clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005N16 | Sequence | 474 | 013399 (29) | ref|XP_006409426.1| | 1e-44 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | 721 | 013399 (29) | ref|XP_009804090.1| | 6e-69 | PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri |
JMFF007H22 | Sequence | 497 | 013399 (29) | ref|XP_006409426.1| | 1e-44 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | 705 | 013399 (29) | ref|XP_009804090.1| | 5e-69 | PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri |
JMFF014K12 | Sequence | 448 | 013399 (29) | ref|XP_006409426.1| | 3e-35 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | 719 | 013399 (29) | ref|XP_009804090.1| | 5e-69 | PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri |
JMFF017C04 | Sequence | 767 | 013399 (29) | ref|XP_006409426.1| | 1e-70 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | |||||
JMFF023F03 | Sequence | 496 | 013399 (29) | ref|XP_006409426.1| | 2e-46 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | 754 | 013399 (29) | ref|XP_006409426.1| | 4e-70 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo |
JMFF047D19 | Sequence | 621 | 013399 (29) | ref|XP_006409426.1| | 5e-70 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | 367 | 013399 (29) | gb|AAB09472.1| | 1e-07 | vacuolar H+-pumping ATPase 16 kDa proteolipid, partial [Arabidopsis thaliana] |
JMFF051N18 | Sequence | 553 | 013399 (29) | ref|XP_006409426.1| | 5e-62 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | 414 | 013399 (29) | gb|KCW64075.1| | 3e-07 | hypothetical protein EUGRSUZ_G01736 [Eucalyptus grandis] |
JMFN003H12 | Sequence | 628 | 013399 (29) | ref|XP_006409426.1| | 1e-71 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | |||||
JMFN007A07 | Sequence | 625 | 013399 (29) | ref|XP_006409426.1| | 1e-67 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | |||||
JMFN012M18 | Sequence | 590 | 013399 (29) | ref|XP_006409426.1| | 5e-61 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | |||||
JMFN018F06 | Sequence | 627 | 013399 (29) | ref|XP_006409426.1| | 4e-69 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | |||||
JMFN020M11 | Sequence | 601 | 013399 (29) | ref|XP_006409426.1| | 3e-69 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | |||||
JMFN028F12 | Sequence | 568 | 013399 (29) | ref|XP_006409426.1| | 7e-60 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | |||||
JMFN038C12 | Sequence | 617 | 013399 (29) | ref|XP_006409426.1| | 7e-67 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | |||||
JMFN042P07 | Sequence | 640 | 013399 (29) | ref|XP_006409426.1| | 8e-72 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | |||||
JMFS052G06 | Sequence | 599 | 013399 (29) | ref|XP_006409426.1| | 2e-46 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | |||||
JMSF005C07 | Sequence | 279 | 013399 (29) | ref|XP_006409426.1| | 1e-23 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | |||||
JMSF021F12 | Sequence | 695 | 013399 (29) | ref|XP_006409426.1| | 2e-71 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | 736 | 013399 (29) | ref|XP_006409426.1| | 9e-71 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo |
JMSF028G02 | Sequence | 654 | 013399 (29) | ref|XP_006409426.1| | 7e-70 | hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo | 674 | 013399 (29) | ref|XP_009804090.1| | 3e-69 | PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig013399============================================ 952 25 --------------------------------------------------------->JMFF051N18 <------------------------------------------rJMFF051N18 47 --------------------------------------------------->JMFF007H22 <------------------------------------------------------------------------rJMFF007H22 48 ------------------------------------------------->JMFF005N16 <--------------------------------------------------------------------------rJMFF005N16 56 ---------------------------------------------------------------->JMFF047D19 <-------------------------------------rJMFF047D19 67 -------------------------------------------------------------------->JMSF028G02 <----------------------------------------------------------------------rJMSF028G02 71 ------------------------------------->JMFF014K12 <---------------------------------------------------------------------------rJMFF014K12 92 ------------------------------------------------------------------------>JMSF021F12 <----------------------------------------------------------------------------rJMSF021F12 123 -------------------------------------------------->JMFF023F03 <------------------------------------------------------------------------------rJMFF023F03
The following clones don't have the opposite end in this pair.
----------------------------------------------------------------->JMFN003H12- ---------------------------------------------------------------->JMFN038C12- -------------------------------------------------------------->JMFN020M11- ---------------------------->JMSF005C07- <------------------------------------------------------------------------rJMSF018F05* ------------------------------------------------------------------>JMFN042P07- ------------------------------------------------------------->JMFN012M18- ------------------------------->JMSF001H15* ----------------------------------------------------------------->JMFN007A07- -------------------------------------------------------------->JMFN018F06- <-------------------------------------------------------------------------------rJMFF017C04- ----------------------------------------------------------->JMFN028F12- -------------------------------------------------------------->JMFS052G06-