| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF007A24 | Sequence | 550 | 004987 (28) | dbj|BAP91041.1| | 5e-78 | glyceraldehyde 3-phosphate dehydrogenase-A [Nicotiana benthamiana] | 667 | 004987 (28) | gb|ABW89104.1| | 4e-70 | glyceraldehyde-3-phosphate dehydrogenase, partial [Helianthus annuus] |
| JMFF016H04 | Sequence | 533 | 004987 (28) | dbj|BAP91041.1| | 6e-74 | glyceraldehyde 3-phosphate dehydrogenase-A [Nicotiana benthamiana] | 703 | 004987 (28) | gb|ABW89104.1| | 1e-79 | glyceraldehyde-3-phosphate dehydrogenase, partial [Helianthus annuus] |
| JMFF023H10 | Sequence | 502 | 004987 (28) | dbj|BAP91041.1| | 7e-68 | glyceraldehyde 3-phosphate dehydrogenase-A [Nicotiana benthamiana] | 709 | 004987 (28) | gb|ABW89104.1| | 1e-81 | glyceraldehyde-3-phosphate dehydrogenase, partial [Helianthus annuus] |
| JMFS002H02 | Sequence | 415 | 004987 (28) | dbj|BAP91041.1| | 3e-52 | glyceraldehyde 3-phosphate dehydrogenase-A [Nicotiana benthamiana] | |||||
| JMFS079F11 | Sequence | 617 | 004987 (28) | gb|AEH04452.1| | 9e-105 | glyceraldehyde-3-phosphate dehydrogenase [Arachis hypogaea] | |||||
| JMSF008O09 | Sequence | 213 | 004987 (28) | 717 | 004987 (28) | gb|KDO63479.1| | 8e-101 | hypothetical protein CISIN_1g013492mg [Citrus sinensis] | |||
| JMSF013J06 | Sequence | 557 | 004987 (28) | dbj|BAP91041.1| | 8e-80 | glyceraldehyde 3-phosphate dehydrogenase-A [Nicotiana benthamiana] | 757 | 004987 (28) | gb|KDO63479.1| | 2e-99 | hypothetical protein CISIN_1g013492mg [Citrus sinensis] |
| JMSF015E08 | Sequence | 265 | 004987 (28) | emb|CDP18560.1| | 8e-12 | unnamed protein product [Coffea canephora] | 777 | 004987 (28) | gb|KDO63479.1| | 4e-99 | hypothetical protein CISIN_1g013492mg [Citrus sinensis] |
| JMSF019D02 | Sequence | 380 | 004987 (28) | emb|CDP18560.1| | 1e-39 | unnamed protein product [Coffea canephora] | 774 | 004987 (28) | gb|KDO63479.1| | 1e-128 | hypothetical protein CISIN_1g013492mg [Citrus sinensis] |
| JMSF020H01 | Sequence | 589 | 004987 (28) | dbj|BAP91041.1| | 3e-87 | glyceraldehyde 3-phosphate dehydrogenase-A [Nicotiana benthamiana] | 757 | 004987 (28) | gb|KJB11770.1| | 2e-90 | hypothetical protein B456_001G276400 [Gossypium raimondii] |
| JMSF038D18 | Sequence | 696 | 004987 (28) | ref|XP_009800449.1| | 9e-114 | PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [Nicotiana | 897 | 004987 (28) | gb|KDO63479.1| | 6e-127 | hypothetical protein CISIN_1g013492mg [Citrus sinensis] |
| JMSF039G21 | Sequence | 701 | 004987 (28) | ref|XP_009800449.1| | 3e-115 | PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [Nicotiana | 839 | 004987 (28) | gb|KJB11770.1| | 5e-113 | hypothetical protein B456_001G276400 [Gossypium raimondii] |
| JMSF040F03 | Sequence | 651 | 004987 (28) | dbj|BAP91041.1| | 3e-104 | glyceraldehyde 3-phosphate dehydrogenase-A [Nicotiana benthamiana] | 873 | 004987 (28) | ref|XP_006446865.1| | 9e-137 | hypothetical protein CICLE_v10015476mg [Citrus clementina] gb|ESR60105.1| hypoth |
| JMSF049I02 | Sequence | 656 | 004987 (28) | dbj|BAP91041.1| | 4e-104 | glyceraldehyde 3-phosphate dehydrogenase-A [Nicotiana benthamiana] | 712 | 004987 (28) | gb|ABW89104.1| | 2e-74 | glyceraldehyde-3-phosphate dehydrogenase, partial [Helianthus annuus] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig004987============================================1430 12 ---------------------------------->JMFF023H10 <-------------------------------------------------rJMFF023H10 12 ------------------------------------>JMFF016H04 <------------------------------------------------rJMFF016H04 15 ------------------------------------------------>JMSF039G21 <---------------------------------------------------------rJMSF039G21 18 ----------------->JMSF015E08 <-----------------------------------------------------rJMSF015E08 18 --------------------------------------------->JMSF049I02 <------------------------------------------------rJMSF049I02 23 ------------------------------------------------>JMSF038D18 <-------------------------------------------------------------rJMSF038D18 25 ---------------------------------------->JMSF020H01 <----------------------------------------------------rJMSF020H01 26 -------------------------------------->JMSF013J06 <----------------------------------------------------rJMSF013J06 55 ------------------------------------->JMFF007A24 <---------------------------------------------rJMFF007A24 70 -------------->JMSF008O09 <-------------------------------------------------rJMSF008O09 73 --------------------------------------------->JMSF040F03 <------------------------------------------------------------rJMSF040F03 126 ------------------------->JMSF019D02 <-----------------------------------------------------rJMSF019D02
The following clones don't have the opposite end in this pair.
-------------------------------------->JMSF029F03* ---------------------------->JMFS002H02- ------------------------------------------>JMFS079F11- --------------------------------------------------->JMSF045C13*