clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003I01 | Sequence | 491 | 011529 (12) | ref|XP_009799351.1| | 2e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | 467 | 011529 (12) | ref|XP_009799351.1| | 1e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] |
JMFF011F23 | Sequence | 416 | 011529 (12) | ref|XP_009799351.1| | 9e-20 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
JMFF019H21 | Sequence | 496 | 011529 (12) | ref|XP_009799351.1| | 2e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | 471 | 011529 (12) | ref|XP_009799351.1| | 2e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] |
JMFN003E13 | Sequence | 486 | 011529 (12) | ref|XP_009799351.1| | 2e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
JMFN013P24 | Sequence | 535 | 011529 (12) | ref|XP_009799351.1| | 3e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
JMFN042O03 | Sequence | 484 | 011529 (12) | ref|XP_009799351.1| | 2e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
JMFN044B17 | Sequence | 510 | 011529 (12) | ref|XP_009799351.1| | 7e-18 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
JMFN044E08 | Sequence | 289 | 011529 (12) | gb|AEW24432.1| | 5e-07 | late embryogenesis abundant protein 3L-1 [Camellia sinensis] | |||||
JMFS023E11 | Sequence | 485 | 011529 (12) | ref|XP_009799351.1| | 2e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] | |||||
JMFS134D04 | Sequence | 497 | 011529 (12) | ref|XP_009799351.1| | 2e-19 | PREDICTED: late embryogenesis abundant protein Lea5-like [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011529============================================ 573 103 ------------------------------------------------------------------------------------>JMFF019H21 <--------------------------------------------------------------------------------rJMFF019H21 120 ----------------------------------------------------------------------------------->JMFF003I01 <------------------------------------------------------------------------------rJMFF003I01
The following clones don't have the opposite end in this pair.
----------------------------------------------------------------------------------->JMFN042O03- ---------------------------------------------------------------------------------------->JMFN044B17- -------------------------------------------------------------------------------------->JMFS134D04- ----------------------------------------------------------------------->JMFF011F23- ------------------------------------------------->JMFN044E08- ------------------------------------------------------------------------------------>JMFN003E13- ------------------------------------------------------------------------------------>JMFS023E11- -------------------------------------------------------------------------------------------->JMFN013P24-