clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF013P02 | Sequence | 527 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] | |||||
JMFF021I16 | Sequence | 527 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] | 620 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] |
JMFF021K12 | Sequence | 421 | 000833 (20) | ref|XP_004233121.2| | 160 | PREDICTED: uncharacterized protein LOC101247392 [Solanum lycopersicum] | 586 | 000833 (20) | ref|XP_009617920.1| | 180 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] |
JMFF035L08 | Sequence | 639 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] | 623 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] |
JMFN019J19 | Sequence | 623 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] | |||||
JMFN035P23 | Sequence | 629 | 000833 (20) | ref|XP_009617920.1| | 203 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] | |||||
JMFN036P16 | Sequence | 516 | 000833 (20) | ref|XP_009617920.1| | 202 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] | |||||
JMFN042E03 | Sequence | 615 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] | |||||
JMSF001C12 | Sequence | 257 | 000833 (20) | ref|XP_004233121.2| | 100 | PREDICTED: uncharacterized protein LOC101247392 [Solanum lycopersicum] | 690 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] |
JMSF032B23 | Sequence | 659 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] | 599 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] |
JMSF032O15 | Sequence | 657 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] | 599 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] |
JMSF043E06 | Sequence | 765 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] | 725 | 000833 (20) | ref|XP_009617920.1| | 206 | PREDICTED: uncharacterized protein LOC104110180 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000833============================================ 765 47 --------------------------------------------------------------------------------------------------->JMSF043E06 <---------------------------------------------------------------------------------------------rJMSF043E06 48 ------------------------------------------------------>JMFF021K12 <--------------------------------------------------------------------------rJMFF021K12 75 --------------------------------->JMSF001C12 <-----------------------------------------------------------------------------------------rJMSF001C12 142 ----------------------------------------------------------------------------------->JMFF035L08 <--------------------------------------------------------------------------------rJMFF035L08 149 ------------------------------------------------------------------->JMFF021I16 <--------------------------------------------------------------------------------rJMFF021I16 166 ------------------------------------------------------------------------------------>JMSF032B23 <-----------------------------------------------------------------------------rJMSF032B23 166 ------------------------------------------------------------------------------------>JMSF032O15 <-----------------------------------------------------------------------------rJMSF032O15
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------>JMFN036P16- ------------------------------------------------------------------->JMFF013P02- -------------------------------------------------------------------------------->JMFN019J19- <----------------------------------------------rJMSF006O21* ------------------------------------------------------------------------------->JMFN042E03- --------------------------------------------------------------------------------->JMFN035P23-