clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001L11 | Sequence | 522 | 005453 (11) | ref|XP_011080600.1| | 4e-78 | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Sesamum indic | 743 | 005453 (11) | emb|CDP04012.1| | 2e-70 | unnamed protein product [Coffea canephora] |
JMFF030F10 | Sequence | 527 | 005453 (11) | ref|XP_011080600.1| | 2e-79 | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Sesamum indic | 708 | 005453 (11) | emb|CDP04012.1| | 5e-69 | unnamed protein product [Coffea canephora] |
JMFN031H01 | Sequence | 625 | 005453 (11) | emb|CDP04012.1| | 9e-85 | unnamed protein product [Coffea canephora] | |||||
JMSF003E14 | Sequence | 411 | 005453 (11) | ref|XP_010274755.1| | 9e-55 | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Nelumbo nucif | 740 | 005453 (11) | emb|CDP04012.1| | 2e-124 | unnamed protein product [Coffea canephora] |
JMSF010C16 | Sequence | 244 | 005453 (11) | 763 | 005453 (11) | emb|CDP04012.1| | 9e-130 | unnamed protein product [Coffea canephora] | |||
JMSF025D15 | Sequence | 699 | 005453 (11) | ref|XP_006344362.1| | 3e-126 | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like isoform X1 [So | 756 | 005453 (11) | emb|CDP04012.1| | 8e-151 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005453============================================1528 76 --------------------------------->JMFF030F10 <---------------------------------------------rJMFF030F10 98 --------------------------------->JMFF001L11 <-----------------------------------------------rJMFF001L11 183 --------------->JMSF010C16 <-------------------------------------------------rJMSF010C16 269 -------------------------->JMSF003E14 <-----------------------------------------------rJMSF003E14 382 --------------------------------------------->JMSF025D15 <-----------------------------------------------rJMSF025D15
The following clones don't have the opposite end in this pair.
<--------------------------------------JMFN031H01-