List of clones in pair P018318.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005N16Sequence474013399 (29)ref|XP_006409426.1|1e-44hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo721013399 (29)ref|XP_009804090.1|6e-69PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri
JMFF007H22Sequence497013399 (29)ref|XP_006409426.1|1e-44hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo705013399 (29)ref|XP_009804090.1|5e-69PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri
JMFF014K12Sequence448013399 (29)ref|XP_006409426.1|3e-35hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo719013399 (29)ref|XP_009804090.1|5e-69PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri
JMFF017C04Sequence767013399 (29)ref|XP_006409426.1|1e-70hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMFF023F03Sequence496013399 (29)ref|XP_006409426.1|2e-46hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo754013399 (29)ref|XP_006409426.1|4e-70hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMFF047D19Sequence621013399 (29)ref|XP_006409426.1|5e-70hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo367013399 (29)gb|AAB09472.1|1e-07vacuolar H+-pumping ATPase 16 kDa proteolipid, partial [Arabidopsis thaliana]
JMFF051N18Sequence553013399 (29)ref|XP_006409426.1|5e-62hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo414013399 (29)gb|KCW64075.1|3e-07hypothetical protein EUGRSUZ_G01736 [Eucalyptus grandis]
JMFN003H12Sequence628013399 (29)ref|XP_006409426.1|1e-71hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMFN007A07Sequence625013399 (29)ref|XP_006409426.1|1e-67hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMFN012M18Sequence590013399 (29)ref|XP_006409426.1|5e-61hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMFN018F06Sequence627013399 (29)ref|XP_006409426.1|4e-69hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMFN020M11Sequence601013399 (29)ref|XP_006409426.1|3e-69hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMFN028F12Sequence568013399 (29)ref|XP_006409426.1|7e-60hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMFN038C12Sequence617013399 (29)ref|XP_006409426.1|7e-67hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMFN042P07Sequence640013399 (29)ref|XP_006409426.1|8e-72hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMFS052G06Sequence599013399 (29)ref|XP_006409426.1|2e-46hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMSF005C07Sequence279013399 (29)ref|XP_006409426.1|1e-23hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMSF021F12Sequence695013399 (29)ref|XP_006409426.1|2e-71hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo736013399 (29)ref|XP_006409426.1|9e-71hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo
JMSF028G02Sequence654013399 (29)ref|XP_006409426.1|7e-70hypothetical protein EUTSA_v10022840mg [Eutrema salsugineum] gb|ESQ50879.1| hypo674013399 (29)ref|XP_009804090.1|3e-69PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri

Contig 13399 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig013399============================================ 952         
  25    --------------------------------------------------------->JMFF051N18                                          
                                                              <------------------------------------------rJMFF051N18  
  47  --------------------------------------------------->JMFF007H22                                                  
                           <------------------------------------------------------------------------rJMFF007H22  
  48    ------------------------------------------------->JMFF005N16                                                  
                            <--------------------------------------------------------------------------rJMFF005N16  
  56     ---------------------------------------------------------------->JMFF047D19                                  
                                                                 <-------------------------------------rJMFF047D19  
  67 -------------------------------------------------------------------->JMSF028G02                                  
                           <----------------------------------------------------------------------rJMSF028G02  
  71      ------------------------------------->JMFF014K12                                                            
                           <---------------------------------------------------------------------------rJMFF014K12  
  92    ------------------------------------------------------------------------>JMSF021F12                           
                     <----------------------------------------------------------------------------rJMSF021F12  
 123    -------------------------------------------------->JMFF023F03                                                 
                <------------------------------------------------------------------------------rJMFF023F03  

The following clones don't have the opposite end in this pair.

         ----------------------------------------------------------------->JMFN003H12-                                
        ---------------------------------------------------------------->JMFN038C12-                                  
          -------------------------------------------------------------->JMFN020M11-                                  
             ---------------------------->JMSF005C07-                                                                 
                           <------------------------------------------------------------------------rJMSF018F05*      
          ------------------------------------------------------------------>JMFN042P07-                              
        ------------------------------------------------------------->JMFN012M18-                                     
          ------------------------------->JMSF001H15*                                                                 
        ----------------------------------------------------------------->JMFN007A07-                                 
          -------------------------------------------------------------->JMFN018F06-                                  
                     <-------------------------------------------------------------------------------rJMFF017C04-     
         ----------------------------------------------------------->JMFN028F12-                                      
          -------------------------------------------------------------->JMFS052G06-