List of clones in pair P018439.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP005G08Sequence626002345 (43)gb|KJB83793.1|3e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMCP017E07Sequence626002345 (43)gb|KJB83793.1|2e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMCP018C01Sequence238002345 (43)
JMFF032G01Sequence504002345 (43)gb|KJB83793.1|2e-61hypothetical protein B456_013G264900 [Gossypium raimondii]585002345 (43)gb|KJB83793.1|6e-61hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFF050H01Sequence616002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]585002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN003C16Sequence563002345 (43)gb|KJB83793.1|8e-61hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN003D13Sequence555002345 (43)gb|KJB83793.1|7e-61hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN003K21Sequence532002345 (43)gb|KJB83793.1|5e-61hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN003M12Sequence626002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN003O21Sequence621002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN004F02Sequence570002345 (43)ref|XP_011101532.1|3e-58PREDICTED: histone H2B-like [Sesamum indicum]
JMFN004J21Sequence580002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN005C07Sequence446002345 (43)gb|KJB83793.1|1e-62hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN005E01Sequence446002345 (43)gb|KJB83793.1|1e-62hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN005L24Sequence624002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN005M09Sequence626002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN007N03Sequence619002345 (43)gb|KJB83793.1|4e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN007O02Sequence594002345 (43)gb|KJB83793.1|6e-61hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN010N22Sequence636002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN013K06Sequence628002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN014I17Sequence590002345 (43)gb|KJB83793.1|9e-61hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN014N03Sequence609002345 (43)gb|KJB83793.1|8e-61hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN016O12Sequence619002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN028D20Sequence495002345 (43)gb|KJB83793.1|3e-57hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN029C07Sequence620002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN031K03Sequence601002345 (43)gb|KJB83793.1|9e-61hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN031O13Sequence626002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN033K16Sequence655002345 (43)gb|KJB83793.1|2e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN034L18Sequence587002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN034M09Sequence620002345 (43)ref|XP_010267292.1|1e-56PREDICTED: histone H2B.3-like [Nelumbo nucifera]
JMFN036C22Sequence620002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN038H06Sequence624002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN038J03Sequence614002345 (43)gb|KJB83793.1|4e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFN039C10Sequence619002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFS121G06Sequence589002345 (43)gb|KJB83793.1|9e-61hypothetical protein B456_013G264900 [Gossypium raimondii]
JMFS169G05Sequence627002345 (43)gb|KJB83793.1|5e-59hypothetical protein B456_013G264900 [Gossypium raimondii]
JMSF013M02Sequence254002345 (43)625002345 (43)gb|KJB83793.1|9e-61hypothetical protein B456_013G264900 [Gossypium raimondii]
JMSF034I05Sequence666002345 (43)gb|KJB83793.1|2e-60hypothetical protein B456_013G264900 [Gossypium raimondii]627002345 (43)gb|KJB83793.1|1e-60hypothetical protein B456_013G264900 [Gossypium raimondii]

Contig 2345 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002345============================================ 706         
  48   -------------------------------------------------------------------------------------->JMFF050H01              
                 <----------------------------------------------------------------------------------rJMFF050H01  
  81 ----------------------------------->JMSF013M02                                                                   
     <----------------------------------------------------------------------------------------rJMSF013M02  
  89 --------------------------------------------------------------------------------------------->JMSF034I05         
     <--------------------------------------------------------------------------------------rJMSF034I05  
 130          ----------------------------------------------------------------------->JMFF032G01                      
              <---------------------------------------------------------------------------------rJMFF032G01

The following clones don't have the opposite end in this pair.

        --------------------------------------------------------------------------------------->JMFN036C22-           
                     ------------------------------------------------------------------------------->JMFN003C16-      
        ---------------------------------------------------------------------------------------->JMFS169G05-          
                     ------------------------------------------------------------------------------->JMFN004F02-      
        ---------------------------------------------------------------------------------------->JMFN034M09-          
        --------------------------------------------------------------------->JMFN028D20-                             
         --------------------------------------------------------------------------------------->JMFN039C10-          
        ---------------------------------------------------------------------------------------->JMFN038H06-          
         ----------------------------------------------------------------------------------->JMFN014I17-              
                                     -------------------------------------------------------------->JMFN005C07-       
       --------------------------------------------------------------------------------------->JMFN003O21-            
              ----------------------------------------------------------------------------------->JMFN007O02-         
              ------------------------------------------------------------------------------------->JMFN014N03-       
                      <----------------------------------------------------------------------------------JMFN034L18-  
        --------------------------------------------------------------------------------------->JMFN007N03-           
         ---------------------------------------------------------------------------------------->JMCP017E07-         
         -------------------------------------------------------------------------------------->JMFN038J03-           
        -------------------------------------------------------------------------------------------->JMFN033K16-      
        ----------------------------------------------------------------------------------------->JMFN010N22-         
                       ----------------------------------------------------------------------------->JMFN003D13-      
        ---------------------------------------------------------------------------------------->JMFN003M12-          
      <-------------------------------------------------------------------------------------rJMSF036B05*              
       ------------------------------------------------------------------------------------>JMFN031K03-               
                  --------------------------------------------------------------------------------->JMFN004J21-       
       ---------------------------------------------------------------------------------------->JMFN031O13-           
        --------------------------------------------------------------------------------------->JMFN016O12-           
        ---------------------------------------------------------------------------------------->JMFN005L24-          
        ---------------------------------------------------------------------------------------->JMFN013K06-          
                                     -------------------------------------------------------------->JMFN005E01-       
        ---------------------------------------------------------------------------------------->JMFN005M09-          
                        -------------------------------------------------------------------------->JMFN003K21-        
        --------------------------------------------------------------------------------------->JMFN029C07-           
        --------------------------------->rJMCP018C01-                                                                
        ----------------------------------------------------------------------------------->JMFS121G06-               
        ---------------------------------------------------------------------------------------->rJMCP005G08-