List of clones in pair P018238.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007K15Sequence589000871 (39)ref|XP_004249099.1|1e-102PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch
JMFF015O23Sequence502000871 (39)ref|XP_004249099.1|9e-78PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch
JMFF016E02Sequence608000871 (39)ref|XP_006364756.1|4e-107PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch
JMFF025H14Sequence581000871 (39)ref|XP_006364756.1|2e-100PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch760000871 (39)gb|AAB19120.1|2e-154PNIL34 [Ipomoea nil]
JMFF026A15Sequence529000871 (39)ref|XP_004249099.1|3e-86PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch705000871 (39)gb|AAB19120.1|3e-138PNIL34 [Ipomoea nil]
JMFF051P08Sequence541000871 (39)ref|XP_004249099.1|2e-89PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch475000871 (39)gb|AAB19120.1|3e-64PNIL34 [Ipomoea nil]
JMFN003P01Sequence623000871 (39)ref|XP_006364756.1|6e-117PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch
JMFN012N21Sequence627000871 (39)gb|AAB19120.1|3e-152PNIL34 [Ipomoea nil]
JMFN013A07Sequence642000871 (39)ref|XP_006364756.1|8e-121PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch
JMFN013I18Sequence641000871 (39)gb|AAB19120.1|1e-145PNIL34 [Ipomoea nil]
JMFN016A19Sequence466000871 (39)gb|AAB19120.1|7e-62PNIL34 [Ipomoea nil]
JMFN031L24Sequence572000871 (39)ref|XP_004249099.1|2e-93PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch
JMFN038L03Sequence608000871 (39)emb|CDY27178.1|2e-92BnaA09g36240D [Brassica napus]
JMFN043C13Sequence635000871 (39)ref|XP_007028373.1|6e-150Dicarboxylate diiron protein isoform 2 [Theobroma cacao] gb|EOY08875.1| Dicarbox
JMSF005H07Sequence353000871 (39)ref|XP_010251762.1|6e-32PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch
JMSF006H19Sequence369000871 (39)ref|XP_004249099.1|4e-41PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch
JMSF013H19Sequence230000871 (39)ref|XP_004249099.1|8e-13PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch717000871 (39)gb|AAB19120.1|6e-144PNIL34 [Ipomoea nil]
JMSF015D14Sequence371000871 (39)ref|XP_010251762.1|1e-37PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch756000871 (39)gb|AAB19120.1|2e-154PNIL34 [Ipomoea nil]
JMSF015N14Sequence232000871 (39)ref|XP_004249099.1|8e-14PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch713000871 (39)gb|AAB19120.1|6e-144PNIL34 [Ipomoea nil]
JMSF022H04Sequence611000871 (39)ref|XP_004249099.1|7e-108PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch760000871 (39)gb|AAB19120.1|9e-136PNIL34 [Ipomoea nil]
JMSF036F10Sequence678000871 (39)gb|ACJ85380.1|1e-112unknown [Medicago truncatula]701000871 (39)gb|AAB19120.1|4e-137PNIL34 [Ipomoea nil]
JMSF036P03Sequence691000871 (39)ref|XP_004249099.1|5e-129PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch709000871 (39)gb|AAB19120.1|3e-143PNIL34 [Ipomoea nil]
JMSF045M22Sequence713000871 (39)ref|XP_004249099.1|3e-134PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch690000871 (39)gb|AAB19120.1|4e-90PNIL34 [Ipomoea nil]
JMSF046L01Sequence770000871 (39)ref|XP_006364756.1|2e-151PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch827000871 (39)gb|AAB19120.1|8e-117PNIL34 [Ipomoea nil]
JMSF047I22Sequence703000871 (39)ref|XP_006364756.1|2e-125PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, ch707000871 (39)gb|AAB19120.1|6e-108PNIL34 [Ipomoea nil]

Contig 871 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000871============================================1499         
   7 -------------------------------------------------->JMSF046L01                                                    
                                                  <------------------------------------------------------rJMSF046L01  
  77  -------------------------------------->JMSF022H04                                                               
                                                  <--------------------------------------------------rJMSF022H04  
 100 ----------------------------------->JMFF051P08                                                                   
                                                                   <-------------------------------rJMFF051P08  
 124 ---------------------------------->JMFF026A15                                                                    
                                                  <----------------------------------------------rJMFF026A15  
 132 -------------------------------------------->JMSF036F10                                                          
                                                  <---------------------------------------------rJMSF036F10  
 134 -------------------------------------->JMFF025H14                                                                
                                              <--------------------------------------------------rJMFF025H14  
 136 ---------------------------------------------->JMSF045M22                                                        
                                                                <-------------------------------rJMSF045M22  
 138 -------------->JMSF015N14                                                                                        
                                                <-----------------------------------------------rJMSF015N14  
 139 --------------------------------------------->JMSF036P03                                                         
                                                 <----------------------------------------------rJMSF036P03  
 142  ------------------------>JMSF015D14                                                                             
                                              <--------------------------------------------------rJMSF015D14  
 142 ---------------------------------------------->JMSF047I22                                                        
                                                 <----------------------------------------------rJMSF047I22  
 151 -------------->JMSF013H19                                                                                        
                                                <----------------------------------------------rJMSF013H19

The following clones don't have the opposite end in this pair.

                                                  ---------------------------------------->JMFN038L03-                
              ------------------------------------------>JMFN013I18-                                                  
                                                                    ------------------------------>JMFN016A19-        
     ---------------------->JMSF005H07-                                                                               
                                           ----------------------------------------->JMFN012N21-                      
                                                <-----------------------------------------------rJMSF042F03*          
     -------------------------------->JMFF015O23-                                                                     
       ------------------------------------->JMFN031L24-                                                              
       ------------------------------------------>JMFN013A07-                                                         
     ---------------------------------------->JMFF016E02-                                                             
                   ----------------------------------------->JMFN043C13-                                              
     ------------------------------->JMSF034E03*                                                                      
     -------------------------------------->JMFF007K15-                                                               
      ----------------------->JMSF006H19-                                                                             
       ----------------------------------------->JMFN003P01-