List of clones in pair P018243.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002N16Sequence535011464 (26)emb|CDP15354.1|3e-75unnamed protein product [Coffea canephora]
JMFF004B12Sequence584011464 (26)emb|CBI30239.3|3e-112unnamed protein product [Vitis vinifera]718011464 (26)ref|XP_009623014.1|8e-14PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis
JMFF005N12Sequence411011464 (26)emb|CDP15354.1|2e-70unnamed protein product [Coffea canephora]705011464 (26)ref|XP_009623014.1|1e-13PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis
JMFF007L12Sequence548011464 (26)emb|CBI30239.3|6e-102unnamed protein product [Vitis vinifera]785011464 (26)ref|XP_009623014.1|1e-13PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis
JMFF014K10Sequence537011464 (26)emb|CBI30239.3|1e-98unnamed protein product [Vitis vinifera]808011464 (26)ref|XP_009623014.1|2e-13PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis
JMFF018M03Sequence534011464 (26)emb|CBI30239.3|7e-99unnamed protein product [Vitis vinifera]849011464 (26)ref|XP_009623014.1|8e-18PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis
JMFF019I23Sequence582011464 (26)emb|CBI30239.3|3e-112unnamed protein product [Vitis vinifera]719011464 (26)ref|XP_009623014.1|1e-13PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis
JMFF021A08Sequence580011464 (26)emb|CBI30239.3|2e-112unnamed protein product [Vitis vinifera]763011464 (26)ref|XP_009623014.1|1e-13PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis
JMFF024E20Sequence446011464 (26)emb|CDP15354.1|4e-79unnamed protein product [Coffea canephora]778011464 (26)ref|XP_009623014.1|5e-14PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis
JMFF040B13Sequence574011464 (26)ref|XP_009623014.1|7e-16PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis
JMFF041F23Sequence629011464 (26)ref|XP_006339114.1|2e-120PREDICTED: splicing factor U2af small subunit B-like [Solanum tuberosum]640011464 (26)ref|XP_009623014.1|1e-17PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis
JMFF041H10Sequence657011464 (26)ref|XP_006339114.1|4e-121PREDICTED: splicing factor U2af small subunit B-like [Solanum tuberosum]600011464 (26)ref|XP_009623014.1|4e-10PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis
JMFN018I07Sequence610011464 (26)ref|XP_010683884.1|4e-110PREDICTED: splicing factor U2af small subunit B-like [Beta vulgaris subsp. vulg
JMFS051E11Sequence580011464 (26)ref|XP_006339114.1|1e-119PREDICTED: splicing factor U2af small subunit B-like [Solanum tuberosum]
JMSF014B16Sequence326011464 (26)emb|CDP15354.1|3e-50unnamed protein product [Coffea canephora]849011464 (26)ref|XP_009623014.1|2e-13PREDICTED: splicing factor U2af small subunit B-like [Nicotiana tomentosiformis

Contig 11464 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig011464============================================1545         
  91       ------------------------->JMFF041F23                                                                       
                                                                <----------------------------------------rJMFF041F23  
  94       ------------------------------------------>JMFF041H10                                                      
                                                                  <--------------------------------------rJMFF041H10  
 112       -------------------------->JMFF005N12                                                                      
                                                           <--------------------------------------------rJMFF005N12  
 114       ---------------------------------->JMFF018M03                                                              
                                                <------------------------------------------------------rJMFF018M03  
 119       ---------------------------------->JMFF014K10                                                              
                                                   <---------------------------------------------------rJMFF014K10  
 119       ------------------------------------->JMFF004B12                                                           
                                                         <---------------------------------------------rJMFF004B12  
 119       ------------------------------------->JMFF019I23                                                           
                                                         <---------------------------------------------rJMFF019I23  
 136       -------------------->JMSF014B16                                                                            
                                                <------------------------------------------------------rJMSF014B16  
 201       ---------------------------------->JMFF007L12                                                              
                                                <-------------------------------------------------rJMFF007L12  
 217       ---------------------------->JMFF024E20                                                                    
                                                <------------------------------------------------rJMFF024E20  
 217       ------------------------------------->JMFF021A08                                                           
                                                <------------------------------------------------rJMFF021A08

The following clones don't have the opposite end in this pair.

             ------------------------------------->JMFS051E11-                                                        
     --------------------------------->JMFF002N16-                                                                    
                                                           <------------------------------------rJMFF040B13-          
                 <---------------------------------------JMFN018I07-