List of clones in pair P017967.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002I03Sequence519013562 (17)ref|XP_008679872.1|1e-85PREDICTED: 40S ribosomal protein S8-like [Zea mays]790013562 (17)ref|NP_001105391.1|1e-12440S ribosomal protein S8 [Zea mays] ref|XP_008679873.1| PREDICTED: 40S ribosomal
JMFF004B22Sequence515013562 (17)ref|XP_008679872.1|1e-88PREDICTED: 40S ribosomal protein S8-like [Zea mays]317013562 (17)gb|KJB81683.1|7e-27hypothetical protein B456_013G156600 [Gossypium raimondii]
JMFF008A07Sequence499013562 (17)ref|XP_008679872.1|1e-88PREDICTED: 40S ribosomal protein S8-like [Zea mays]729013562 (17)ref|NP_001105391.1|2e-11140S ribosomal protein S8 [Zea mays] ref|XP_008679873.1| PREDICTED: 40S ribosomal
JMFF026J24Sequence496013562 (17)ref|XP_008679872.1|1e-88PREDICTED: 40S ribosomal protein S8-like [Zea mays]761013562 (17)ref|NP_001105391.1|2e-12140S ribosomal protein S8 [Zea mays] ref|XP_008679873.1| PREDICTED: 40S ribosomal
JMFF037G02Sequence757013562 (17)ref|NP_001105391.1|6e-12040S ribosomal protein S8 [Zea mays] ref|XP_008679873.1| PREDICTED: 40S ribosomal
JMFN004L17Sequence642013562 (17)ref|XP_008679872.1|4e-115PREDICTED: 40S ribosomal protein S8-like [Zea mays]
JMFN028B15Sequence494013562 (17)gb|KHF98591.1|9e-5040S ribosomal S8 [Gossypium arboreum]
JMSF019K16Sequence511013562 (17)ref|XP_008679872.1|2e-71PREDICTED: 40S ribosomal protein S8-like [Zea mays]761013562 (17)gb|KHF98591.1|7e-9540S ribosomal S8 [Gossypium arboreum]
JMSF039M01Sequence657013562 (17)ref|XP_008679872.1|2e-115PREDICTED: 40S ribosomal protein S8-like [Zea mays]884013562 (17)ref|XP_008679872.1|7e-125PREDICTED: 40S ribosomal protein S8-like [Zea mays]
JMSF049P06Sequence684013562 (17)ref|XP_008679872.1|2e-122PREDICTED: 40S ribosomal protein S8-like [Zea mays]743013562 (17)ref|NP_001105391.1|7e-12140S ribosomal protein S8 [Zea mays] ref|XP_008679873.1| PREDICTED: 40S ribosomal

Contig 13562 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig013562============================================ 855         
   4 --------------------------------------------------------->JMFF008A07                                             
                  <-------------------------------------------------------------------------------------rJMFF008A07  
  12  --------------------------------------------------------->JMFF026J24                                            
              <-----------------------------------------------------------------------------------------rJMFF026J24  
  32 -------------------------------------------------------------------------------->JMSF049P06                      
              <--------------------------------------------------------------------------------------rJMSF049P06  
  64        -------------------------------------------------->JMFF002I03                                             
            <---------------------------------------------------------------------------------------------rJMFF002I03  
  89        -------------------------------------------------->JMSF019K16                                             
            <-----------------------------------------------------------------------------------------rJMSF019K16  
 105        -------------------------------------------------->JMFF004B22                                             
                                                               <------------------------------------rJMFF004B22  
 136  ----------------------------------------------------------------------------->JMSF039M01                        
      <-----------------------------------------------------------------------------------rJMSF039M01

The following clones don't have the opposite end in this pair.

       --------------------------------------------------------------------------->JMFN004L17-                        
              <-----------------------------------------------------------------------------------------rJMFF037G02-  
                                                ----------------------------------------->JMFN028B15-