List of clones in pair P018409.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003H10Sequence610012936 (36)ref|XP_009769268.1|1e-57PREDICTED: pectinesterase-like [Nicotiana sylvestris]700012936 (36)emb|CAA96436.1|2e-111pectin methylesterase [Nicotiana plumbaginifolia]
JMFF009P17Sequence616012936 (36)ref|XP_009769268.1|1e-58PREDICTED: pectinesterase-like [Nicotiana sylvestris]659012936 (36)emb|CAA96436.1|3e-92pectin methylesterase [Nicotiana plumbaginifolia]
JMFF017D22Sequence607012936 (36)ref|XP_009769268.1|1e-56PREDICTED: pectinesterase-like [Nicotiana sylvestris]642012936 (36)emb|CAA96436.1|2e-92pectin methylesterase [Nicotiana plumbaginifolia]
JMFF019I08Sequence482012936 (36)ref|XP_006467993.1|6e-58PREDICTED: pectinesterase/pectinesterase inhibitor-like [Citrus sinensis]454012936 (36)ref|XP_006467993.1|4e-58PREDICTED: pectinesterase/pectinesterase inhibitor-like [Citrus sinensis]
JMFF020D02Sequence567012936 (36)ref|XP_009769268.1|2e-51PREDICTED: pectinesterase-like [Nicotiana sylvestris]
JMFF023C01Sequence462012936 (36)ref|XP_009769268.1|7e-32PREDICTED: pectinesterase-like [Nicotiana sylvestris]689012936 (36)emb|CAA96436.1|7e-109pectin methylesterase [Nicotiana plumbaginifolia]
JMFF028B24Sequence542012936 (36)ref|XP_009769268.1|7e-45PREDICTED: pectinesterase-like [Nicotiana sylvestris]
JMFF031E10Sequence613012936 (36)ref|XP_009769268.1|2e-58PREDICTED: pectinesterase-like [Nicotiana sylvestris]617012936 (36)emb|CAA96436.1|7e-81pectin methylesterase [Nicotiana plumbaginifolia]
JMFF032O07Sequence558012936 (36)ref|XP_009769268.1|1e-48PREDICTED: pectinesterase-like [Nicotiana sylvestris]
JMFF037O17Sequence621012936 (36)ref|XP_009769268.1|1e-57PREDICTED: pectinesterase-like [Nicotiana sylvestris]705012936 (36)emb|CAA96434.1|5e-123pectin methylesterase [Nicotiana plumbaginifolia]
JMFF044A13Sequence638012936 (36)ref|XP_009769268.1|4e-61PREDICTED: pectinesterase-like [Nicotiana sylvestris]543012936 (36)emb|CAA96436.1|4e-88pectin methylesterase [Nicotiana plumbaginifolia]
JMFF048C10Sequence299012936 (36)ref|XP_009769268.1|6e-17PREDICTED: pectinesterase-like [Nicotiana sylvestris]189012936 (36)
JMFF048O21Sequence500012936 (36)ref|XP_009769268.1|9e-41PREDICTED: pectinesterase-like [Nicotiana sylvestris]207012936 (36)
JMFN007C16Sequence270012936 (36)emb|CDO99718.1|8e-15unnamed protein product [Coffea canephora]
JMFN039J05Sequence624012936 (36)emb|CAA96434.1|1e-123pectin methylesterase [Nicotiana plumbaginifolia]
JMFS013F10Sequence601012936 (36)ref|XP_009769268.1|4e-60PREDICTED: pectinesterase-like [Nicotiana sylvestris]
JMFS035B12Sequence285012936 (36)ref|XP_002518523.1|4e-22Pectinesterase precursor, putative [Ricinus communis] gb|EEF43910.1| Pectinester
JMFS064A10Sequence624012936 (36)ref|XP_009589755.1|3e-68PREDICTED: pectinesterase-like [Nicotiana tomentosiformis]
JMFS067G05Sequence630012936 (36)ref|XP_009769268.1|1e-58PREDICTED: pectinesterase-like [Nicotiana sylvestris]
JMFS071D08Sequence613012936 (36)gb|AFK35109.1|3e-107unknown [Medicago truncatula]
JMFS071D09Sequence626012936 (36)gb|AFK35109.1|1e-107unknown [Medicago truncatula]
JMFS125E08Sequence565012936 (36)ref|XP_009769268.1|4e-55PREDICTED: pectinesterase-like [Nicotiana sylvestris]
JMFS151B07Sequence616012936 (36)ref|XP_009769268.1|5e-61PREDICTED: pectinesterase-like [Nicotiana sylvestris]
JMFS157H03Sequence596012936 (36)emb|CDO99717.1|3e-61unnamed protein product [Coffea canephora]

Contig 12936 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig012936============================================1857         
  39  -------------------------->JMFF048O21                                                                           
                                                                                             <----------rJMFF048O21  
  41  -------------------------------->JMFF003H10                                                                     
                                                                  <-------------------------------------rJMFF003H10  
  45  -------------------------------->JMFF009P17                                                                     
                                                                     <---------------------------------rJMFF009P17  
  50  --------------->JMFF048C10                                                                                      
                                                                                              <--------rJMFF048C10  
  53  ------------------------>JMFF023C01                                                                             
                                                                  <------------------------------------rJMFF023C01  
  55  -------------------------------->JMFF031E10                                                                     
                                                                       <-------------------------------rJMFF031E10  
  85 -------------------------------->JMFF037O17                                                                      
                                                               <------------------------------------rJMFF037O17  
 105  --------------------------------->JMFF044A13                                                                    
                                                                       <----------------------------rJMFF044A13  
 122  -------------------------------->JMFF017D22                                                                     
                                                                <----------------------------------rJMFF017D22  
1403                                                                           ------------------------->JMFF019I08   
                                                                               <-----------------------rJMFF019I08

The following clones don't have the opposite end in this pair.

      ------------------------------->JMFF022M21*                                                                     
                                       -------------------------------->JMFS071D08-                                   
                                -------------->JMFN007C16-                                                            
                                                           -------------------------------->JMFN039J05-               
                    --------------------------------->JMFS064A10-                                                     
                 ------------------------------->JMFS157H03-                                                          
       ----------------------------->JMFS125E08-                                                                      
      --------------------------->JMFF013C01#                                                                         
       ------------------------------->JMFS013F10-                                                                    
       --------------------------------->JMFS067G05-                                                                  
      ---------------------------->JMFF028B24-                                                                        
       -------------------------------->JMFS151B07-                                                                   
                                       -------------------------------->JMFS071D09-                                   
                                    ------------->JMFS035B12-                                                         
      ----------------------------->JMFF032O07-                                                                       
      ------------------------------>JMFF020D02-