clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN005D24 | Sequence | 624 | 000796 (16) | ref|XP_006359514.1| | 4e-51 | PREDICTED: uncharacterized serine-rich protein C215.13-like [Solanum tuberosum] | |||||
JMSF008B13 | Sequence | 248 | 000796 (16) | ref|XP_004251739.1| | 44.7 | PREDICTED: uncharacterized protein LOC101264293 [Solanum lycopersicum] | 460 | 000796 (16) | ref|XP_010648721.1| | 63.9 | PREDICTED: uncharacterized protein LOC100266438 [Vitis vinifera] |
JMSF016J20 | Sequence | 500 | 000796 (16) | ref|XP_006359514.1| | 2e-26 | PREDICTED: uncharacterized serine-rich protein C215.13-like [Solanum tuberosum] | 386 | 000796 (16) | |||
JMSF018J15 | Sequence | 518 | 000796 (16) | ref|XP_006359514.1| | 6e-29 | PREDICTED: uncharacterized serine-rich protein C215.13-like [Solanum tuberosum] | 530 | 000796 (16) | |||
JMSF022O07 | Sequence | 688 | 000796 (16) | emb|CDP10497.1| | 3e-56 | unnamed protein product [Coffea canephora] | 535 | 000796 (16) | ref|XP_009602281.1| | 71.6 | PREDICTED: uncharacterized protein LOC104097433 [Nicotiana tomentosiformis] |
JMSF022O08 | Sequence | 683 | 000796 (16) | emb|CDP10497.1| | 1e-54 | unnamed protein product [Coffea canephora] | 773 | 000796 (16) | emb|CDP10497.1| | 2e-60 | unnamed protein product [Coffea canephora] |
JMSF028I14 | Sequence | 621 | 000796 (16) | ref|XP_006359514.1| | 8e-41 | PREDICTED: uncharacterized serine-rich protein C215.13-like [Solanum tuberosum] | 736 | 000796 (16) | emb|CDP10497.1| | 1e-57 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000796============================================1364 43 ------------------------------------>JMSF016J20 <-------------------------rJMSF016J20 45 ------------------------------------->JMSF018J15 <-------------------------rJMSF018J15 362 ----------------->JMSF008B13 <--------------------------------rJMSF008B13 362 ------------------------------------------------->JMSF022O07 <--------------------------------------rJMSF022O07 456 --------------------------------------------->JMSF028I14 <-----------------------------------------------------rJMSF028I14 458 ------------------------------------------------->JMSF022O08 <--------------------------------------------------------rJMSF022O08
The following clones don't have the opposite end in this pair.
<-------------------------------------------rJMSF041G06* -------------------------------------------->JMSF028F22* --------------------------------------------->JMFN005D24- ---------------->JMSF005B12#