clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF018J10 | Sequence | 616 | 012870 (9) | emb|CAJ91152.1| | 1e-56 | D-3-phosphoglycerate dehydrogenase [Platanus x acerifolia] | 654 | 012870 (9) | ref|XP_011072722.1| | 1e-104 | PREDICTED: D-3-phosphoglycerate dehydrogenase 2, chloroplastic-like [Sesamum in |
JMFF024O08 | Sequence | 451 | 012870 (9) | ref|XP_009610991.1| | 2e-35 | PREDICTED: D-3-phosphoglycerate dehydrogenase 2, chloroplastic [Nicotiana tomen | 817 | 012870 (9) | ref|XP_011072722.1| | 6e-110 | PREDICTED: D-3-phosphoglycerate dehydrogenase 2, chloroplastic-like [Sesamum in |
JMFF042K14 | Sequence | 659 | 012870 (9) | emb|CAJ91152.1| | 2e-83 | D-3-phosphoglycerate dehydrogenase [Platanus x acerifolia] | 592 | 012870 (9) | ref|XP_011072722.1| | 2e-77 | PREDICTED: D-3-phosphoglycerate dehydrogenase 2, chloroplastic-like [Sesamum in |
JMFS036H02 | Sequence | 500 | 012870 (9) | emb|CBI25279.3| | 7e-104 | unnamed protein product [Vitis vinifera] | |||||
JMFS120F04 | Sequence | 642 | 012870 (9) | ref|XP_009610991.1| | 6e-101 | PREDICTED: D-3-phosphoglycerate dehydrogenase 2, chloroplastic [Nicotiana tomen | |||||
JMFS161D04 | Sequence | 584 | 012870 (9) | ref|XP_011072722.1| | 6e-70 | PREDICTED: D-3-phosphoglycerate dehydrogenase 2, chloroplastic-like [Sesamum in |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012870============================================2173 56 --------------------------->JMFF018J10 <-----------------------------rJMFF018J10 70 ----------------------------->JMFF042K14 <--------------------------rJMFF042K14 133 -------------------->JMFF024O08 <------------------------------------rJMFF024O08
The following clones don't have the opposite end in this pair.
----------------------------->JMFS120F04- ------------------------->JMFS161D04- --------------------->JMFS036H02-