| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF009O05 | Sequence | 596 | 004483 (15) | ref|XP_004235993.1| | 5e-84 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Solanum lycoper | 672 | 004483 (15) | ref|XP_004235993.1| | 1e-138 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Solanum lycoper |
| JMFF025L17 | Sequence | 481 | 004483 (15) | ref|XP_004235993.1| | 2e-76 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Solanum lycoper | 732 | 004483 (15) | ref|XP_006364592.1| | 3e-112 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like [Solanum tu |
| JMFF036F20 | Sequence | 578 | 004483 (15) | ref|XP_004235993.1| | 3e-84 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Solanum lycoper | 578 | 004483 (15) | ref|XP_006364592.1| | 7e-103 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like [Solanum tu |
| JMFN012H15 | Sequence | 621 | 004483 (15) | ref|XP_009614782.1| | 3e-88 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Nicotiana tomen | |||||
| JMFN015M04 | Sequence | 630 | 004483 (15) | gb|AHA58683.1| | 7e-124 | geranylgeranyl reductase [Nicotiana tabacum] | |||||
| JMFN016M01 | Sequence | 639 | 004483 (15) | ref|XP_004235993.1| | 8e-131 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Solanum lycoper | |||||
| JMFN030B08 | Sequence | 566 | 004483 (15) | ref|XP_004235993.1| | 4e-86 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Solanum lycoper | |||||
| JMFN040E07 | Sequence | 642 | 004483 (15) | ref|XP_006364592.1| | 6e-135 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like [Solanum tu | |||||
| JMFS035E07 | Sequence | 562 | 004483 (15) | ref|XP_004235993.1| | 3e-84 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Solanum lycoper | |||||
| JMSF009F05 | Sequence | 230 | 004483 (15) | ref|XP_004235993.1| | 2e-14 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Solanum lycoper | 544 | 004483 (15) | ref|XP_004235993.1| | 1e-81 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Solanum lycoper |
| JMSF028A08 | Sequence | 189 | 004483 (15) | ref|XP_004235993.1| | 2e-14 | PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Solanum lycoper | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig004483============================================1582 19 ------------->JMSF009F05 <---------------------------------rJMSF009F05 72 ------------------------------------->JMFF009O05 <------------------------------------------rJMFF009O05 84 ----------------------------->JMFF025L17 <--------------------------------------------rJMFF025L17 84 ------------------------------------>JMFF036F20 <-----------------------------------rJMFF036F20
The following clones don't have the opposite end in this pair.
----------->JMSF028A08- -------------------------------------->JMFN012H15- --------------------------------------->JMFN015M04- ----------------------------------->JMFS035E07- ---------------------------------------->JMFN016M01- ---------------------------------------->JMFN040E07- ---------------------------------->JMFN030B08-