clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005E17 | Sequence | 541 | 005031 (8) | ref|XP_006444361.1| | 3e-47 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P | |||||
JMFF027B03 | Sequence | 586 | 005031 (8) | ref|XP_006444361.1| | 5e-47 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P | 555 | 005031 (8) | ref|XP_006444361.1| | 4e-47 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P |
JMFN042L20 | Sequence | 390 | 005031 (8) | ref|XP_006444361.1| | 4e-46 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P | |||||
JMSF016F02 | Sequence | 286 | 005031 (8) | ref|XP_009597499.1| | 3e-28 | PREDICTED: 60S ribosomal protein L22-3-like [Nicotiana tomentosiformis] | 614 | 005031 (8) | ref|XP_006444361.1| | 6e-47 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P |
JMSF017F02 | Sequence | 286 | 005031 (8) | ref|XP_009597499.1| | 3e-28 | PREDICTED: 60S ribosomal protein L22-3-like [Nicotiana tomentosiformis] | 565 | 005031 (8) | ref|XP_006444361.1| | 3e-47 | hypothetical protein CICLE_v10022870mg [Citrus clementina] ref|XP_006479970.1| P |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005031============================================ 567 2 ------------------------------------------------->JMSF017F02 <---------------------------------------------------------------------------------------------------rJMSF017F02 13 ---------------------------------------------------------------------------->JMFF027B03 <-------------------------------------------------------------------------------------------------rJMFF027B03 120 ------------------------------------------------->JMSF016F02 <------------------------------------------------------------------------------rJMSF016F02
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------------->JMFN042L20- ---------------------------------------------------------------------------------------------->JMFF005E17-