oleifera]857000579 (55)ref|XP_009619723.1|4e-141PREDICTED: allene oxide synthase [Nicotiana tomentosiformis]
JMSF041M11Sequence828000579 (55)ref|XP_009793535.1|8e-121PREDICTED: allene oxide synthase-like [Nicotiana sylvestris]584000579 (55)gb|AAZ39884.1|2e-92fatty acid hydroperoxide lyase [Nicotiana tabacum]
JMSF045F16Sequence786000579 (55)emb|CDP16234.1|5e-90unnamed protein product [Coffea canephora]747000579 (55)gb|AAZ39884.1|3e-123fatty acid hydroperoxide lyase [Nicotiana tabacum]
JMSF045O16Sequence681000579 (55)gb|AIL29216.1|4e-95fatty acid hydroperoxide lyase [Camellia oleifera]576000579 (55)ref|XP_009619723.1|5e-96PREDICTED: allene oxide synthase [Nicotiana tomentosiformis]
JMSF048E22Sequence680000579 (55)gb|AIL29216.1|3e-95fatty acid hydroperoxide lyase [Camellia oleifera]759000579 (55)ref|XP_009619723.1|3e-121PREDICTED: allene oxide synthase [Nicotiana tomentosiformis]
JMSF048F11Sequence682000579 (55)gb|AIL29216.1|9e-95fatty acid hydroperoxide lyase [Camellia oleifera]773000579 (55)ref|NP_001234420.1|9e-128fatty acid hydroperoxide lyase [Solanum lycopersicum] gb|AAF67142.1|AF230372_1 f

Contig 579 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000579============================================1694         
   2 ------------------------------------->JMFF049B11                                                                 
                                                                   <-------------------------------------rJMFF049B11  
  21 ------------------------------------->JMFF045L10                                                                 
                                                                    <-----------------------------------rJMFF045L10  
  28 ------------------------------>JMFF047O19                                                                        
                                                                                <-----------------------rJMFF047O19  
  45 ---------------------------->JMFF013I23                                                                          
                                                            <------------------------------------------rJMFF013I23  
  49 --------------------------------->JMFF019M21                                                                     
                                                             <----------------------------------------rJMFF019M21  
  50 -------------------------------->JMFF033M16                                                                      
                                                              <---------------------------------------rJMFF033M16  
  50 --------------------------------->JMFF024M09                                                                     
                                                      <-----------------------------------------------rJMFF024M09  
  51 ---------------------------------->JMFF037F15                                                                    
                                                       <----------------------------------------------rJMFF037F15  
  63 ----------------------------------->JMFF009J03                                                                   
                                                                      <-------------------------------rJMFF009J03  
  70 --------------------------------------->JMSF048E22                                                               
                                                        <--------------------------------------------rJMSF048E22  
  84 --------------------------------------->JMSF048F11                                                               
                                                      <---------------------------------------------rJMSF048F11  
  88 --------------------------------------->JMSF038P04                                                               
                                                  <-------------------------------------------------rJMSF038P04  
  94 ------------------------------------------------>JMSF041M11                                                      
                                                                 <----------------------------------rJMSF041M11  
  98 ---------------------------------------------->JMSF045F16                                                        
                                                        <-------------------------------------------rJMSF045F16  
 104 ----------------------------->JMFF029M20                                                                         
                                                      <--------------------------------------------rJMFF029M20  
 104 ----------------------------------->JMFF034G08                                                                   
                                                      <--------------------------------------------rJMFF034G08  
 120 --------------------------------------->JMSF045O16                                                               
                                                                <---------------------------------rJMSF045O16  
 124 -------------------------------------->JMSF026H17                                                                
                                                      <-------------------------------------------rJMSF026H17  
 133 ------------------------->JMSF004H13                                                                             
                                                                 <--------------------------------rJMSF004H13  
 146     ------------------------------------>JMSF029P05                                                              
                                                          <-----------------------------------------rJMSF029P05  
 159 -------------------->JMSF002N14                                                                                  
                                                     <------------------------------------------rJMSF002N14  
 627                                 ---------------------------->JMFF012P10                                          
                                                     <----------------------------------------------rJMFF012P10  
 697                                 --------------------------->JMFF012P21                                           
                                                               <--------------------------------rJMFF012P21  
1022                                      <-------------------------------JMFF038O24                                  
                                  --------------------------------------->rJMFF038O24

The following clones don't have the opposite end in this pair.

     ---------------------------------->JMFF019P10-                                                                   
                                                         <----------------------------------------rJMSF029O03*        
                                                                                     --------------->JMFS067H10-      
                                                                 ---------------------------------->JMFS074E08-       
                                                           ----------------------------------->JMFS063D01-            
                                                      <--------------------------------------------rJMFF017E21#       
                                                              <-------------------------------------rJMFF004A01*