List of clones in pair P018315.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001B20Sequence592000838 (14)ref|XP_010316764.1|3e-55PREDICTED: squamosa promoter-binding protein 1 isoform X2 [Solanum lycopersicum542000838 (14)gb|ABL89185.1|9e-47squamosa promoter binding protein-like protein [Capsicum annuum]
JMFF007C15Sequence532000838 (14)ref|XP_010316764.1|1e-55PREDICTED: squamosa promoter-binding protein 1 isoform X2 [Solanum lycopersicum714000838 (14)ref|XP_010316764.1|1e-54PREDICTED: squamosa promoter-binding protein 1 isoform X2 [Solanum lycopersicum
JMFF024G11Sequence525000838 (14)ref|XP_009602314.1|1e-37PREDICTED: squamosa promoter-binding protein 1-like isoform X2 [Nicotiana tomen495000838 (14)ref|XP_009602314.1|1e-37PREDICTED: squamosa promoter-binding protein 1-like isoform X2 [Nicotiana tomen
JMFF038J19Sequence580000838 (14)ref|XP_010316764.1|3e-55PREDICTED: squamosa promoter-binding protein 1 isoform X2 [Solanum lycopersicum727000838 (14)ref|XP_010316764.1|1e-54PREDICTED: squamosa promoter-binding protein 1 isoform X2 [Solanum lycopersicum
JMFF038K23Sequence591000838 (14)ref|XP_010316764.1|3e-55PREDICTED: squamosa promoter-binding protein 1 isoform X2 [Solanum lycopersicum713000838 (14)ref|XP_010316764.1|1e-54PREDICTED: squamosa promoter-binding protein 1 isoform X2 [Solanum lycopersicum
JMFN013E11Sequence611000838 (14)ref|XP_010316764.1|3e-55PREDICTED: squamosa promoter-binding protein 1 isoform X2 [Solanum lycopersicum
JMFN038B11Sequence528000838 (14)ref|XP_009602314.1|1e-52PREDICTED: squamosa promoter-binding protein 1-like isoform X2 [Nicotiana tomen
JMSF032O02Sequence690000838 (14)ref|XP_010316764.1|1e-54PREDICTED: squamosa promoter-binding protein 1 isoform X2 [Solanum lycopersicum735000838 (14)ref|XP_010316764.1|2e-54PREDICTED: squamosa promoter-binding protein 1 isoform X2 [Solanum lycopersicum

Contig 838 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000838============================================ 776         
  23 ---------------------------------------------------------------------------------------->JMSF032O02              
        <---------------------------------------------------------------------------------------------rJMSF032O02  
  63     -------------------------------------------------------------------------->JMFF038J19                        
         <-------------------------------------------------------------------------------------------rJMFF038J19  
  67      --------------------------------------------------------------------------->JMFF038K23                      
          <------------------------------------------------------------------------------------------rJMFF038K23  
  72      --------------------------------------------------------------------------->JMFF001B20                      
                               <---------------------------------------------------------------------rJMFF001B20  
  87     ----------------------------------------------------------------->JMFF007C15                                 
         <----------------------------------------------------------------------------------------rJMFF007C15  
 281                                 ------------------------------------------------------------------->JMFF024G11   
                                     <---------------------------------------------------------------rJMFF024G11

The following clones don't have the opposite end in this pair.

                   ------------------------------------------------------------------->JMFN038B11-                    
          ------------------------------------------------------------------------------>JMFN013E11-