clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF010L10 | Sequence | 554 | 000869 (19) | ref|XP_010035085.1| | 4e-99 | PREDICTED: sorbitol dehydrogenase [Eucalyptus grandis] gb|KCW46372.1| hypothetic | 724 | 000869 (19) | ref|XP_009802536.1| | 2e-95 | PREDICTED: sorbitol dehydrogenase [Nicotiana sylvestris] |
JMFF017N11 | Sequence | 564 | 000869 (19) | ref|XP_010035085.1| | 3e-109 | PREDICTED: sorbitol dehydrogenase [Eucalyptus grandis] gb|KCW46372.1| hypothetic | 759 | 000869 (19) | ref|XP_009802536.1| | 2e-122 | PREDICTED: sorbitol dehydrogenase [Nicotiana sylvestris] |
JMFF033C21 | Sequence | 496 | 000869 (19) | ref|XP_010035085.1| | 7e-93 | PREDICTED: sorbitol dehydrogenase [Eucalyptus grandis] gb|KCW46372.1| hypothetic | 705 | 000869 (19) | ref|XP_009802536.1| | 1e-121 | PREDICTED: sorbitol dehydrogenase [Nicotiana sylvestris] |
JMFF043H10 | Sequence | 641 | 000869 (19) | ref|XP_010106805.1| | 7e-134 | L-idonate 5-dehydrogenase [Morus notabilis] gb|EXC11890.1| L-idonate 5-dehydroge | 583 | 000869 (19) | ref|XP_009802536.1| | 3e-95 | PREDICTED: sorbitol dehydrogenase [Nicotiana sylvestris] |
JMFS032G11 | Sequence | 614 | 000869 (19) | ref|XP_009802536.1| | 2e-73 | PREDICTED: sorbitol dehydrogenase [Nicotiana sylvestris] | |||||
JMFS032H03 | Sequence | 472 | 000869 (19) | ref|XP_009802536.1| | 1e-44 | PREDICTED: sorbitol dehydrogenase [Nicotiana sylvestris] | |||||
JMFS075E12 | Sequence | 616 | 000869 (19) | ref|XP_011030046.1| | 1e-129 | PREDICTED: sorbitol dehydrogenase [Populus euphratica] | |||||
JMSF001C03 | Sequence | 254 | 000869 (19) | ref|XP_006857934.1| | 2e-32 | hypothetical protein AMTR_s00069p00154200 [Amborella trichopoda] gb|ERN19401.1| | 788 | 000869 (19) | ref|XP_009802536.1| | 8e-106 | PREDICTED: sorbitol dehydrogenase [Nicotiana sylvestris] |
JMSF036B17 | Sequence | 668 | 000869 (19) | ref|XP_011030046.1| | 4e-134 | PREDICTED: sorbitol dehydrogenase [Populus euphratica] | 712 | 000869 (19) | ref|XP_009802536.1| | 5e-92 | PREDICTED: sorbitol dehydrogenase [Nicotiana sylvestris] |
JMSF051C15 | Sequence | 665 | 000869 (19) | ref|XP_011030046.1| | 1e-133 | PREDICTED: sorbitol dehydrogenase [Populus euphratica] | 787 | 000869 (19) | ref|XP_009802536.1| | 2e-113 | PREDICTED: sorbitol dehydrogenase [Nicotiana sylvestris] |
JMSF053M19 | Sequence | 571 | 000869 (19) | ref|XP_011030046.1| | 4e-83 | PREDICTED: sorbitol dehydrogenase [Populus euphratica] | 763 | 000869 (19) | ref|XP_009802536.1| | 1e-127 | PREDICTED: sorbitol dehydrogenase [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000869============================================1357 23 ---------------------------------------->JMFF010L10 <------------------------------------------------------rJMFF010L10 24 ------------------------------------------------>JMSF036B17 <----------------------------------------------------rJMSF036B17 30 ------------------------------------------------>JMSF051C15 <----------------------------------------------------------rJMSF051C15 41 ------------------>JMSF001C03 <---------------------------------------------------------rJMSF001C03 84 ----------------------------------------->JMFF017N11 <--------------------------------------------------------rJMFF017N11 101 ----------------------------------------->JMSF053M19 <---------------------------------------------------------rJMSF053M19 152 ------------------------------------>JMFF033C21 <---------------------------------------------------rJMFF033C21 248 ----------------------------------------------->JMFF043H10 <-------------------------------------------rJMFF043H10
The following clones don't have the opposite end in this pair.
---------------------------------->JMFS032H03- --------------------------------------------->JMFS075E12- --------------------------------------------->JMFS032G11-